RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 DIP2BQ9P265 1576 aa32.59■■■□□ 2.81
SSBP4-207ENST00000600244 NPM1P06748 294 aaKnown RBP eCLIP32.58■■■□□ 2.81
SSBP4-207ENST00000600244 WRNQ14191 1432 aaPredicted RBP eCLIP32.57■■■□□ 2.8
SSBP4-207ENST00000600244 KDM6BO15054 1643 aa32.56■■■□□ 2.8
SSBP4-207ENST00000600244 ERICH3Q5RHP9 1530 aa32.47■■■□□ 2.79
SSBP4-207ENST00000600244 ADCY10Q96PN6 1610 aa32.42■■■□□ 2.78
SSBP4-207ENST00000600244 TSPOAP1O95153 1857 aa32.35■■■□□ 2.77
SSBP4-207ENST00000600244 RUSC2Q8N2Y8 1516 aa32.31■■■□□ 2.76
SSBP4-207ENST00000600244 TOP2BQ02880 1626 aa32.29■■■□□ 2.76
SSBP4-207ENST00000600244 BIVM-ERCC5R4GMW8 1640 aa32.29■■■□□ 2.76
SSBP4-207ENST00000600244 ADGRL1O94910 1474 aa32.25■■■□□ 2.75
SSBP4-207ENST00000600244 HECW2Q9P2P5 1572 aa32.15■■■□□ 2.74
SSBP4-207ENST00000600244 KIAA0586Q9BVV6 1533 aa32.1■■■□□ 2.73
SSBP4-207ENST00000600244 PPRC1Q5VV67 1664 aaKnown RBP32.08■■■□□ 2.73
SSBP4-207ENST00000600244 COL17A1Q9UMD9 1497 aaPredicted RBP32.04■■■□□ 2.72
SSBP4-207ENST00000600244 GLI2P10070 1586 aa32.04■■■□□ 2.72
SSBP4-207ENST00000600244 PTPRGP23470 1445 aa32.02■■■□□ 2.72
SSBP4-207ENST00000600244 ASXL2Q76L83 1435 aa32■■■□□ 2.71
SSBP4-207ENST00000600244 ABCC2Q92887 1545 aa31.99■■■□□ 2.71
SSBP4-207ENST00000600244 PLB1Q6P1J6 1458 aa31.98■■■□□ 2.71
SSBP4-207ENST00000600244 FBXO41Q8TF61 875 aa31.91■■■□□ 2.7
SSBP4-207ENST00000600244 IGF1RP08069 1367 aa31.88■■■□□ 2.69
SSBP4-207ENST00000600244 TNIKQ9UKE5 1360 aa31.86■■■□□ 2.69
SSBP4-207ENST00000600244 TTBK1Q5TCY1 1321 aaPredicted RBP31.86■■■□□ 2.69
SSBP4-207ENST00000600244 UHRF1BP1LA0JNW5 1464 aa31.83■■■□□ 2.69
SSBP4-207ENST00000600244 EPRSP07814 1512 aaKnown RBP31.8■■■□□ 2.68
SSBP4-207ENST00000600244 MAP3K4Q9Y6R4 1608 aa31.79■■■□□ 2.68
SSBP4-207ENST00000600244 CARMIL2Q6F5E8 1435 aa31.78■■■□□ 2.68
SSBP4-207ENST00000600244 TEX14Q8IWB6 1497 aa31.78■■■□□ 2.68
SSBP4-207ENST00000600244 CUL7Q14999 1698 aa31.77■■■□□ 2.68
SSBP4-207ENST00000600244 SUPT5HO00267 1087 aaKnown RBP31.74■■■□□ 2.67
SSBP4-207ENST00000600244 UACAQ9BZF9 1416 aa31.74■■■□□ 2.67
SSBP4-207ENST00000600244 KDM5BQ9UGL1 1544 aa31.7■■■□□ 2.66
SSBP4-207ENST00000600244 KIF27Q86VH2 1401 aa31.66■■■□□ 2.66
SSBP4-207ENST00000600244 CARMIL1Q5VZK9 1371 aa31.59■■■□□ 2.65
SSBP4-207ENST00000600244 DISP1Q96F81 1524 aa31.58■■■□□ 2.65
SSBP4-207ENST00000600244 IQGAP2Q13576 1575 aa31.56■■■□□ 2.64
SSBP4-207ENST00000600244 ZCCHC11Q5TAX3 1644 aaKnown RBP31.54■■■□□ 2.64
SSBP4-207ENST00000600244 MAGI3Q5TCQ9 1506 aa31.48■■■□□ 2.63
SSBP4-207ENST00000600244 WDR7Q9Y4E6 1490 aa31.47■■■□□ 2.63
SSBP4-207ENST00000600244 CD109Q6YHK3 1445 aa31.43■■■□□ 2.62
SSBP4-207ENST00000600244 KIF21BO75037 1637 aa31.4■■■□□ 2.62
SSBP4-207ENST00000600244 UGGT2Q9NYU1 1516 aa31.38■■■□□ 2.61
SSBP4-207ENST00000600244 PTPRMP28827 1452 aa31.35■■■□□ 2.61
SSBP4-207ENST00000600244 CFAP43Q8NDM7 1665 aa31.35■■■□□ 2.61
SSBP4-207ENST00000600244 LMTK3Q96Q04 1460 aa31.33■■■□□ 2.61
SSBP4-207ENST00000600244 KCNH8Q96L42 1107 aa31.3■■■□□ 2.6
SSBP4-207ENST00000600244 KIAA0556O60303 1618 aa31.3■■■□□ 2.6
SSBP4-207ENST00000600244 ADAMTSL3P82987 1691 aa31.29■■■□□ 2.6
SSBP4-207ENST00000600244 ARAP3Q8WWN8 1544 aa31.27■■■□□ 2.6
SSBP4-207ENST00000600244 PCF11O94913 1555 aaKnown RBP31.21■■■□□ 2.59
SSBP4-207ENST00000600244 RAPGEF2Q9Y4G8 1499 aa31.14■■■□□ 2.58
SSBP4-207ENST00000600244 ABCA8O94911 1581 aa31.13■■■□□ 2.57
SSBP4-207ENST00000600244 PHLDB1Q86UU1 1377 aa31.09■■■□□ 2.57
SSBP4-207ENST00000600244 ILDR2Q71H61 639 aa31.08■■■□□ 2.57
SSBP4-207ENST00000600244 SOCS7O14512 581 aa31.07■■■□□ 2.56
SSBP4-207ENST00000600244 BCORL1Q5H9F3 1711 aa31.07■■■□□ 2.56
SSBP4-207ENST00000600244 RAPGEF3O95398 923 aa31.05■■■□□ 2.56
SSBP4-207ENST00000600244 CERKQ8TCT0 537 aa31.05■■■□□ 2.56
SSBP4-207ENST00000600244 MADDQ8WXG6 1647 aa31.05■■■□□ 2.56
SSBP4-207ENST00000600244 HSPA2P54652 639 aa31■■■□□ 2.55
SSBP4-207ENST00000600244 GOLGA3Q08378 1498 aa30.98■■■□□ 2.55
SSBP4-207ENST00000600244 ARID4BQ4LE39 1312 aaPredicted RBP30.98■■■□□ 2.55
SSBP4-207ENST00000600244 DISP3Q9P2K9 1392 aa30.95■■■□□ 2.55
SSBP4-207ENST00000600244 ABCA9Q8IUA7 1624 aa30.92■■■□□ 2.54
SSBP4-207ENST00000600244 NEO1Q92859 1461 aa30.92■■■□□ 2.54
SSBP4-207ENST00000600244 ATP10BO94823 1461 aa30.9■■■□□ 2.54
SSBP4-207ENST00000600244 FRMPD1Q5SYB0 1578 aa30.89■■■□□ 2.54
SSBP4-207ENST00000600244 RIMS1Q86UR5 1692 aaKnown RBP30.87■■■□□ 2.53
SSBP4-207ENST00000600244 CTTNBP2Q8WZ74 1663 aa30.85■■■□□ 2.53
SSBP4-207ENST00000600244 ARID3CA6NKF2 412 aa30.84■■■□□ 2.53
SSBP4-207ENST00000600244 ARHGEF40Q8TER5 1519 aa30.76■■■□□ 2.51
SSBP4-207ENST00000600244 PLPPR3Q6T4P5 718 aa30.73■■■□□ 2.51
SSBP4-207ENST00000600244 FAM9AQ8IZU1 332 aaPredicted RBP30.7■■■□□ 2.51
SSBP4-207ENST00000600244 POGZQ7Z3K3 1410 aa30.68■■■□□ 2.5
SSBP4-207ENST00000600244 DENND4BO75064 1496 aaPredicted RBP30.68■■■□□ 2.5
SSBP4-207ENST00000600244 FHOD3Q2V2M9 1422 aa30.67■■■□□ 2.5
SSBP4-207ENST00000600244 RICTORQ6R327 1708 aa30.65■■■□□ 2.5
SSBP4-207ENST00000600244 FANCAO15360 1455 aa30.64■■■□□ 2.5
SSBP4-207ENST00000600244 P3H3Q8IVL6 736 aa30.64■■■□□ 2.5
SSBP4-207ENST00000600244 AKNAQ7Z591 1439 aa30.63■■■□□ 2.49
SSBP4-207ENST00000600244 SIGLEC1Q9BZZ2 1709 aa30.61■■■□□ 2.49
SSBP4-207ENST00000600244 SPATA31D1Q6ZQQ2 1576 aa30.59■■■□□ 2.49
SSBP4-207ENST00000600244 PRXQ9BXM0 1461 aa30.58■■■□□ 2.49
SSBP4-207ENST00000600244 YEATS2Q9ULM3 1422 aa30.58■■■□□ 2.49
SSBP4-207ENST00000600244 TTC37Q6PGP7 1564 aa30.57■■■□□ 2.48
SSBP4-207ENST00000600244 ZMYM4Q5VZL5 1548 aa30.56■■■□□ 2.48
SSBP4-207ENST00000600244 DMRT2Q9Y5R5 561 aa30.55■■■□□ 2.48
SSBP4-207ENST00000600244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.54■■■□□ 2.48
SSBP4-207ENST00000600244 MLECQ14165 292 aa30.54■■■□□ 2.48
SSBP4-207ENST00000600244 HNRNPUL2Q1KMD3 747 aaKnown RBP30.54■■■□□ 2.48
SSBP4-207ENST00000600244 ZFYVE16Q7Z3T8 1539 aa30.52■■■□□ 2.48
SSBP4-207ENST00000600244 RAPGEF6Q8TEU7 1601 aa30.51■■■□□ 2.48
SSBP4-207ENST00000600244 MAGI2Q86UL8 1455 aa30.5■■■□□ 2.47
SSBP4-207ENST00000600244 EFCAB5A4FU69 1503 aa30.5■■■□□ 2.47
SSBP4-207ENST00000600244 FER1L4A9Z1Z3 1794 aa30.5■■■□□ 2.47
SSBP4-207ENST00000600244 STRCQ7RTU9 1775 aa30.49■■■□□ 2.47
SSBP4-207ENST00000600244 PREX1Q8TCU6 1659 aa30.47■■■□□ 2.47
SSBP4-207ENST00000600244 NUP153P49790 1475 aaKnown RBP30.47■■■□□ 2.47
SSBP4-207ENST00000600244 ARHGEF12Q9NZN5 1544 aa30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms