RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 NISCHQ9Y2I1 1504 aa29.04■■■□□ 2.24
TGFB1-204ENST00000600196 CCDC180Q9P1Z9 1646 aa25.64■■□□□ 1.7
TGFB1-204ENST00000600196 ABCC9O60706 1549 aa24.55■■□□□ 1.52
TGFB1-204ENST00000600196 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
TGFB1-204ENST00000600196 MYO15BQ96JP2 1530 aa24.19■■□□□ 1.46
TGFB1-204ENST00000600196 DCAF1Q9Y4B6 1507 aa24.19■■□□□ 1.46
TGFB1-204ENST00000600196 NACADO15069 1562 aa24.08■■□□□ 1.45
TGFB1-204ENST00000600196 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
TGFB1-204ENST00000600196 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.43
TGFB1-204ENST00000600196 SCRIBQ14160 1630 aa23.24■■□□□ 1.31
TGFB1-204ENST00000600196 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
TGFB1-204ENST00000600196 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
TGFB1-204ENST00000600196 BICRAQ9NZM4 1560 aa23.11■■□□□ 1.29
TGFB1-204ENST00000600196 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
TGFB1-204ENST00000600196 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
TGFB1-204ENST00000600196 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
TGFB1-204ENST00000600196 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
TGFB1-204ENST00000600196 SMARCA4P51532 1647 aa22.38■■□□□ 1.17
TGFB1-204ENST00000600196 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
TGFB1-204ENST00000600196 PEG3Q9GZU2 1588 aa22.28■■□□□ 1.16
TGFB1-204ENST00000600196 CC2D2AQ9P2K1 1620 aa22.28■■□□□ 1.16
TGFB1-204ENST00000600196 RSF1Q96T23 1441 aaPredicted RBP22.26■■□□□ 1.15
TGFB1-204ENST00000600196 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
TGFB1-204ENST00000600196 NCAPD3P42695 1498 aa22.24■■□□□ 1.15
TGFB1-204ENST00000600196 ATAD2BQ9ULI0 1458 aa22.22■■□□□ 1.15
TGFB1-204ENST00000600196 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
TGFB1-204ENST00000600196 HMGXB3Q12766 1538 aa22.11■■□□□ 1.13
TGFB1-204ENST00000600196 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
TGFB1-204ENST00000600196 WIZO95785 1651 aa22.01■■□□□ 1.11
TGFB1-204ENST00000600196 TOP2AP11388 1531 aaKnown RBP21.92■■□□□ 1.1
TGFB1-204ENST00000600196 SUPT5HO00267 1087 aaKnown RBP21.87■■□□□ 1.09
TGFB1-204ENST00000600196 CCDC88BA6NC98 1476 aa21.65■■□□□ 1.06
TGFB1-204ENST00000600196 CADPSQ9ULU8 1353 aa21.58■■□□□ 1.04
TGFB1-204ENST00000600196 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
TGFB1-204ENST00000600196 CFTRP13569 1480 aa21.52■■□□□ 1.04
TGFB1-204ENST00000600196 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
TGFB1-204ENST00000600196 NESP48681 1621 aa21.33■■□□□ 1.01
TGFB1-204ENST00000600196 PRDM2Q13029 1718 aa21.27■■□□□ 1
TGFB1-204ENST00000600196 FANCD2Q9BXW9 1451 aa21.25■□□□□ 0.99
TGFB1-204ENST00000600196 ERCC6Q03468 1493 aa21.2■□□□□ 0.98
TGFB1-204ENST00000600196 CEP164Q9UPV0 1460 aa21.19■□□□□ 0.98
TGFB1-204ENST00000600196 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
TGFB1-204ENST00000600196 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
TGFB1-204ENST00000600196 KIF21AQ7Z4S6 1674 aa21.07■□□□□ 0.96
TGFB1-204ENST00000600196 WDR62O43379 1518 aa21■□□□□ 0.95
TGFB1-204ENST00000600196 THOC2Q8NI27 1593 aaKnown RBP20.98■□□□□ 0.95
TGFB1-204ENST00000600196 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
TGFB1-204ENST00000600196 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
TGFB1-204ENST00000600196 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
TGFB1-204ENST00000600196 CUX2O14529 1486 aa20.95■□□□□ 0.94
TGFB1-204ENST00000600196 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
TGFB1-204ENST00000600196 CUX1P39880 1505 aa20.89■□□□□ 0.94
TGFB1-204ENST00000600196 TOP2BQ02880 1626 aa20.88■□□□□ 0.93
TGFB1-204ENST00000600196 BIVM-ERCC5R4GMW8 1640 aa20.85■□□□□ 0.93
TGFB1-204ENST00000600196 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
TGFB1-204ENST00000600196 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
TGFB1-204ENST00000600196 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
TGFB1-204ENST00000600196 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
TGFB1-204ENST00000600196 TRIM41Q8WV44 630 aa20.77■□□□□ 0.92
TGFB1-204ENST00000600196 SOGA1O94964 1423 aa20.76■□□□□ 0.91
TGFB1-204ENST00000600196 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
TGFB1-204ENST00000600196 WDR97A6NE52 1622 aa20.7■□□□□ 0.9
TGFB1-204ENST00000600196 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
TGFB1-204ENST00000600196 TARBP1Q13395 1621 aaKnown RBP20.67■□□□□ 0.9
TGFB1-204ENST00000600196 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
TGFB1-204ENST00000600196 KIF27Q86VH2 1401 aa20.56■□□□□ 0.88
TGFB1-204ENST00000600196 EEA1Q15075 1411 aa20.53■□□□□ 0.88
TGFB1-204ENST00000600196 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
TGFB1-204ENST00000600196 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
TGFB1-204ENST00000600196 ZNF608Q9ULD9 1512 aaPredicted RBP20.51■□□□□ 0.87
TGFB1-204ENST00000600196 GRIN2BQ13224 1484 aa20.49■□□□□ 0.87
TGFB1-204ENST00000600196 ABCA5Q8WWZ7 1642 aa20.48■□□□□ 0.87
TGFB1-204ENST00000600196 AQRO60306 1485 aaKnown RBP eCLIP20.48■□□□□ 0.875e-7■■■■□ 24.7
TGFB1-204ENST00000600196 ERICH3Q5RHP9 1530 aa20.46■□□□□ 0.87
TGFB1-204ENST00000600196 EIF4G3O43432 1585 aaKnown RBP20.44■□□□□ 0.86
TGFB1-204ENST00000600196 IGF1RP08069 1367 aa20.43■□□□□ 0.86
TGFB1-204ENST00000600196 MAGI1Q96QZ7 1491 aaPredicted RBP20.41■□□□□ 0.86
TGFB1-204ENST00000600196 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
TGFB1-204ENST00000600196 FHAD1B1AJZ9 1412 aa20.35■□□□□ 0.85
TGFB1-204ENST00000600196 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
TGFB1-204ENST00000600196 RUSC2Q8N2Y8 1516 aa20.31■□□□□ 0.84
TGFB1-204ENST00000600196 CUL7Q14999 1698 aa20.3■□□□□ 0.84
TGFB1-204ENST00000600196 CARMIL1Q5VZK9 1371 aa20.3■□□□□ 0.84
TGFB1-204ENST00000600196 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
TGFB1-204ENST00000600196 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
TGFB1-204ENST00000600196 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
TGFB1-204ENST00000600196 PRXQ9BXM0 1461 aa20.25■□□□□ 0.83
TGFB1-204ENST00000600196 ADAMTS12P58397 1594 aa20.24■□□□□ 0.83
TGFB1-204ENST00000600196 RAPGEF2Q9Y4G8 1499 aa20.23■□□□□ 0.83
TGFB1-204ENST00000600196 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
TGFB1-204ENST00000600196 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
TGFB1-204ENST00000600196 KIF21BO75037 1637 aa20.14■□□□□ 0.81
TGFB1-204ENST00000600196 FBLN2P98095 1184 aa20.14■□□□□ 0.81
TGFB1-204ENST00000600196 FAM9AQ8IZU1 332 aaPredicted RBP20.14■□□□□ 0.81
TGFB1-204ENST00000600196 NUP160Q12769 1436 aa20.12■□□□□ 0.81
TGFB1-204ENST00000600196 GOLGA3Q08378 1498 aa20.06■□□□□ 0.8
TGFB1-204ENST00000600196 CHD1O14646 1710 aa20.06■□□□□ 0.8
TGFB1-204ENST00000600196 KIAA0586Q9BVV6 1533 aa20.06■□□□□ 0.8
TGFB1-204ENST00000600196 CEP170Q5SW79 1584 aa19.98■□□□□ 0.79
TGFB1-204ENST00000600196 CLASP1Q7Z460 1538 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms