RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 UBTFP17480 764 aaKnown RBP19.95■□□□□ 0.78
TGFB1-204ENST00000600196 TNIKQ9UKE5 1360 aa19.95■□□□□ 0.78
TGFB1-204ENST00000600196 JPH4Q96JJ6 628 aa19.94■□□□□ 0.78
TGFB1-204ENST00000600196 IQGAP2Q13576 1575 aa19.91■□□□□ 0.78
TGFB1-204ENST00000600196 CTTNBP2Q8WZ74 1663 aa19.88■□□□□ 0.77
TGFB1-204ENST00000600196 SHROOM2Q13796 1616 aa19.87■□□□□ 0.77
TGFB1-204ENST00000600196 UGGT2Q9NYU1 1516 aa19.87■□□□□ 0.77
TGFB1-204ENST00000600196 CARMIL2Q6F5E8 1435 aa19.85■□□□□ 0.77
TGFB1-204ENST00000600196 DNAJC5Q9H3Z4 198 aa19.83■□□□□ 0.77
TGFB1-204ENST00000600196 PRG4Q92954 1404 aaPredicted RBP19.8■□□□□ 0.76
TGFB1-204ENST00000600196 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
TGFB1-204ENST00000600196 EFCAB5A4FU69 1503 aa19.78■□□□□ 0.76
TGFB1-204ENST00000600196 DISP1Q96F81 1524 aa19.74■□□□□ 0.75
TGFB1-204ENST00000600196 SAMD9Q5K651 1589 aa19.71■□□□□ 0.75
TGFB1-204ENST00000600196 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
TGFB1-204ENST00000600196 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
TGFB1-204ENST00000600196 KIAA0556O60303 1618 aa19.69■□□□□ 0.74
TGFB1-204ENST00000600196 CLIP1P30622 1438 aa19.68■□□□□ 0.74
TGFB1-204ENST00000600196 PTPRGP23470 1445 aa19.67■□□□□ 0.74
TGFB1-204ENST00000600196 CEP162Q5TB80 1403 aa19.67■□□□□ 0.74
TGFB1-204ENST00000600196 ARHGAP35Q9NRY4 1499 aa19.65■□□□□ 0.74
TGFB1-204ENST00000600196 FMN1Q68DA7 1419 aa19.63■□□□□ 0.73
TGFB1-204ENST00000600196 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
TGFB1-204ENST00000600196 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
TGFB1-204ENST00000600196 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
TGFB1-204ENST00000600196 ERCC6L2Q5T890 1561 aa19.59■□□□□ 0.73
TGFB1-204ENST00000600196 UHRF1BP1LA0JNW5 1464 aa19.56■□□□□ 0.72
TGFB1-204ENST00000600196 RANGAP1P46060 587 aaPredicted RBP19.56■□□□□ 0.72
TGFB1-204ENST00000600196 ARAP1Q96P48 1450 aa19.55■□□□□ 0.72
TGFB1-204ENST00000600196 FHOD3Q2V2M9 1422 aa19.55■□□□□ 0.72
TGFB1-204ENST00000600196 P3H3Q8IVL6 736 aa19.55■□□□□ 0.72
TGFB1-204ENST00000600196 UACAQ9BZF9 1416 aa19.55■□□□□ 0.72
TGFB1-204ENST00000600196 CYB5RLQ6IPT4 315 aa19.52■□□□□ 0.72
TGFB1-204ENST00000600196 ABCA8O94911 1581 aa19.49■□□□□ 0.71
TGFB1-204ENST00000600196 CASKIN1Q8WXD9 1431 aa19.48■□□□□ 0.71
TGFB1-204ENST00000600196 ABCC2Q92887 1545 aa19.46■□□□□ 0.71
TGFB1-204ENST00000600196 VPS8Q8N3P4 1428 aa19.46■□□□□ 0.71
TGFB1-204ENST00000600196 NPM1P06748 294 aaKnown RBP eCLIP19.45■□□□□ 0.7
TGFB1-204ENST00000600196 PLB1Q6P1J6 1458 aa19.43■□□□□ 0.7
TGFB1-204ENST00000600196 FYCO1Q9BQS8 1478 aa19.43■□□□□ 0.7
TGFB1-204ENST00000600196 RAPGEF6Q8TEU7 1601 aa19.43■□□□□ 0.7
TGFB1-204ENST00000600196 KDM5BQ9UGL1 1544 aa19.42■□□□□ 0.7
TGFB1-204ENST00000600196 TTBK1Q5TCY1 1321 aaPredicted RBP19.38■□□□□ 0.69
TGFB1-204ENST00000600196 CDK11AQ9UQ88 783 aaPredicted RBP19.38■□□□□ 0.69
TGFB1-204ENST00000600196 HECW1Q76N89 1606 aa19.37■□□□□ 0.69
TGFB1-204ENST00000600196 NUP153P49790 1475 aaKnown RBP19.37■□□□□ 0.69
TGFB1-204ENST00000600196 CCDC18Q5T9S5 1454 aa19.37■□□□□ 0.69
TGFB1-204ENST00000600196 ADCY10Q96PN6 1610 aa19.36■□□□□ 0.69
TGFB1-204ENST00000600196 MAP3K1Q13233 1512 aa19.36■□□□□ 0.69
TGFB1-204ENST00000600196 ATP10BO94823 1461 aa19.35■□□□□ 0.69
TGFB1-204ENST00000600196 EPRSP07814 1512 aaKnown RBP19.33■□□□□ 0.68
TGFB1-204ENST00000600196 PLEKHD1A6NEE1 506 aa19.31■□□□□ 0.68
TGFB1-204ENST00000600196 MAPKBP1O60336 1514 aa19.3■□□□□ 0.68
TGFB1-204ENST00000600196 APLP2Q06481 763 aa19.3■□□□□ 0.68
TGFB1-204ENST00000600196 PCF11O94913 1555 aaKnown RBP19.3■□□□□ 0.68
TGFB1-204ENST00000600196 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
TGFB1-204ENST00000600196 ZCCHC11Q5TAX3 1644 aaKnown RBP19.25■□□□□ 0.67
TGFB1-204ENST00000600196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.24■□□□□ 0.67
TGFB1-204ENST00000600196 HNRNPUL2Q1KMD3 747 aaKnown RBP19.24■□□□□ 0.67
TGFB1-204ENST00000600196 ASXL2Q76L83 1435 aa19.22■□□□□ 0.67
TGFB1-204ENST00000600196 WDR7Q9Y4E6 1490 aa19.21■□□□□ 0.67
TGFB1-204ENST00000600196 TROQ12816 1431 aaPredicted RBP19.2■□□□□ 0.66
TGFB1-204ENST00000600196 CDK13Q14004 1512 aaKnown RBP19.18■□□□□ 0.66
TGFB1-204ENST00000600196 TIAM1Q13009 1591 aa19.18■□□□□ 0.66
TGFB1-204ENST00000600196 MTUS2Q5JR59 1369 aa19.16■□□□□ 0.66
TGFB1-204ENST00000600196 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
TGFB1-204ENST00000600196 CFAP43Q8NDM7 1665 aa19.14■□□□□ 0.66
TGFB1-204ENST00000600196 LRRC9Q6ZRR7 1453 aa19.14■□□□□ 0.65
TGFB1-204ENST00000600196 GLI2P10070 1586 aa19.14■□□□□ 0.65
TGFB1-204ENST00000600196 LRRIQ1Q96JM4 1722 aa19.14■□□□□ 0.65
TGFB1-204ENST00000600196 ARID3CA6NKF2 412 aa19.13■□□□□ 0.65
TGFB1-204ENST00000600196 EHBP1L1Q8N3D4 1523 aa19.12■□□□□ 0.65
TGFB1-204ENST00000600196 KCNH8Q96L42 1107 aa19.07■□□□□ 0.64
TGFB1-204ENST00000600196 FAM69CQ0P6D2 419 aa19.06■□□□□ 0.64
TGFB1-204ENST00000600196 KANK4Q5T7N3 995 aaPredicted RBP19.06■□□□□ 0.64
TGFB1-204ENST00000600196 KIF14Q15058 1648 aa19.06■□□□□ 0.64
TGFB1-204ENST00000600196 MAGI3Q5TCQ9 1506 aa19.05■□□□□ 0.64
TGFB1-204ENST00000600196 ABCA9Q8IUA7 1624 aa19.04■□□□□ 0.64
TGFB1-204ENST00000600196 DIP2BQ9P265 1576 aa19.04■□□□□ 0.64
TGFB1-204ENST00000600196 ARAP3Q8WWN8 1544 aa19.04■□□□□ 0.64
TGFB1-204ENST00000600196 PHLDB1Q86UU1 1377 aa19.04■□□□□ 0.64
TGFB1-204ENST00000600196 SUPT6HQ7KZ85 1726 aaKnown RBP19.02■□□□□ 0.63
TGFB1-204ENST00000600196 PLCH2O75038 1416 aa19■□□□□ 0.63
TGFB1-204ENST00000600196 CD109Q6YHK3 1445 aa19■□□□□ 0.63
TGFB1-204ENST00000600196 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19■□□□□ 0.631e-6■■□□□ 11.6
TGFB1-204ENST00000600196 NCOA2Q15596 1464 aa18.99■□□□□ 0.63
TGFB1-204ENST00000600196 CCNB3Q8WWL7 1395 aa18.99■□□□□ 0.63
TGFB1-204ENST00000600196 EFCAB2Q5VUJ9 269 aa18.97■□□□□ 0.63
TGFB1-204ENST00000600196 MIA2Q96PC5 1412 aa18.97■□□□□ 0.63
TGFB1-204ENST00000600196 TEX14Q8IWB6 1497 aa18.97■□□□□ 0.63
TGFB1-204ENST00000600196 MAP3K4Q9Y6R4 1608 aa18.96■□□□□ 0.63
TGFB1-204ENST00000600196 TRHP20396 242 aaPredicted RBP18.96■□□□□ 0.63
TGFB1-204ENST00000600196 GPATCH8Q9UKJ3 1502 aaKnown RBP18.95■□□□□ 0.62
TGFB1-204ENST00000600196 KIF13AQ9H1H9 1805 aa18.94■□□□□ 0.62
TGFB1-204ENST00000600196 NEO1Q92859 1461 aa18.93■□□□□ 0.62
TGFB1-204ENST00000600196 MYOM3Q5VTT5 1437 aa18.92■□□□□ 0.62
TGFB1-204ENST00000600196 CFDP1Q9UEE9 299 aaPredicted RBP18.92■□□□□ 0.62
TGFB1-204ENST00000600196 RSPH4AQ5TD94 716 aa18.91■□□□□ 0.62
TGFB1-204ENST00000600196 TTC37Q6PGP7 1564 aa18.9■□□□□ 0.62
TGFB1-204ENST00000600196 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms