RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 CTTNBP2Q8WZ74 1663 aa31.04■■■□□ 2.56
COPE-209ENST00000599964 UBTFP17480 764 aaKnown RBP31■■■□□ 2.55
COPE-209ENST00000599964 EHMT2Q96KQ7 1210 aa31■■■□□ 2.55
COPE-209ENST00000599964 IQGAP2Q13576 1575 aa31■■■□□ 2.55
COPE-209ENST00000599964 JPH4Q96JJ6 628 aa30.93■■■□□ 2.54
COPE-209ENST00000599964 SHROOM2Q13796 1616 aa30.93■■■□□ 2.54
COPE-209ENST00000599964 DNAJC5Q9H3Z4 198 aa30.91■■■□□ 2.54
COPE-209ENST00000599964 UGGT2Q9NYU1 1516 aa30.83■■■□□ 2.53
COPE-209ENST00000599964 PRG4Q92954 1404 aaPredicted RBP30.82■■■□□ 2.52
COPE-209ENST00000599964 CARMIL2Q6F5E8 1435 aa30.8■■■□□ 2.52
COPE-209ENST00000599964 TNIKQ9UKE5 1360 aa30.79■■■□□ 2.52
COPE-209ENST00000599964 ARHGEF11O15085 1522 aa30.79■■■□□ 2.52
COPE-209ENST00000599964 LOC105371045A0A1W2PR82 267 aa30.75■■■□□ 2.51
COPE-209ENST00000599964 RIMBP3CA6NJZ7 1639 aa30.73■■■□□ 2.51
COPE-209ENST00000599964 RIMBP3BA6NNM3 1639 aa30.73■■■□□ 2.51
COPE-209ENST00000599964 RIMBP3Q9UFD9 1639 aa30.73■■■□□ 2.51
COPE-209ENST00000599964 RANGAP1P46060 587 aaPredicted RBP30.69■■■□□ 2.5
COPE-209ENST00000599964 ERCC6L2Q5T890 1561 aa30.69■■■□□ 2.5
COPE-209ENST00000599964 DISP1Q96F81 1524 aa30.68■■■□□ 2.5
COPE-209ENST00000599964 KIAA0556O60303 1618 aa30.67■■■□□ 2.5
COPE-209ENST00000599964 EFCAB5A4FU69 1503 aa30.67■■■□□ 2.5
COPE-209ENST00000599964 SAMD9Q5K651 1589 aa30.64■■■□□ 2.5
COPE-209ENST00000599964 ARAP1Q96P48 1450 aa30.56■■■□□ 2.48
COPE-209ENST00000599964 CLIP1P30622 1438 aa30.56■■■□□ 2.48
COPE-209ENST00000599964 P3H3Q8IVL6 736 aa30.55■■■□□ 2.48
COPE-209ENST00000599964 PTPRGP23470 1445 aa30.55■■■□□ 2.48
COPE-209ENST00000599964 CEP162Q5TB80 1403 aa30.53■■■□□ 2.48
COPE-209ENST00000599964 ARHGAP35Q9NRY4 1499 aa30.51■■■□□ 2.48
COPE-209ENST00000599964 TTBK1Q5TCY1 1321 aaPredicted RBP30.49■■■□□ 2.47
COPE-209ENST00000599964 CYB5RLQ6IPT4 315 aa30.49■■■□□ 2.47
COPE-209ENST00000599964 FHOD3Q2V2M9 1422 aa30.47■■■□□ 2.47
COPE-209ENST00000599964 FMN1Q68DA7 1419 aa30.38■■■□□ 2.45
COPE-209ENST00000599964 UACAQ9BZF9 1416 aa30.35■■■□□ 2.45
COPE-209ENST00000599964 PLB1Q6P1J6 1458 aa30.3■■■□□ 2.44
COPE-209ENST00000599964 ABCA8O94911 1581 aa30.29■■■□□ 2.44
COPE-209ENST00000599964 UHRF1BP1LA0JNW5 1464 aa30.29■■■□□ 2.44
COPE-209ENST00000599964 ABCC2Q92887 1545 aa30.28■■■□□ 2.44
COPE-209ENST00000599964 RAPGEF6Q8TEU7 1601 aa30.26■■■□□ 2.44
COPE-209ENST00000599964 ADCY10Q96PN6 1610 aa30.25■■■□□ 2.43
COPE-209ENST00000599964 NPM1P06748 294 aaKnown RBP eCLIP30.23■■■□□ 2.43
COPE-209ENST00000599964 HECW1Q76N89 1606 aa30.17■■■□□ 2.42
COPE-209ENST00000599964 CASKIN1Q8WXD9 1431 aa30.16■■■□□ 2.42
COPE-209ENST00000599964 ATP1B4Q9UN42 357 aaPredicted RBP30.15■■■□□ 2.42
COPE-209ENST00000599964 VPS8Q8N3P4 1428 aa30.14■■■□□ 2.42
COPE-209ENST00000599964 FYCO1Q9BQS8 1478 aa30.13■■■□□ 2.41
COPE-209ENST00000599964 PCF11O94913 1555 aaKnown RBP30.13■■■□□ 2.41
COPE-209ENST00000599964 KDM5BQ9UGL1 1544 aa30.12■■■□□ 2.41
COPE-209ENST00000599964 NUP153P49790 1475 aaKnown RBP30.12■■■□□ 2.41
COPE-209ENST00000599964 ZCCHC11Q5TAX3 1644 aaKnown RBP30.07■■■□□ 2.4
COPE-209ENST00000599964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.05■■■□□ 2.4
COPE-209ENST00000599964 HNRNPUL2Q1KMD3 747 aaKnown RBP30.05■■■□□ 2.4
COPE-209ENST00000599964 ARID3CA6NKF2 412 aa30.04■■■□□ 2.4
COPE-209ENST00000599964 ATP10BO94823 1461 aa30.04■■■□□ 2.4
COPE-209ENST00000599964 CCDC18Q5T9S5 1454 aa30.03■■■□□ 2.4
COPE-209ENST00000599964 EPRSP07814 1512 aaKnown RBP30.02■■■□□ 2.4
COPE-209ENST00000599964 MAPKBP1O60336 1514 aa30■■■□□ 2.39
COPE-209ENST00000599964 CDK13Q14004 1512 aaKnown RBP29.96■■■□□ 2.39
COPE-209ENST00000599964 CDK11AQ9UQ88 783 aaPredicted RBP29.96■■■□□ 2.39
COPE-209ENST00000599964 ASXL2Q76L83 1435 aa29.94■■■□□ 2.38
COPE-209ENST00000599964 LRRIQ1Q96JM4 1722 aa29.93■■■□□ 2.38
COPE-209ENST00000599964 PLEKHD1A6NEE1 506 aa29.91■■■□□ 2.38
COPE-209ENST00000599964 APLP2Q06481 763 aa29.9■■■□□ 2.38
COPE-209ENST00000599964 WDR7Q9Y4E6 1490 aa29.89■■■□□ 2.38
COPE-209ENST00000599964 MAP3K1Q13233 1512 aa29.83■■■□□ 2.37
COPE-209ENST00000599964 CFAP43Q8NDM7 1665 aa29.82■■■□□ 2.36
COPE-209ENST00000599964 TIAM1Q13009 1591 aa29.81■■■□□ 2.36
COPE-209ENST00000599964 ABCC10Q5T3U5 1492 aa29.78■■■□□ 2.36
COPE-209ENST00000599964 TROQ12816 1431 aaPredicted RBP29.78■■■□□ 2.36
COPE-209ENST00000599964 KCNH8Q96L42 1107 aa29.77■■■□□ 2.36
COPE-209ENST00000599964 MTUS2Q5JR59 1369 aa29.77■■■□□ 2.36
COPE-209ENST00000599964 DIP2BQ9P265 1576 aa29.74■■■□□ 2.35
COPE-209ENST00000599964 TRHP20396 242 aaPredicted RBP29.74■■■□□ 2.35
COPE-209ENST00000599964 EHBP1L1Q8N3D4 1523 aa29.71■■■□□ 2.35
COPE-209ENST00000599964 FAM69CQ0P6D2 419 aa29.71■■■□□ 2.35
COPE-209ENST00000599964 GLI2P10070 1586 aa29.7■■■□□ 2.35
COPE-209ENST00000599964 KIF14Q15058 1648 aa29.7■■■□□ 2.34
COPE-209ENST00000599964 MAGI3Q5TCQ9 1506 aa29.7■■■□□ 2.34
COPE-209ENST00000599964 LRRC9Q6ZRR7 1453 aa29.68■■■□□ 2.34
COPE-209ENST00000599964 KIF13AQ9H1H9 1805 aa29.66■■■□□ 2.34
COPE-209ENST00000599964 ABCA9Q8IUA7 1624 aa29.63■■■□□ 2.33
COPE-209ENST00000599964 KANK4Q5T7N3 995 aaPredicted RBP29.6■■■□□ 2.33
COPE-209ENST00000599964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.6■■■□□ 2.332e-7■□□□□ 9.6
COPE-209ENST00000599964 SUPT6HQ7KZ85 1726 aaKnown RBP29.59■■■□□ 2.33
COPE-209ENST00000599964 MAP3K4Q9Y6R4 1608 aa29.57■■■□□ 2.32
COPE-209ENST00000599964 CD109Q6YHK3 1445 aa29.56■■■□□ 2.32
COPE-209ENST00000599964 TTC37Q6PGP7 1564 aa29.55■■■□□ 2.32
COPE-209ENST00000599964 NCOA2Q15596 1464 aa29.5■■■□□ 2.31
COPE-209ENST00000599964 MYO5CQ9NQX4 1742 aa29.5■■■□□ 2.31
COPE-209ENST00000599964 CCNB3Q8WWL7 1395 aa29.49■■■□□ 2.31
COPE-209ENST00000599964 TEX14Q8IWB6 1497 aa29.48■■■□□ 2.31
COPE-209ENST00000599964 TSPOAP1O95153 1857 aa29.47■■■□□ 2.31
COPE-209ENST00000599964 PLCH2O75038 1416 aa29.45■■■□□ 2.31
COPE-209ENST00000599964 ARAP3Q8WWN8 1544 aa29.44■■■□□ 2.3
COPE-209ENST00000599964 ITSN2Q9NZM3 1697 aa29.43■■■□□ 2.3
COPE-209ENST00000599964 PREX2Q70Z35 1606 aa29.42■■■□□ 2.3
COPE-209ENST00000599964 CDC42BPAQ5VT25 1732 aa29.41■■■□□ 2.3
COPE-209ENST00000599964 GPATCH8Q9UKJ3 1502 aaKnown RBP29.4■■■□□ 2.3
COPE-209ENST00000599964 CFAP74Q9C0B2 1584 aa29.4■■■□□ 2.3
COPE-209ENST00000599964 ARHGAP5Q13017 1502 aa29.4■■■□□ 2.3
COPE-209ENST00000599964 PPRC1Q5VV67 1664 aaKnown RBP29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms