RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 RUSC2Q8N2Y8 1516 aa37.18■■■■□ 3.54
PPFIA3-208ENST00000602726 PRG4Q92954 1404 aaPredicted RBP37.13■■■■□ 3.53
PPFIA3-208ENST00000602726 KIAA0586Q9BVV6 1533 aa37.11■■■■□ 3.53
PPFIA3-208ENST00000602726 RAPGEF2Q9Y4G8 1499 aa36.99■■■■□ 3.51
PPFIA3-208ENST00000602726 TRHP20396 242 aaPredicted RBP36.95■■■■□ 3.51
PPFIA3-208ENST00000602726 IQGAP2Q13576 1575 aa36.84■■■■□ 3.49
PPFIA3-208ENST00000602726 PRXQ9BXM0 1461 aa36.76■■■■□ 3.48
PPFIA3-208ENST00000602726 CARMIL2Q6F5E8 1435 aa36.76■■■■□ 3.47
PPFIA3-208ENST00000602726 CSRNP3Q8WYN3 585 aa36.72■■■■□ 3.47
PPFIA3-208ENST00000602726 PTPRGP23470 1445 aa36.67■■■■□ 3.46
PPFIA3-208ENST00000602726 EEA1Q15075 1411 aa36.67■■■■□ 3.46
PPFIA3-208ENST00000602726 CHIC1Q5VXU3 224 aa36.65■■■■□ 3.46
PPFIA3-208ENST00000602726 TNIKQ9UKE5 1360 aa36.65■■■■□ 3.46
PPFIA3-208ENST00000602726 TTBK1Q5TCY1 1321 aaPredicted RBP36.64■■■■□ 3.46
PPFIA3-208ENST00000602726 UGGT2Q9NYU1 1516 aa36.63■■■■□ 3.45
PPFIA3-208ENST00000602726 NPM1P06748 294 aaKnown RBP eCLIP36.62■■■■□ 3.45
PPFIA3-208ENST00000602726 CTTNBP2Q8WZ74 1663 aa36.61■■■■□ 3.45
PPFIA3-208ENST00000602726 DISP1Q96F81 1524 aa36.6■■■■□ 3.45
PPFIA3-208ENST00000602726 ADCY10Q96PN6 1610 aa36.57■■■■□ 3.44
PPFIA3-208ENST00000602726 FAM9AQ8IZU1 332 aaPredicted RBP36.56■■■■□ 3.44
PPFIA3-208ENST00000602726 KIAA0556O60303 1618 aa36.48■■■■□ 3.43
PPFIA3-208ENST00000602726 GOLGA3Q08378 1498 aa36.44■■■■□ 3.42
PPFIA3-208ENST00000602726 MAPKBP1O60336 1514 aa36.4■■■■□ 3.42
PPFIA3-208ENST00000602726 UACAQ9BZF9 1416 aa36.39■■■■□ 3.42
PPFIA3-208ENST00000602726 UHRF1BP1LA0JNW5 1464 aa36.35■■■■□ 3.41
PPFIA3-208ENST00000602726 ABCC2Q92887 1545 aa36.34■■■■□ 3.41
PPFIA3-208ENST00000602726 ABCC10Q5T3U5 1492 aa36.3■■■■□ 3.4
PPFIA3-208ENST00000602726 KIF13AQ9H1H9 1805 aa36.29■■■■□ 3.4
PPFIA3-208ENST00000602726 FAM69CQ0P6D2 419 aa36.29■■■■□ 3.4
PPFIA3-208ENST00000602726 KIF21BO75037 1637 aa36.27■■■■□ 3.4
PPFIA3-208ENST00000602726 P3H3Q8IVL6 736 aa36.22■■■■□ 3.39
PPFIA3-208ENST00000602726 DIP2BQ9P265 1576 aa36.2■■■■□ 3.39
PPFIA3-208ENST00000602726 PLB1Q6P1J6 1458 aa36.18■■■■□ 3.38
PPFIA3-208ENST00000602726 KDM5BQ9UGL1 1544 aa36.17■■■■□ 3.38
PPFIA3-208ENST00000602726 RANGAP1P46060 587 aaPredicted RBP36.16■■■■□ 3.38
PPFIA3-208ENST00000602726 ASXL2Q76L83 1435 aa36.16■■■■□ 3.38
PPFIA3-208ENST00000602726 EHMT2Q96KQ7 1210 aa36.13■■■■□ 3.37
PPFIA3-208ENST00000602726 SAMD9Q5K651 1589 aa36.13■■■■□ 3.37
PPFIA3-208ENST00000602726 ABCA8O94911 1581 aa36.1■■■■□ 3.37
PPFIA3-208ENST00000602726 ZCCHC11Q5TAX3 1644 aaKnown RBP36.09■■■■□ 3.37
PPFIA3-208ENST00000602726 UBTFP17480 764 aaKnown RBP36.09■■■■□ 3.37
PPFIA3-208ENST00000602726 GLI2P10070 1586 aa35.95■■■■□ 3.35
PPFIA3-208ENST00000602726 FHOD3Q2V2M9 1422 aa35.95■■■■□ 3.35
PPFIA3-208ENST00000602726 TSPOAP1O95153 1857 aa35.94■■■■□ 3.34
PPFIA3-208ENST00000602726 EFCAB5A4FU69 1503 aa35.93■■■■□ 3.34
PPFIA3-208ENST00000602726 EPRSP07814 1512 aaKnown RBP35.93■■■■□ 3.34
PPFIA3-208ENST00000602726 WDR7Q9Y4E6 1490 aa35.92■■■■□ 3.34
PPFIA3-208ENST00000602726 ARID3CA6NKF2 412 aa35.9■■■■□ 3.34
PPFIA3-208ENST00000602726 RAPGEF6Q8TEU7 1601 aa35.87■■■■□ 3.33
PPFIA3-208ENST00000602726 ATP10BO94823 1461 aa35.84■■■■□ 3.33
PPFIA3-208ENST00000602726 KCNH8Q96L42 1107 aa35.81■■■■□ 3.32
PPFIA3-208ENST00000602726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.76■■■■□ 3.32
PPFIA3-208ENST00000602726 HNRNPUL2Q1KMD3 747 aaKnown RBP35.76■■■■□ 3.32
PPFIA3-208ENST00000602726 MAP3K4Q9Y6R4 1608 aa35.75■■■■□ 3.31
PPFIA3-208ENST00000602726 NUP153P49790 1475 aaKnown RBP35.73■■■■□ 3.31
PPFIA3-208ENST00000602726 KDM6BO15054 1643 aa35.73■■■■□ 3.31
PPFIA3-208ENST00000602726 PPRC1Q5VV67 1664 aaKnown RBP35.73■■■■□ 3.31
PPFIA3-208ENST00000602726 ARHGAP35Q9NRY4 1499 aa35.71■■■■□ 3.31
PPFIA3-208ENST00000602726 TEX14Q8IWB6 1497 aa35.67■■■■□ 3.3
PPFIA3-208ENST00000602726 CD109Q6YHK3 1445 aa35.65■■■■□ 3.3
PPFIA3-208ENST00000602726 FMN1Q68DA7 1419 aa35.64■■■■□ 3.3
PPFIA3-208ENST00000602726 CFAP43Q8NDM7 1665 aa35.62■■■■□ 3.29
PPFIA3-208ENST00000602726 PLEKHD1A6NEE1 506 aa35.56■■■■□ 3.28
PPFIA3-208ENST00000602726 ATP1B4Q9UN42 357 aaPredicted RBP35.56■■■■□ 3.28
PPFIA3-208ENST00000602726 MAGI3Q5TCQ9 1506 aa35.56■■■■□ 3.28
PPFIA3-208ENST00000602726 ABCA9Q8IUA7 1624 aa35.48■■■■□ 3.27
PPFIA3-208ENST00000602726 HECW1Q76N89 1606 aa35.47■■■■□ 3.27
PPFIA3-208ENST00000602726 COL17A1Q9UMD9 1497 aaPredicted RBP35.47■■■■□ 3.27
PPFIA3-208ENST00000602726 CDK13Q14004 1512 aaKnown RBP35.47■■■■□ 3.27
PPFIA3-208ENST00000602726 CLIP1P30622 1438 aa35.43■■■■□ 3.26
PPFIA3-208ENST00000602726 CDK11AQ9UQ88 783 aaPredicted RBP35.36■■■■□ 3.25
PPFIA3-208ENST00000602726 AEBP2Q6ZN18 517 aaPredicted RBP35.33■■■■□ 3.25
PPFIA3-208ENST00000602726 CASKIN1Q8WXD9 1431 aa35.32■■■■□ 3.24
PPFIA3-208ENST00000602726 PHLDB1Q86UU1 1377 aa35.3■■■■□ 3.24
PPFIA3-208ENST00000602726 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.28■■■■□ 3.24
PPFIA3-208ENST00000602726 PCF11O94913 1555 aaKnown RBP35.28■■■■□ 3.24
PPFIA3-208ENST00000602726 ARAP3Q8WWN8 1544 aa35.26■■■■□ 3.23
PPFIA3-208ENST00000602726 NEO1Q92859 1461 aa35.25■■■■□ 3.23
PPFIA3-208ENST00000602726 LRRIQ1Q96JM4 1722 aa35.23■■■■□ 3.23
PPFIA3-208ENST00000602726 TTC37Q6PGP7 1564 aa35.22■■■■□ 3.23
PPFIA3-208ENST00000602726 CCDC18Q5T9S5 1454 aa35.21■■■■□ 3.23
PPFIA3-208ENST00000602726 FYCO1Q9BQS8 1478 aa35.21■■■■□ 3.23
PPFIA3-208ENST00000602726 TROQ12816 1431 aaPredicted RBP35.19■■■■□ 3.22
PPFIA3-208ENST00000602726 CEP162Q5TB80 1403 aa35.19■■■■□ 3.22
PPFIA3-208ENST00000602726 LOC105371045A0A1W2PR82 267 aa35.18■■■■□ 3.22
PPFIA3-208ENST00000602726 FANCAO15360 1455 aa35.14■■■■□ 3.22
PPFIA3-208ENST00000602726 RAPGEF3O95398 923 aa35.12■■■■□ 3.21
PPFIA3-208ENST00000602726 KIF14Q15058 1648 aa35.12■■■■□ 3.21
PPFIA3-208ENST00000602726 CFAP74Q9C0B2 1584 aa35.11■■■■□ 3.21
PPFIA3-208ENST00000602726 AKNAQ7Z591 1439 aa35.1■■■■□ 3.21
PPFIA3-208ENST00000602726 PLCH2O75038 1416 aa35.09■■■■□ 3.21
PPFIA3-208ENST00000602726 KDM4FA0A1W2PPD8 638 aa35.07■■■■□ 3.2
PPFIA3-208ENST00000602726 MYO5CQ9NQX4 1742 aa35.03■■■■□ 3.2
PPFIA3-208ENST00000602726 DENND4BO75064 1496 aaPredicted RBP35.03■■■■□ 3.2
PPFIA3-208ENST00000602726 EFCAB2Q5VUJ9 269 aa35.01■■■■□ 3.2
PPFIA3-208ENST00000602726 FRMPD1Q5SYB0 1578 aa34.97■■■■□ 3.19
PPFIA3-208ENST00000602726 ADGRL1O94910 1474 aa34.97■■■■□ 3.19
PPFIA3-208ENST00000602726 ARHGAP5Q13017 1502 aa34.92■■■■□ 3.18
PPFIA3-208ENST00000602726 RICTORQ6R327 1708 aa34.92■■■■□ 3.18
PPFIA3-208ENST00000602726 SCAPERQ9BY12 1400 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms