RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 LRRC9Q6ZRR7 1453 aa26.47■■□□□ 1.83
ARHGEF1-221ENST00000600387 DDX10Q13206 875 aaKnown RBP26.46■■□□□ 1.83
ARHGEF1-221ENST00000600387 CFTRP13569 1480 aa26.44■■□□□ 1.82
ARHGEF1-221ENST00000600387 BCANQ96GW7 911 aa26.44■■□□□ 1.82
ARHGEF1-221ENST00000600387 PRDM2Q13029 1718 aa26.43■■□□□ 1.82
ARHGEF1-221ENST00000600387 PPP1R15AO75807 674 aaPredicted RBP26.43■■□□□ 1.82
ARHGEF1-221ENST00000600387 CCER2I3L3R5 266 aa26.42■■□□□ 1.82
ARHGEF1-221ENST00000600387 NEFLP07196 543 aa26.41■■□□□ 1.82
ARHGEF1-221ENST00000600387 CFAP43Q8NDM7 1665 aa26.41■■□□□ 1.82
ARHGEF1-221ENST00000600387 PHLDB1Q86UU1 1377 aa26.37■■□□□ 1.81
ARHGEF1-221ENST00000600387 SIN3AQ96ST3 1273 aa26.36■■□□□ 1.81
ARHGEF1-221ENST00000600387 IGF1RP08069 1367 aa26.35■■□□□ 1.81
ARHGEF1-221ENST00000600387 FHAD1B1AJZ9 1412 aa26.35■■□□□ 1.81
ARHGEF1-221ENST00000600387 ANP32CO43423 234 aa26.31■■□□□ 1.8
ARHGEF1-221ENST00000600387 FAM50AQ14320 339 aaKnown RBP26.28■■□□□ 1.8
ARHGEF1-221ENST00000600387 RBM19Q9Y4C8 960 aaKnown RBP26.28■■□□□ 1.8
ARHGEF1-221ENST00000600387 CARMIL1Q5VZK9 1371 aa26.26■■□□□ 1.8
ARHGEF1-221ENST00000600387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.26■■□□□ 1.79
ARHGEF1-221ENST00000600387 PCF11O94913 1555 aaKnown RBP26.26■■□□□ 1.79
ARHGEF1-221ENST00000600387 TRIM52Q96A61 297 aa26.19■■□□□ 1.78
ARHGEF1-221ENST00000600387 BCL11AQ9H165 835 aa26.17■■□□□ 1.78
ARHGEF1-221ENST00000600387 FYCO1Q9BQS8 1478 aa26.16■■□□□ 1.78
ARHGEF1-221ENST00000600387 HIRIP3Q9BW71 556 aaPredicted RBP26.12■■□□□ 1.77
ARHGEF1-221ENST00000600387 TONSLQ96HA7 1378 aa26.11■■□□□ 1.77
ARHGEF1-221ENST00000600387 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
ARHGEF1-221ENST00000600387 EFCAB5A4FU69 1503 aa26.1■■□□□ 1.77
ARHGEF1-221ENST00000600387 AQRO60306 1485 aaKnown RBP eCLIP26.1■■□□□ 1.777e-7■■■□□ 18.6
ARHGEF1-221ENST00000600387 CASKIN1Q8WXD9 1431 aa26.08■■□□□ 1.76
ARHGEF1-221ENST00000600387 CCDC18Q5T9S5 1454 aa26.04■■□□□ 1.76
ARHGEF1-221ENST00000600387 UACAQ9BZF9 1416 aa26.03■■□□□ 1.76
ARHGEF1-221ENST00000600387 FGD6Q6ZV73 1430 aa26.02■■□□□ 1.76
ARHGEF1-221ENST00000600387 FHOD3Q2V2M9 1422 aa26.01■■□□□ 1.75
ARHGEF1-221ENST00000600387 ATP1B4Q9UN42 357 aaPredicted RBP26■■□□□ 1.75
ARHGEF1-221ENST00000600387 HFM1A2PYH4 1435 aa26■■□□□ 1.75
ARHGEF1-221ENST00000600387 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
ARHGEF1-221ENST00000600387 PTPN23Q9H3S7 1636 aa25.99■■□□□ 1.75
ARHGEF1-221ENST00000600387 P3H3Q8IVL6 736 aa25.99■■□□□ 1.75
ARHGEF1-221ENST00000600387 FANCIQ9NVI1 1328 aa25.98■■□□□ 1.75
ARHGEF1-221ENST00000600387 CTTNBP2Q8WZ74 1663 aa25.98■■□□□ 1.75
ARHGEF1-221ENST00000600387 CC2D2AQ9P2K1 1620 aa25.93■■□□□ 1.74
ARHGEF1-221ENST00000600387 ERICH6BQ5W0A0 696 aa25.93■■□□□ 1.74
ARHGEF1-221ENST00000600387 CDK11AQ9UQ88 783 aaPredicted RBP25.93■■□□□ 1.74
ARHGEF1-221ENST00000600387 FMN1Q68DA7 1419 aa25.92■■□□□ 1.74
ARHGEF1-221ENST00000600387 MSH5O43196 834 aa25.92■■□□□ 1.74
ARHGEF1-221ENST00000600387 CUL7Q14999 1698 aa25.91■■□□□ 1.74
ARHGEF1-221ENST00000600387 HNRNPUQ00839 825 aaKnown RBP eCLIP25.91■■□□□ 1.74
ARHGEF1-221ENST00000600387 KDM5BQ9UGL1 1544 aa25.89■■□□□ 1.74
ARHGEF1-221ENST00000600387 PTPRKQ15262 1439 aa25.86■■□□□ 1.73
ARHGEF1-221ENST00000600387 SNAPC4Q5SXM2 1469 aa25.86■■□□□ 1.73
ARHGEF1-221ENST00000600387 NAIPQ13075 1403 aa25.85■■□□□ 1.73
ARHGEF1-221ENST00000600387 ABCA10Q8WWZ4 1543 aa25.85■■□□□ 1.73
ARHGEF1-221ENST00000600387 MTUS2Q5JR59 1369 aa25.84■■□□□ 1.73
ARHGEF1-221ENST00000600387 DNMBPQ6XZF7 1577 aa25.81■■□□□ 1.72
ARHGEF1-221ENST00000600387 SUPT6HQ7KZ85 1726 aaKnown RBP25.8■■□□□ 1.72
ARHGEF1-221ENST00000600387 MYOM3Q5VTT5 1437 aa25.79■■□□□ 1.72
ARHGEF1-221ENST00000600387 LRRIQ1Q96JM4 1722 aa25.79■■□□□ 1.72
ARHGEF1-221ENST00000600387 ERICH6Q7L0X2 663 aa25.79■■□□□ 1.72
ARHGEF1-221ENST00000600387 NCOA2Q15596 1464 aa25.78■■□□□ 1.72
ARHGEF1-221ENST00000600387 THOC2Q8NI27 1593 aaKnown RBP25.77■■□□□ 1.72
ARHGEF1-221ENST00000600387 PPP4R2Q9NY27 417 aa25.76■■□□□ 1.71
ARHGEF1-221ENST00000600387 WASHC2AQ641Q2 1341 aa25.76■■□□□ 1.71
ARHGEF1-221ENST00000600387 FANCD2Q9BXW9 1451 aa25.75■■□□□ 1.71
ARHGEF1-221ENST00000600387 HECW1Q76N89 1606 aa25.75■■□□□ 1.71
ARHGEF1-221ENST00000600387 IRX6P78412 446 aaPredicted RBP25.74■■□□□ 1.71
ARHGEF1-221ENST00000600387 SAMD9Q5K651 1589 aa25.74■■□□□ 1.71
ARHGEF1-221ENST00000600387 GCC2Q8IWJ2 1684 aa25.74■■□□□ 1.71
ARHGEF1-221ENST00000600387 HSPA5P11021 654 aaKnown RBP25.73■■□□□ 1.71
ARHGEF1-221ENST00000600387 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
ARHGEF1-221ENST00000600387 EHBP1L1Q8N3D4 1523 aa25.73■■□□□ 1.71
ARHGEF1-221ENST00000600387 CNTLNQ9NXG0 1405 aa25.72■■□□□ 1.71
ARHGEF1-221ENST00000600387 MYT1LQ9UL68 1186 aa25.71■■□□□ 1.71
ARHGEF1-221ENST00000600387 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.71
ARHGEF1-221ENST00000600387 GRIN2BQ13224 1484 aa25.69■■□□□ 1.7
ARHGEF1-221ENST00000600387 EIF4G2P78344 907 aaKnown RBP eCLIP25.68■■□□□ 1.7
ARHGEF1-221ENST00000600387 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
ARHGEF1-221ENST00000600387 UGGT2Q9NYU1 1516 aa25.66■■□□□ 1.7
ARHGEF1-221ENST00000600387 KIF21AQ7Z4S6 1674 aa25.65■■□□□ 1.7
ARHGEF1-221ENST00000600387 ARHGEF11O15085 1522 aa25.64■■□□□ 1.7
ARHGEF1-221ENST00000600387 AKNAQ7Z591 1439 aa25.63■■□□□ 1.69
ARHGEF1-221ENST00000600387 TCOF1Q13428 1488 aaKnown RBP25.62■■□□□ 1.69
ARHGEF1-221ENST00000600387 DENND4BO75064 1496 aaPredicted RBP25.61■■□□□ 1.69
ARHGEF1-221ENST00000600387 ZBED9Q6R2W3 1325 aa25.61■■□□□ 1.69
ARHGEF1-221ENST00000600387 NCOA1Q15788 1441 aa25.59■■□□□ 1.69
ARHGEF1-221ENST00000600387 POLR1AO95602 1720 aaPredicted RBP25.59■■□□□ 1.69
ARHGEF1-221ENST00000600387 PRKRIP1Q9H875 184 aaPredicted RBP25.58■■□□□ 1.69
ARHGEF1-221ENST00000600387 CCDC7Q96M83 1385 aa25.56■■□□□ 1.68
ARHGEF1-221ENST00000600387 CCDC184Q52MB2 194 aa25.55■■□□□ 1.68
ARHGEF1-221ENST00000600387 RRP7BPQ9NSQ0 103 aa25.53■■□□□ 1.68
ARHGEF1-221ENST00000600387 MRS2Q9HD23 443 aa25.52■■□□□ 1.68
ARHGEF1-221ENST00000600387 ABCA5Q8WWZ7 1642 aa25.51■■□□□ 1.67
ARHGEF1-221ENST00000600387 FAM9BQ8IZU0 186 aa25.51■■□□□ 1.67
ARHGEF1-221ENST00000600387 MAGI3Q5TCQ9 1506 aa25.5■■□□□ 1.67
ARHGEF1-221ENST00000600387 KDM6BO15054 1643 aa25.5■■□□□ 1.67
ARHGEF1-221ENST00000600387 B4GALNT3Q6L9W6 998 aa25.48■■□□□ 1.67
ARHGEF1-221ENST00000600387 MPHOSPH9Q99550 1183 aa25.48■■□□□ 1.67
ARHGEF1-221ENST00000600387 L3MBTL2Q969R5 705 aa25.48■■□□□ 1.67
ARHGEF1-221ENST00000600387 C11orf95C9JLR9 678 aaPredicted RBP25.46■■□□□ 1.67
ARHGEF1-221ENST00000600387 CHIC2Q9UKJ5 165 aa25.46■■□□□ 1.67
ARHGEF1-221ENST00000600387 MIA2Q96PC5 1412 aa25.45■■□□□ 1.66
ARHGEF1-221ENST00000600387 RPRD2Q5VT52 1461 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms