RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 IGF1RP08069 1367 aa35.44■■■■□ 3.26
PPFIA3-204ENST00000602492 CUL7Q14999 1698 aa35.37■■■■□ 3.25
PPFIA3-204ENST00000602492 KIAA0586Q9BVV6 1533 aa35.37■■■■□ 3.25
PPFIA3-204ENST00000602492 AEBP2Q6ZN18 517 aaPredicted RBP35.36■■■■□ 3.25
PPFIA3-204ENST00000602492 KIF13AQ9H1H9 1805 aa35.32■■■■□ 3.25
PPFIA3-204ENST00000602492 NPM1P06748 294 aaKnown RBP eCLIP35.31■■■■□ 3.24
PPFIA3-204ENST00000602492 CARMIL1Q5VZK9 1371 aa35.22■■■■□ 3.23
PPFIA3-204ENST00000602492 MAPKBP1O60336 1514 aa35.22■■■■□ 3.23
PPFIA3-204ENST00000602492 ADCY10Q96PN6 1610 aa35.21■■■■□ 3.23
PPFIA3-204ENST00000602492 ABCC10Q5T3U5 1492 aa35.21■■■■□ 3.23
PPFIA3-204ENST00000602492 FAM69CQ0P6D2 419 aa35.2■■■■□ 3.23
PPFIA3-204ENST00000602492 DIP2BQ9P265 1576 aa35.1■■■■□ 3.21
PPFIA3-204ENST00000602492 PTPRGP23470 1445 aa35.08■■■■□ 3.21
PPFIA3-204ENST00000602492 CARMIL2Q6F5E8 1435 aa35.06■■■■□ 3.2
PPFIA3-204ENST00000602492 TNIKQ9UKE5 1360 aa35■■■■□ 3.19
PPFIA3-204ENST00000602492 IQGAP2Q13576 1575 aa35■■■■□ 3.19
PPFIA3-204ENST00000602492 TTBK1Q5TCY1 1321 aaPredicted RBP35■■■■□ 3.19
PPFIA3-204ENST00000602492 ABCC2Q92887 1545 aa34.91■■■■□ 3.18
PPFIA3-204ENST00000602492 RAPGEF2Q9Y4G8 1499 aa34.88■■■■□ 3.17
PPFIA3-204ENST00000602492 TSPOAP1O95153 1857 aa34.84■■■■□ 3.17
PPFIA3-204ENST00000602492 DISP1Q96F81 1524 aa34.84■■■■□ 3.17
PPFIA3-204ENST00000602492 KDM6BO15054 1643 aa34.84■■■■□ 3.17
PPFIA3-204ENST00000602492 UHRF1BP1LA0JNW5 1464 aa34.82■■■■□ 3.16
PPFIA3-204ENST00000602492 UACAQ9BZF9 1416 aa34.8■■■■□ 3.16
PPFIA3-204ENST00000602492 PLB1Q6P1J6 1458 aa34.79■■■■□ 3.16
PPFIA3-204ENST00000602492 ASXL2Q76L83 1435 aa34.79■■■■□ 3.16
PPFIA3-204ENST00000602492 UGGT2Q9NYU1 1516 aa34.78■■■■□ 3.16
PPFIA3-204ENST00000602492 GLI2P10070 1586 aa34.7■■■■□ 3.14
PPFIA3-204ENST00000602492 KIAA0556O60303 1618 aa34.68■■■■□ 3.14
PPFIA3-204ENST00000602492 KDM5BQ9UGL1 1544 aa34.65■■■■□ 3.14
PPFIA3-204ENST00000602492 PPRC1Q5VV67 1664 aaKnown RBP34.58■■■■□ 3.13
PPFIA3-204ENST00000602492 EPRSP07814 1512 aaKnown RBP34.57■■■■□ 3.12
PPFIA3-204ENST00000602492 ZCCHC11Q5TAX3 1644 aaKnown RBP34.56■■■■□ 3.12
PPFIA3-204ENST00000602492 CTTNBP2Q8WZ74 1663 aa34.56■■■■□ 3.12
PPFIA3-204ENST00000602492 KDM4FA0A1W2PPD8 638 aa34.53■■■■□ 3.12
PPFIA3-204ENST00000602492 GOLGA3Q08378 1498 aa34.52■■■■□ 3.12
PPFIA3-204ENST00000602492 MAP3K4Q9Y6R4 1608 aa34.48■■■■□ 3.11
PPFIA3-204ENST00000602492 PRXQ9BXM0 1461 aa34.47■■■■□ 3.11
PPFIA3-204ENST00000602492 TEX14Q8IWB6 1497 aa34.45■■■■□ 3.1
PPFIA3-204ENST00000602492 WDR7Q9Y4E6 1490 aa34.44■■■■□ 3.1
PPFIA3-204ENST00000602492 COL17A1Q9UMD9 1497 aaPredicted RBP34.39■■■■□ 3.1
PPFIA3-204ENST00000602492 ABCA8O94911 1581 aa34.37■■■■□ 3.09
PPFIA3-204ENST00000602492 KCNH8Q96L42 1107 aa34.26■■■■□ 3.08
PPFIA3-204ENST00000602492 CD109Q6YHK3 1445 aa34.25■■■■□ 3.07
PPFIA3-204ENST00000602492 FAM9AQ8IZU1 332 aaPredicted RBP34.25■■■■□ 3.07
PPFIA3-204ENST00000602492 ADGRL1O94910 1474 aa34.25■■■■□ 3.07
PPFIA3-204ENST00000602492 CFAP43Q8NDM7 1665 aa34.22■■■■□ 3.07
PPFIA3-204ENST00000602492 MAGI3Q5TCQ9 1506 aa34.21■■■■□ 3.07
PPFIA3-204ENST00000602492 CSRNP3Q8WYN3 585 aa34.2■■■■□ 3.07
PPFIA3-204ENST00000602492 P3H3Q8IVL6 736 aa34.18■■■■□ 3.06
PPFIA3-204ENST00000602492 ARID3CA6NKF2 412 aa34.12■■■■□ 3.05
PPFIA3-204ENST00000602492 ATP10BO94823 1461 aa34.09■■■■□ 3.05
PPFIA3-204ENST00000602492 SAMD9Q5K651 1589 aa34.07■■■■□ 3.05
PPFIA3-204ENST00000602492 EEA1Q15075 1411 aa34.04■■■■□ 3.04
PPFIA3-204ENST00000602492 RAPGEF6Q8TEU7 1601 aa33.98■■■■□ 3.03
PPFIA3-204ENST00000602492 ARAP3Q8WWN8 1544 aa33.95■■■■□ 3.03
PPFIA3-204ENST00000602492 ABCA9Q8IUA7 1624 aa33.93■■■■□ 3.02
PPFIA3-204ENST00000602492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.92■■■■□ 3.02
PPFIA3-204ENST00000602492 HNRNPUL2Q1KMD3 747 aaKnown RBP33.92■■■■□ 3.02
PPFIA3-204ENST00000602492 RANGAP1P46060 587 aaPredicted RBP33.91■■■■□ 3.02
PPFIA3-204ENST00000602492 PHLDB1Q86UU1 1377 aa33.89■■■■□ 3.02
PPFIA3-204ENST00000602492 NUP153P49790 1475 aaKnown RBP33.87■■■■□ 3.01
PPFIA3-204ENST00000602492 FHOD3Q2V2M9 1422 aa33.87■■■■□ 3.01
PPFIA3-204ENST00000602492 KIF21BO75037 1637 aa33.83■■■■□ 3.01
PPFIA3-204ENST00000602492 NEO1Q92859 1461 aa33.81■■■■□ 3
PPFIA3-204ENST00000602492 HECW2Q9P2P5 1572 aa33.81■■■■□ 3
PPFIA3-204ENST00000602492 RAPGEF3O95398 923 aa33.75■■■□□ 2.99
PPFIA3-204ENST00000602492 EFCAB5A4FU69 1503 aa33.74■■■□□ 2.99
PPFIA3-204ENST00000602492 PLEKHD1A6NEE1 506 aa33.72■■■□□ 2.99
PPFIA3-204ENST00000602492 FRMPD1Q5SYB0 1578 aa33.63■■■□□ 2.97
PPFIA3-204ENST00000602492 ILDR1Q86SU0 546 aaPredicted RBP33.62■■■□□ 2.97
PPFIA3-204ENST00000602492 ADAMTSL3P82987 1691 aa33.57■■■□□ 2.96
PPFIA3-204ENST00000602492 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.57■■■□□ 2.96
PPFIA3-204ENST00000602492 DENND4BO75064 1496 aaPredicted RBP33.56■■■□□ 2.96
PPFIA3-204ENST00000602492 FANCAO15360 1455 aa33.56■■■□□ 2.96
PPFIA3-204ENST00000602492 AKNAQ7Z591 1439 aa33.55■■■□□ 2.96
PPFIA3-204ENST00000602492 CFAP74Q9C0B2 1584 aa33.55■■■□□ 2.96
PPFIA3-204ENST00000602492 ARID4BQ4LE39 1312 aaPredicted RBP33.54■■■□□ 2.96
PPFIA3-204ENST00000602492 UBTFP17480 764 aaKnown RBP33.54■■■□□ 2.96
PPFIA3-204ENST00000602492 PTPRMP28827 1452 aa33.54■■■□□ 2.96
PPFIA3-204ENST00000602492 EHMT2Q96KQ7 1210 aa33.52■■■□□ 2.96
PPFIA3-204ENST00000602492 CDK13Q14004 1512 aaKnown RBP33.52■■■□□ 2.96
PPFIA3-204ENST00000602492 TTC37Q6PGP7 1564 aa33.51■■■□□ 2.96
PPFIA3-204ENST00000602492 ARHGEF40Q8TER5 1519 aa33.5■■■□□ 2.95
PPFIA3-204ENST00000602492 BCORL1Q5H9F3 1711 aa33.49■■■□□ 2.95
PPFIA3-204ENST00000602492 RICTORQ6R327 1708 aa33.49■■■□□ 2.95
PPFIA3-204ENST00000602492 FMN1Q68DA7 1419 aa33.46■■■□□ 2.95
PPFIA3-204ENST00000602492 CHIC1Q5VXU3 224 aa33.43■■■□□ 2.94
PPFIA3-204ENST00000602492 ATP1B4Q9UN42 357 aaPredicted RBP33.43■■■□□ 2.94
PPFIA3-204ENST00000602492 MADDQ8WXG6 1647 aa33.42■■■□□ 2.94
PPFIA3-204ENST00000602492 ARHGAP35Q9NRY4 1499 aa33.41■■■□□ 2.94
PPFIA3-204ENST00000602492 HECW1Q76N89 1606 aa33.41■■■□□ 2.94
PPFIA3-204ENST00000602492 ZMYM4Q5VZL5 1548 aa33.4■■■□□ 2.94
PPFIA3-204ENST00000602492 PLCH2O75038 1416 aa33.37■■■□□ 2.93
PPFIA3-204ENST00000602492 ZFYVE16Q7Z3T8 1539 aa33.35■■■□□ 2.93
PPFIA3-204ENST00000602492 CDK11AQ9UQ88 783 aaPredicted RBP33.35■■■□□ 2.93
PPFIA3-204ENST00000602492 MAGI2Q86UL8 1455 aa33.34■■■□□ 2.93
PPFIA3-204ENST00000602492 POGZQ7Z3K3 1410 aa33.33■■■□□ 2.93
PPFIA3-204ENST00000602492 SCAPERQ9BY12 1400 aa33.32■■■□□ 2.92
PPFIA3-204ENST00000602492 YEATS2Q9ULM3 1422 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms