RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 ARHGEF11O15085 1522 aa25.79■■□□□ 1.72
LINC00221-201ENST00000603633 PRG4Q92954 1404 aaPredicted RBP25.72■■□□□ 1.71
LINC00221-201ENST00000603633 RIMBP3CA6NJZ7 1639 aa25.68■■□□□ 1.7
LINC00221-201ENST00000603633 RIMBP3BA6NNM3 1639 aa25.68■■□□□ 1.7
LINC00221-201ENST00000603633 SHROOM2Q13796 1616 aa25.68■■□□□ 1.7
LINC00221-201ENST00000603633 RIMBP3Q9UFD9 1639 aa25.68■■□□□ 1.7
LINC00221-201ENST00000603633 KIF21BO75037 1637 aa25.67■■□□□ 1.7
LINC00221-201ENST00000603633 IQGAP2Q13576 1575 aa25.66■■□□□ 1.7
LINC00221-201ENST00000603633 CYB5RLQ6IPT4 315 aa25.65■■□□□ 1.7
LINC00221-201ENST00000603633 GOLGA3Q08378 1498 aa25.64■■□□□ 1.7
LINC00221-201ENST00000603633 UBTFP17480 764 aaKnown RBP25.64■■□□□ 1.69
LINC00221-201ENST00000603633 CARMIL2Q6F5E8 1435 aa25.64■■□□□ 1.69
LINC00221-201ENST00000603633 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
LINC00221-201ENST00000603633 UGGT2Q9NYU1 1516 aa25.58■■□□□ 1.69
LINC00221-201ENST00000603633 EHMT2Q96KQ7 1210 aa25.57■■□□□ 1.68
LINC00221-201ENST00000603633 ERCC6L2Q5T890 1561 aa25.54■■□□□ 1.68
LINC00221-201ENST00000603633 TNIKQ9UKE5 1360 aa25.52■■□□□ 1.68
LINC00221-201ENST00000603633 PTPRGP23470 1445 aa25.49■■□□□ 1.67
LINC00221-201ENST00000603633 DISP1Q96F81 1524 aa25.49■■□□□ 1.67
LINC00221-201ENST00000603633 CTTNBP2Q8WZ74 1663 aa25.48■■□□□ 1.67
LINC00221-201ENST00000603633 RANGAP1P46060 587 aaPredicted RBP25.42■■□□□ 1.66
LINC00221-201ENST00000603633 TTBK1Q5TCY1 1321 aaPredicted RBP25.4■■□□□ 1.66
LINC00221-201ENST00000603633 KIAA0556O60303 1618 aa25.39■■□□□ 1.66
LINC00221-201ENST00000603633 P3H3Q8IVL6 736 aa25.37■■□□□ 1.65
LINC00221-201ENST00000603633 NPM1P06748 294 aaKnown RBP eCLIP25.32■■□□□ 1.64
LINC00221-201ENST00000603633 EFCAB5A4FU69 1503 aa25.32■■□□□ 1.64
LINC00221-201ENST00000603633 UACAQ9BZF9 1416 aa25.3■■□□□ 1.64
LINC00221-201ENST00000603633 SAMD9Q5K651 1589 aa25.29■■□□□ 1.64
LINC00221-201ENST00000603633 LOC105371045A0A1W2PR82 267 aa25.29■■□□□ 1.64
LINC00221-201ENST00000603633 UHRF1BP1LA0JNW5 1464 aa25.25■■□□□ 1.63
LINC00221-201ENST00000603633 FHOD3Q2V2M9 1422 aa25.24■■□□□ 1.63
LINC00221-201ENST00000603633 ARHGAP35Q9NRY4 1499 aa25.22■■□□□ 1.63
LINC00221-201ENST00000603633 CLIP1P30622 1438 aa25.21■■□□□ 1.63
LINC00221-201ENST00000603633 ABCC2Q92887 1545 aa25.18■■□□□ 1.62
LINC00221-201ENST00000603633 PLB1Q6P1J6 1458 aa25.18■■□□□ 1.62
LINC00221-201ENST00000603633 FMN1Q68DA7 1419 aa25.17■■□□□ 1.62
LINC00221-201ENST00000603633 ADCY10Q96PN6 1610 aa25.14■■□□□ 1.62
LINC00221-201ENST00000603633 CEP162Q5TB80 1403 aa25.12■■□□□ 1.61
LINC00221-201ENST00000603633 ABCA8O94911 1581 aa25.12■■□□□ 1.61
LINC00221-201ENST00000603633 KDM5BQ9UGL1 1544 aa25.1■■□□□ 1.61
LINC00221-201ENST00000603633 TRHP20396 242 aaPredicted RBP25.07■■□□□ 1.6
LINC00221-201ENST00000603633 MAPKBP1O60336 1514 aa25.04■■□□□ 1.6
LINC00221-201ENST00000603633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.01■■□□□ 1.59
LINC00221-201ENST00000603633 HNRNPUL2Q1KMD3 747 aaKnown RBP25.01■■□□□ 1.59
LINC00221-201ENST00000603633 ATP1B4Q9UN42 357 aaPredicted RBP25.01■■□□□ 1.59
LINC00221-201ENST00000603633 RAPGEF6Q8TEU7 1601 aa25■■□□□ 1.59
LINC00221-201ENST00000603633 ATP10BO94823 1461 aa25■■□□□ 1.59
LINC00221-201ENST00000603633 ASXL2Q76L83 1435 aa25■■□□□ 1.59
LINC00221-201ENST00000603633 NUP153P49790 1475 aaKnown RBP24.98■■□□□ 1.59
LINC00221-201ENST00000603633 ARID3CA6NKF2 412 aa24.98■■□□□ 1.59
LINC00221-201ENST00000603633 CASKIN1Q8WXD9 1431 aa24.95■■□□□ 1.59
LINC00221-201ENST00000603633 ABCC10Q5T3U5 1492 aa24.94■■□□□ 1.58
LINC00221-201ENST00000603633 FAM69CQ0P6D2 419 aa24.94■■□□□ 1.58
LINC00221-201ENST00000603633 PLEKHD1A6NEE1 506 aa24.92■■□□□ 1.58
LINC00221-201ENST00000603633 CDK11AQ9UQ88 783 aaPredicted RBP24.92■■□□□ 1.58
LINC00221-201ENST00000603633 ZCCHC11Q5TAX3 1644 aaKnown RBP24.91■■□□□ 1.58
LINC00221-201ENST00000603633 WDR7Q9Y4E6 1490 aa24.9■■□□□ 1.58
LINC00221-201ENST00000603633 HECW1Q76N89 1606 aa24.88■■□□□ 1.57
LINC00221-201ENST00000603633 FYCO1Q9BQS8 1478 aa24.87■■□□□ 1.57
LINC00221-201ENST00000603633 EPRSP07814 1512 aaKnown RBP24.86■■□□□ 1.57
LINC00221-201ENST00000603633 KCNH8Q96L42 1107 aa24.85■■□□□ 1.57
LINC00221-201ENST00000603633 CCDC18Q5T9S5 1454 aa24.83■■□□□ 1.57
LINC00221-201ENST00000603633 VPS8Q8N3P4 1428 aa24.82■■□□□ 1.56
LINC00221-201ENST00000603633 PCF11O94913 1555 aaKnown RBP24.79■■□□□ 1.56
LINC00221-201ENST00000603633 DIP2BQ9P265 1576 aa24.78■■□□□ 1.56
LINC00221-201ENST00000603633 CDK13Q14004 1512 aaKnown RBP24.78■■□□□ 1.56
LINC00221-201ENST00000603633 GLI2P10070 1586 aa24.77■■□□□ 1.56
LINC00221-201ENST00000603633 TROQ12816 1431 aaPredicted RBP24.71■■□□□ 1.55
LINC00221-201ENST00000603633 CD109Q6YHK3 1445 aa24.69■■□□□ 1.54
LINC00221-201ENST00000603633 APLP2Q06481 763 aa24.68■■□□□ 1.54
LINC00221-201ENST00000603633 MTUS2Q5JR59 1369 aa24.63■■□□□ 1.53
LINC00221-201ENST00000603633 KIF13AQ9H1H9 1805 aa24.61■■□□□ 1.53
LINC00221-201ENST00000603633 TEX14Q8IWB6 1497 aa24.61■■□□□ 1.53
LINC00221-201ENST00000603633 MAGI3Q5TCQ9 1506 aa24.6■■□□□ 1.53
LINC00221-201ENST00000603633 MAP3K1Q13233 1512 aa24.58■■□□□ 1.53
LINC00221-201ENST00000603633 ABCA9Q8IUA7 1624 aa24.56■■□□□ 1.52
LINC00221-201ENST00000603633 MAP3K4Q9Y6R4 1608 aa24.56■■□□□ 1.52
LINC00221-201ENST00000603633 PHLDB1Q86UU1 1377 aa24.56■■□□□ 1.52
LINC00221-201ENST00000603633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.55■■□□□ 1.52
LINC00221-201ENST00000603633 CFAP43Q8NDM7 1665 aa24.54■■□□□ 1.52
LINC00221-201ENST00000603633 KIF14Q15058 1648 aa24.53■■□□□ 1.52
LINC00221-201ENST00000603633 LRRIQ1Q96JM4 1722 aa24.52■■□□□ 1.52
LINC00221-201ENST00000603633 PLCH2O75038 1416 aa24.52■■□□□ 1.52
LINC00221-201ENST00000603633 TIAM1Q13009 1591 aa24.51■■□□□ 1.51
LINC00221-201ENST00000603633 EHBP1L1Q8N3D4 1523 aa24.5■■□□□ 1.51
LINC00221-201ENST00000603633 EFCAB2Q5VUJ9 269 aa24.5■■□□□ 1.51
LINC00221-201ENST00000603633 LRRC9Q6ZRR7 1453 aa24.48■■□□□ 1.51
LINC00221-201ENST00000603633 NEO1Q92859 1461 aa24.47■■□□□ 1.51
LINC00221-201ENST00000603633 KANK4Q5T7N3 995 aaPredicted RBP24.46■■□□□ 1.51
LINC00221-201ENST00000603633 CCNB3Q8WWL7 1395 aa24.45■■□□□ 1.5
LINC00221-201ENST00000603633 TTC37Q6PGP7 1564 aa24.44■■□□□ 1.5
LINC00221-201ENST00000603633 ARAP3Q8WWN8 1544 aa24.43■■□□□ 1.5
LINC00221-201ENST00000603633 FANCAO15360 1455 aa24.43■■□□□ 1.5
LINC00221-201ENST00000603633 PPRC1Q5VV67 1664 aaKnown RBP24.41■■□□□ 1.5
LINC00221-201ENST00000603633 CFDP1Q9UEE9 299 aaPredicted RBP24.4■■□□□ 1.5
LINC00221-201ENST00000603633 AKNAQ7Z591 1439 aa24.4■■□□□ 1.5
LINC00221-201ENST00000603633 TSPOAP1O95153 1857 aa24.4■■□□□ 1.5
LINC00221-201ENST00000603633 GPATCH8Q9UKJ3 1502 aaKnown RBP24.39■■□□□ 1.49
LINC00221-201ENST00000603633 NCOA2Q15596 1464 aa24.38■■□□□ 1.49
LINC00221-201ENST00000603633 ARHGAP5Q13017 1502 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms