RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 KIF27Q86VH2 1401 aa14.13□□□□□ -0.15
HCG18-242ENST00000602319 LRRC9Q6ZRR7 1453 aa14.11□□□□□ -0.15
HCG18-242ENST00000602319 RBM19Q9Y4C8 960 aaKnown RBP14.11□□□□□ -0.15
HCG18-242ENST00000602319 FKBP8Q14318 412 aa14.08□□□□□ -0.15
HCG18-242ENST00000602319 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.08□□□□□ -0.15
HCG18-242ENST00000602319 FANCIQ9NVI1 1328 aa14.05□□□□□ -0.16
HCG18-242ENST00000602319 PCF11O94913 1555 aaKnown RBP14.04□□□□□ -0.16
HCG18-242ENST00000602319 KDM5BQ9UGL1 1544 aa14.03□□□□□ -0.16
HCG18-242ENST00000602319 CFTRP13569 1480 aa14.03□□□□□ -0.16
HCG18-242ENST00000602319 PHLDB1Q86UU1 1377 aa14.02□□□□□ -0.16
HCG18-242ENST00000602319 MSH5O43196 834 aa14.02□□□□□ -0.17
HCG18-242ENST00000602319 NCAPD3P42695 1498 aa14.01□□□□□ -0.17
HCG18-242ENST00000602319 BCANQ96GW7 911 aa13.98□□□□□ -0.17
HCG18-242ENST00000602319 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.17
HCG18-242ENST00000602319 DDX10Q13206 875 aaKnown RBP13.97□□□□□ -0.17
HCG18-242ENST00000602319 FYCO1Q9BQS8 1478 aa13.96□□□□□ -0.17
HCG18-242ENST00000602319 FHAD1B1AJZ9 1412 aa13.96□□□□□ -0.17
HCG18-242ENST00000602319 NEFLP07196 543 aa13.96□□□□□ -0.17
HCG18-242ENST00000602319 EFCAB5A4FU69 1503 aa13.96□□□□□ -0.18
HCG18-242ENST00000602319 PTPN23Q9H3S7 1636 aa13.94□□□□□ -0.18
HCG18-242ENST00000602319 RANGAP1P46060 587 aaPredicted RBP13.94□□□□□ -0.18
HCG18-242ENST00000602319 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
HCG18-242ENST00000602319 IGF1RP08069 1367 aa13.94□□□□□ -0.18
HCG18-242ENST00000602319 ERICH6BQ5W0A0 696 aa13.93□□□□□ -0.18
HCG18-242ENST00000602319 NCOA2Q15596 1464 aa13.93□□□□□ -0.18
HCG18-242ENST00000602319 POLR1AO95602 1720 aaPredicted RBP13.93□□□□□ -0.18
HCG18-242ENST00000602319 CTTNBP2Q8WZ74 1663 aa13.92□□□□□ -0.18
HCG18-242ENST00000602319 FGD5Q6ZNL6 1462 aa13.91□□□□□ -0.18
HCG18-242ENST00000602319 SIN3AQ96ST3 1273 aa13.91□□□□□ -0.18
HCG18-242ENST00000602319 ANP32CO43423 234 aa13.9□□□□□ -0.18
HCG18-242ENST00000602319 LRRIQ1Q96JM4 1722 aa13.9□□□□□ -0.18
HCG18-242ENST00000602319 HECW1Q76N89 1606 aa13.89□□□□□ -0.19
HCG18-242ENST00000602319 GCC2Q8IWJ2 1684 aa13.89□□□□□ -0.19
HCG18-242ENST00000602319 CASKIN1Q8WXD9 1431 aa13.89□□□□□ -0.19
HCG18-242ENST00000602319 HFM1A2PYH4 1435 aa13.89□□□□□ -0.19
HCG18-242ENST00000602319 UACAQ9BZF9 1416 aa13.89□□□□□ -0.19
HCG18-242ENST00000602319 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
HCG18-242ENST00000602319 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
HCG18-242ENST00000602319 CCDC18Q5T9S5 1454 aa13.87□□□□□ -0.19
HCG18-242ENST00000602319 CC2D2AQ9P2K1 1620 aa13.87□□□□□ -0.19
HCG18-242ENST00000602319 CUL7Q14999 1698 aa13.85□□□□□ -0.19
HCG18-242ENST00000602319 THOC2Q8NI27 1593 aaKnown RBP13.85□□□□□ -0.19
HCG18-242ENST00000602319 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
HCG18-242ENST00000602319 FGD6Q6ZV73 1430 aa13.84□□□□□ -0.19
HCG18-242ENST00000602319 TRIM52Q96A61 297 aa13.84□□□□□ -0.19
HCG18-242ENST00000602319 ITGAEP38570 1179 aa13.84□□□□□ -0.19
HCG18-242ENST00000602319 KIF21AQ7Z4S6 1674 aa13.83□□□□□ -0.2
HCG18-242ENST00000602319 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.2
HCG18-242ENST00000602319 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
HCG18-242ENST00000602319 ARHGEF11O15085 1522 aa13.81□□□□□ -0.2
HCG18-242ENST00000602319 PTPRKQ15262 1439 aa13.8□□□□□ -0.2
HCG18-242ENST00000602319 NAIPQ13075 1403 aa13.79□□□□□ -0.2
HCG18-242ENST00000602319 DENND4BO75064 1496 aaPredicted RBP13.79□□□□□ -0.2
HCG18-242ENST00000602319 CDK11AQ9UQ88 783 aaPredicted RBP13.79□□□□□ -0.2
HCG18-242ENST00000602319 TONSLQ96HA7 1378 aa13.78□□□□□ -0.2
HCG18-242ENST00000602319 CNTLNQ9NXG0 1405 aa13.78□□□□□ -0.2
HCG18-242ENST00000602319 SUPT6HQ7KZ85 1726 aaKnown RBP13.77□□□□□ -0.2
HCG18-242ENST00000602319 AKNAQ7Z591 1439 aa13.77□□□□□ -0.21
HCG18-242ENST00000602319 PPP4R2Q9NY27 417 aa13.76□□□□□ -0.21
HCG18-242ENST00000602319 TCOF1Q13428 1488 aaKnown RBP13.75□□□□□ -0.21
HCG18-242ENST00000602319 EHBP1L1Q8N3D4 1523 aa13.74□□□□□ -0.21
HCG18-242ENST00000602319 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
HCG18-242ENST00000602319 UGGT2Q9NYU1 1516 aa13.74□□□□□ -0.21
HCG18-242ENST00000602319 FHOD3Q2V2M9 1422 aa13.73□□□□□ -0.21
HCG18-242ENST00000602319 GRIN2BQ13224 1484 aa13.73□□□□□ -0.21
HCG18-242ENST00000602319 FAM50AQ14320 339 aaKnown RBP13.73□□□□□ -0.21
HCG18-242ENST00000602319 NCOA1Q15788 1441 aa13.73□□□□□ -0.21
HCG18-242ENST00000602319 FMN1Q68DA7 1419 aa13.72□□□□□ -0.21
HCG18-242ENST00000602319 DNMBPQ6XZF7 1577 aa13.72□□□□□ -0.21
HCG18-242ENST00000602319 WASHC2AQ641Q2 1341 aa13.72□□□□□ -0.21
HCG18-242ENST00000602319 HIRIP3Q9BW71 556 aaPredicted RBP13.71□□□□□ -0.21
HCG18-242ENST00000602319 MYOM3Q5VTT5 1437 aa13.71□□□□□ -0.21
HCG18-242ENST00000602319 HNRNPUQ00839 825 aaKnown RBP eCLIP13.69□□□□□ -0.22
HCG18-242ENST00000602319 ZBED9Q6R2W3 1325 aa13.69□□□□□ -0.22
HCG18-242ENST00000602319 KDM6BO15054 1643 aa13.67□□□□□ -0.22
HCG18-242ENST00000602319 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
HCG18-242ENST00000602319 RNF123Q5XPI4 1314 aa13.66□□□□□ -0.22
HCG18-242ENST00000602319 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.22
HCG18-242ENST00000602319 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
HCG18-242ENST00000602319 DEKP35659 375 aaKnown RBP13.64□□□□□ -0.23
HCG18-242ENST00000602319 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
HCG18-242ENST00000602319 MAGI3Q5TCQ9 1506 aa13.64□□□□□ -0.23
HCG18-242ENST00000602319 TEX14Q8IWB6 1497 aa13.64□□□□□ -0.23
HCG18-242ENST00000602319 CCDC7Q96M83 1385 aa13.63□□□□□ -0.23
HCG18-242ENST00000602319 HSPA5P11021 654 aaKnown RBP13.62□□□□□ -0.23
HCG18-242ENST00000602319 IRX6P78412 446 aaPredicted RBP13.61□□□□□ -0.23
HCG18-242ENST00000602319 PRKRIP1Q9H875 184 aaPredicted RBP13.6□□□□□ -0.23
HCG18-242ENST00000602319 NOP58Q9Y2X3 529 aaKnown RBP13.6□□□□□ -0.23
HCG18-242ENST00000602319 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
HCG18-242ENST00000602319 CCDC184Q52MB2 194 aa13.59□□□□□ -0.23
HCG18-242ENST00000602319 RPRD2Q5VT52 1461 aaKnown RBP13.59□□□□□ -0.23
HCG18-242ENST00000602319 TOPBP1Q92547 1522 aa13.58□□□□□ -0.24
HCG18-242ENST00000602319 MBD5Q9P267 1494 aa13.58□□□□□ -0.24
HCG18-242ENST00000602319 MTUS2Q5JR59 1369 aa13.57□□□□□ -0.24
HCG18-242ENST00000602319 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
HCG18-242ENST00000602319 EIF4G2P78344 907 aaKnown RBP eCLIP13.56□□□□□ -0.24
HCG18-242ENST00000602319 MIA2Q96PC5 1412 aa13.55□□□□□ -0.24
HCG18-242ENST00000602319 BCORL1Q5H9F3 1711 aa13.54□□□□□ -0.24
HCG18-242ENST00000602319 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
HCG18-242ENST00000602319 DNMT1P26358 1616 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms