RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 NISCHQ9Y2I1 1504 aa37.38■■■■□ 3.57
LINC00221-201ENST00000603633 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
LINC00221-201ENST00000603633 ABCC9O60706 1549 aa32.14■■■□□ 2.74
LINC00221-201ENST00000603633 DCAF8L2P0C7V8 631 aa31.25■■■□□ 2.59
LINC00221-201ENST00000603633 ZCCHC6Q5VYS8 1495 aaKnown RBP31.18■■■□□ 2.58
LINC00221-201ENST00000603633 NACADO15069 1562 aa31.09■■■□□ 2.57
LINC00221-201ENST00000603633 MYO15BQ96JP2 1530 aa31.04■■■□□ 2.56
LINC00221-201ENST00000603633 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
LINC00221-201ENST00000603633 DCAF1Q9Y4B6 1507 aa30.97■■■□□ 2.55
LINC00221-201ENST00000603633 PABPN1Q86U42 306 aaKnown RBP eCLIP30.16■■■□□ 2.42
LINC00221-201ENST00000603633 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
LINC00221-201ENST00000603633 UNC13AQ9UPW8 1703 aa30.01■■■□□ 2.39
LINC00221-201ENST00000603633 BICRAQ9NZM4 1560 aa29.99■■■□□ 2.39
LINC00221-201ENST00000603633 SHROOM4Q9ULL8 1493 aa29.89■■■□□ 2.37
LINC00221-201ENST00000603633 DNAJC5BQ9UF47 199 aa29.3■■■□□ 2.28
LINC00221-201ENST00000603633 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
LINC00221-201ENST00000603633 CECR2Q9BXF3 1484 aa29.06■■■□□ 2.24
LINC00221-201ENST00000603633 CC2D2AQ9P2K1 1620 aa29.01■■■□□ 2.24
LINC00221-201ENST00000603633 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
LINC00221-201ENST00000603633 SMARCA4P51532 1647 aa28.86■■■□□ 2.21
LINC00221-201ENST00000603633 MROH2BQ7Z745 1585 aa28.76■■■□□ 2.2
LINC00221-201ENST00000603633 ATAD2BQ9ULI0 1458 aa28.76■■■□□ 2.19
LINC00221-201ENST00000603633 NCAPD3P42695 1498 aa28.74■■■□□ 2.19
LINC00221-201ENST00000603633 SMARCA2P51531 1590 aa28.73■■■□□ 2.19
LINC00221-201ENST00000603633 PEG3Q9GZU2 1588 aa28.63■■■□□ 2.17
LINC00221-201ENST00000603633 RSF1Q96T23 1441 aaPredicted RBP28.62■■■□□ 2.17
LINC00221-201ENST00000603633 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
LINC00221-201ENST00000603633 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
LINC00221-201ENST00000603633 WIZO95785 1651 aa28.37■■■□□ 2.13
LINC00221-201ENST00000603633 TOP2AP11388 1531 aaKnown RBP28.19■■■□□ 2.1
LINC00221-201ENST00000603633 SUPT5HO00267 1087 aaKnown RBP28.13■■■□□ 2.09
LINC00221-201ENST00000603633 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.07
LINC00221-201ENST00000603633 CCDC88BA6NC98 1476 aa27.9■■■□□ 2.06
LINC00221-201ENST00000603633 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
LINC00221-201ENST00000603633 NESP48681 1621 aa27.84■■■□□ 2.05
LINC00221-201ENST00000603633 PDS5BQ9NTI5 1447 aa27.79■■■□□ 2.04
LINC00221-201ENST00000603633 CFTRP13569 1480 aa27.79■■■□□ 2.04
LINC00221-201ENST00000603633 ERCC6Q03468 1493 aa27.75■■■□□ 2.03
LINC00221-201ENST00000603633 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
LINC00221-201ENST00000603633 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
LINC00221-201ENST00000603633 MRC2Q9UBG0 1479 aa27.4■■□□□ 1.98
LINC00221-201ENST00000603633 KIF21AQ7Z4S6 1674 aa27.37■■□□□ 1.97
LINC00221-201ENST00000603633 CUX2O14529 1486 aa27.37■■□□□ 1.97
LINC00221-201ENST00000603633 THOC2Q8NI27 1593 aaKnown RBP27.3■■□□□ 1.96
LINC00221-201ENST00000603633 PRDM2Q13029 1718 aa27.28■■□□□ 1.96
LINC00221-201ENST00000603633 WDR62O43379 1518 aa27.26■■□□□ 1.95
LINC00221-201ENST00000603633 ABCC8Q09428 1581 aa27.23■■□□□ 1.95
LINC00221-201ENST00000603633 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
LINC00221-201ENST00000603633 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
LINC00221-201ENST00000603633 DNMBPQ6XZF7 1577 aa27.08■■□□□ 1.93
LINC00221-201ENST00000603633 WRNQ14191 1432 aaPredicted RBP eCLIP26.99■■□□□ 1.91
LINC00221-201ENST00000603633 CUX1P39880 1505 aa26.97■■□□□ 1.91
LINC00221-201ENST00000603633 IFT140Q96RY7 1462 aa26.94■■□□□ 1.9
LINC00221-201ENST00000603633 POLA1P09884 1462 aaPredicted RBP26.91■■□□□ 1.9
LINC00221-201ENST00000603633 SOGA1O94964 1423 aa26.88■■□□□ 1.89
LINC00221-201ENST00000603633 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
LINC00221-201ENST00000603633 TOP2BQ02880 1626 aa26.79■■□□□ 1.88
LINC00221-201ENST00000603633 RAD54L2Q9Y4B4 1467 aa26.78■■□□□ 1.88
LINC00221-201ENST00000603633 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
LINC00221-201ENST00000603633 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
LINC00221-201ENST00000603633 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
LINC00221-201ENST00000603633 TARBP1Q13395 1621 aaKnown RBP26.71■■□□□ 1.87
LINC00221-201ENST00000603633 TDRD9Q8NDG6 1382 aaKnown RBP26.67■■□□□ 1.86
LINC00221-201ENST00000603633 ABCA10Q8WWZ4 1543 aa26.66■■□□□ 1.86
LINC00221-201ENST00000603633 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.86
LINC00221-201ENST00000603633 TRIM41Q8WV44 630 aa26.62■■□□□ 1.85
LINC00221-201ENST00000603633 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
LINC00221-201ENST00000603633 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
LINC00221-201ENST00000603633 GAPVD1Q14C86 1478 aa26.54■■□□□ 1.84
LINC00221-201ENST00000603633 GRIN2BQ13224 1484 aa26.52■■□□□ 1.84
LINC00221-201ENST00000603633 KIF27Q86VH2 1401 aa26.45■■□□□ 1.83
LINC00221-201ENST00000603633 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
LINC00221-201ENST00000603633 MAGI1Q96QZ7 1491 aaPredicted RBP26.4■■□□□ 1.82
LINC00221-201ENST00000603633 ABCA5Q8WWZ7 1642 aa26.4■■□□□ 1.82
LINC00221-201ENST00000603633 SNAPC4Q5SXM2 1469 aa26.39■■□□□ 1.82
LINC00221-201ENST00000603633 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
LINC00221-201ENST00000603633 CHMP7Q8WUX9 453 aaPredicted RBP26.38■■□□□ 1.81
LINC00221-201ENST00000603633 FBLN2P98095 1184 aa26.37■■□□□ 1.81
LINC00221-201ENST00000603633 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
LINC00221-201ENST00000603633 IGF1RP08069 1367 aa26.31■■□□□ 1.8
LINC00221-201ENST00000603633 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
LINC00221-201ENST00000603633 DNAJC5Q9H3Z4 198 aa26.29■■□□□ 1.8
LINC00221-201ENST00000603633 FHAD1B1AJZ9 1412 aa26.28■■□□□ 1.8
LINC00221-201ENST00000603633 PBRM1Q86U86 1689 aa26.22■■□□□ 1.79
LINC00221-201ENST00000603633 CARMIL1Q5VZK9 1371 aa26.17■■□□□ 1.78
LINC00221-201ENST00000603633 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
LINC00221-201ENST00000603633 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.77
LINC00221-201ENST00000603633 GRIN2AQ12879 1464 aa26.14■■□□□ 1.77
LINC00221-201ENST00000603633 EEA1Q15075 1411 aa26.13■■□□□ 1.77
LINC00221-201ENST00000603633 CSRNP3Q8WYN3 585 aa26.08■■□□□ 1.77
LINC00221-201ENST00000603633 CUL7Q14999 1698 aa26.06■■□□□ 1.76
LINC00221-201ENST00000603633 CHD1O14646 1710 aa26.04■■□□□ 1.76
LINC00221-201ENST00000603633 NUP160Q12769 1436 aa26.04■■□□□ 1.76
LINC00221-201ENST00000603633 RAPGEF2Q9Y4G8 1499 aa26■■□□□ 1.75
LINC00221-201ENST00000603633 FAM9AQ8IZU1 332 aaPredicted RBP25.97■■□□□ 1.75
LINC00221-201ENST00000603633 PRXQ9BXM0 1461 aa25.96■■□□□ 1.75
LINC00221-201ENST00000603633 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
LINC00221-201ENST00000603633 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
LINC00221-201ENST00000603633 KIAA0586Q9BVV6 1533 aa25.88■■□□□ 1.73
LINC00221-201ENST00000603633 JPH4Q96JJ6 628 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 296.9 ms