RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 CHMP7Q8WUX9 453 aaPredicted RBP35.73■■■■□ 3.31
LTBP4-224ENST00000599016 CHD1O14646 1710 aa35.71■■■■□ 3.31
LTBP4-224ENST00000599016 GOLGA3Q08378 1498 aa35.67■■■■□ 3.3
LTBP4-224ENST00000599016 GRIN2AQ12879 1464 aa35.67■■■■□ 3.3
LTBP4-224ENST00000599016 EHMT2Q96KQ7 1210 aa35.61■■■■□ 3.29
LTBP4-224ENST00000599016 UBTFP17480 764 aaKnown RBP35.52■■■■□ 3.28
LTBP4-224ENST00000599016 LOC105371045A0A1W2PR82 267 aa35.49■■■■□ 3.27
LTBP4-224ENST00000599016 CTTNBP2Q8WZ74 1663 aa35.47■■■■□ 3.27
LTBP4-224ENST00000599016 CEP170Q5SW79 1584 aa35.44■■■■□ 3.26
LTBP4-224ENST00000599016 NUP160Q12769 1436 aa35.44■■■■□ 3.26
LTBP4-224ENST00000599016 TNIKQ9UKE5 1360 aa35.37■■■■□ 3.25
LTBP4-224ENST00000599016 AEBP2Q6ZN18 517 aaPredicted RBP35.36■■■■□ 3.25
LTBP4-224ENST00000599016 CLASP1Q7Z460 1538 aa35.36■■■■□ 3.25
LTBP4-224ENST00000599016 KIAA0586Q9BVV6 1533 aa35.35■■■■□ 3.25
LTBP4-224ENST00000599016 IQGAP2Q13576 1575 aa35.3■■■■□ 3.24
LTBP4-224ENST00000599016 RANGAP1P46060 587 aaPredicted RBP35.12■■■■□ 3.21
LTBP4-224ENST00000599016 JPH4Q96JJ6 628 aa35.11■■■■□ 3.21
LTBP4-224ENST00000599016 UGGT2Q9NYU1 1516 aa35.11■■■■□ 3.21
LTBP4-224ENST00000599016 SHROOM2Q13796 1616 aa35.1■■■■□ 3.21
LTBP4-224ENST00000599016 CEP162Q5TB80 1403 aa35.07■■■■□ 3.21
LTBP4-224ENST00000599016 CLIP1P30622 1438 aa35.04■■■■□ 3.2
LTBP4-224ENST00000599016 EFCAB5A4FU69 1503 aa35.02■■■■□ 3.2
LTBP4-224ENST00000599016 SAMD9Q5K651 1589 aa34.99■■■■□ 3.19
LTBP4-224ENST00000599016 CARMIL2Q6F5E8 1435 aa34.98■■■■□ 3.19
LTBP4-224ENST00000599016 PRG4Q92954 1404 aaPredicted RBP34.98■■■■□ 3.19
LTBP4-224ENST00000599016 DISP1Q96F81 1524 aa34.94■■■■□ 3.18
LTBP4-224ENST00000599016 KIAA0556O60303 1618 aa34.94■■■■□ 3.18
LTBP4-224ENST00000599016 ARHGAP35Q9NRY4 1499 aa34.93■■■■□ 3.18
LTBP4-224ENST00000599016 ERCC6L2Q5T890 1561 aa34.91■■■■□ 3.18
LTBP4-224ENST00000599016 P3H3Q8IVL6 736 aa34.88■■■■□ 3.17
LTBP4-224ENST00000599016 FHOD3Q2V2M9 1422 aa34.81■■■■□ 3.16
LTBP4-224ENST00000599016 PTPRGP23470 1445 aa34.69■■■■□ 3.14
LTBP4-224ENST00000599016 FMN1Q68DA7 1419 aa34.69■■■■□ 3.14
LTBP4-224ENST00000599016 TTBK1Q5TCY1 1321 aaPredicted RBP34.68■■■■□ 3.14
LTBP4-224ENST00000599016 VPS8Q8N3P4 1428 aa34.61■■■■□ 3.13
LTBP4-224ENST00000599016 RAPGEF6Q8TEU7 1601 aa34.52■■■■□ 3.12
LTBP4-224ENST00000599016 PCF11O94913 1555 aaKnown RBP34.49■■■■□ 3.11
LTBP4-224ENST00000599016 CASKIN1Q8WXD9 1431 aa34.49■■■■□ 3.11
LTBP4-224ENST00000599016 ABCA8O94911 1581 aa34.49■■■■□ 3.11
LTBP4-224ENST00000599016 UACAQ9BZF9 1416 aa34.47■■■■□ 3.11
LTBP4-224ENST00000599016 PLB1Q6P1J6 1458 aa34.47■■■■□ 3.11
LTBP4-224ENST00000599016 FYCO1Q9BQS8 1478 aa34.46■■■■□ 3.11
LTBP4-224ENST00000599016 HECW1Q76N89 1606 aa34.45■■■■□ 3.11
LTBP4-224ENST00000599016 ATP1B4Q9UN42 357 aaPredicted RBP34.44■■■■□ 3.1
LTBP4-224ENST00000599016 KIF13AQ9H1H9 1805 aa34.41■■■■□ 3.1
LTBP4-224ENST00000599016 ABCC2Q92887 1545 aa34.4■■■■□ 3.1
LTBP4-224ENST00000599016 UHRF1BP1LA0JNW5 1464 aa34.39■■■■□ 3.1
LTBP4-224ENST00000599016 FAM69CQ0P6D2 419 aa34.35■■■■□ 3.09
LTBP4-224ENST00000599016 NUP153P49790 1475 aaKnown RBP34.33■■■■□ 3.09
LTBP4-224ENST00000599016 ADCY10Q96PN6 1610 aa34.33■■■■□ 3.09
LTBP4-224ENST00000599016 APLP2Q06481 763 aa34.31■■■■□ 3.08
LTBP4-224ENST00000599016 LRRIQ1Q96JM4 1722 aa34.3■■■■□ 3.08
LTBP4-224ENST00000599016 CCDC18Q5T9S5 1454 aa34.29■■■■□ 3.08
LTBP4-224ENST00000599016 EPRSP07814 1512 aaKnown RBP34.27■■■■□ 3.08
LTBP4-224ENST00000599016 KDM4FA0A1W2PPD8 638 aa34.26■■■■□ 3.08
LTBP4-224ENST00000599016 ABCC10Q5T3U5 1492 aa34.25■■■■□ 3.07
LTBP4-224ENST00000599016 ARID3CA6NKF2 412 aa34.23■■■■□ 3.07
LTBP4-224ENST00000599016 CFAP43Q8NDM7 1665 aa34.22■■■■□ 3.07
LTBP4-224ENST00000599016 KDM5BQ9UGL1 1544 aa34.21■■■■□ 3.07
LTBP4-224ENST00000599016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.21■■■■□ 3.07
LTBP4-224ENST00000599016 HNRNPUL2Q1KMD3 747 aaKnown RBP34.21■■■■□ 3.07
LTBP4-224ENST00000599016 ATP10BO94823 1461 aa34.2■■■■□ 3.07
LTBP4-224ENST00000599016 MAP3K1Q13233 1512 aa34.2■■■■□ 3.07
LTBP4-224ENST00000599016 CDK13Q14004 1512 aaKnown RBP34.2■■■■□ 3.07
LTBP4-224ENST00000599016 NPM1P06748 294 aaKnown RBP eCLIP34.2■■■■□ 3.07
LTBP4-224ENST00000599016 TIAM1Q13009 1591 aa34.19■■■■□ 3.06
LTBP4-224ENST00000599016 ZCCHC11Q5TAX3 1644 aaKnown RBP34.19■■■■□ 3.06
LTBP4-224ENST00000599016 CDK11AQ9UQ88 783 aaPredicted RBP34.13■■■■□ 3.05
LTBP4-224ENST00000599016 DIP2BQ9P265 1576 aa34.09■■■■□ 3.05
LTBP4-224ENST00000599016 MAPKBP1O60336 1514 aa34.08■■■■□ 3.05
LTBP4-224ENST00000599016 PLEKHD1A6NEE1 506 aa34.04■■■■□ 3.04
LTBP4-224ENST00000599016 MTUS2Q5JR59 1369 aa34.02■■■■□ 3.04
LTBP4-224ENST00000599016 ILDR1Q86SU0 546 aaPredicted RBP34.02■■■■□ 3.04
LTBP4-224ENST00000599016 LRRC9Q6ZRR7 1453 aa34.01■■■■□ 3.03
LTBP4-224ENST00000599016 EHBP1L1Q8N3D4 1523 aa33.99■■■■□ 3.03
LTBP4-224ENST00000599016 KANK4Q5T7N3 995 aaPredicted RBP33.97■■■■□ 3.03
LTBP4-224ENST00000599016 MAGI3Q5TCQ9 1506 aa33.96■■■■□ 3.03
LTBP4-224ENST00000599016 KDM6BO15054 1643 aa33.96■■■■□ 3.03
LTBP4-224ENST00000599016 TROQ12816 1431 aaPredicted RBP33.96■■■■□ 3.03
LTBP4-224ENST00000599016 ASXL2Q76L83 1435 aa33.95■■■■□ 3.02
LTBP4-224ENST00000599016 WDR7Q9Y4E6 1490 aa33.92■■■■□ 3.02
LTBP4-224ENST00000599016 PPARGC1BQ86YN6 1023 aaKnown RBP33.89■■■■□ 3.02
LTBP4-224ENST00000599016 SUPT6HQ7KZ85 1726 aaKnown RBP33.89■■■■□ 3.02
LTBP4-224ENST00000599016 KIF14Q15058 1648 aa33.86■■■■□ 3.01
LTBP4-224ENST00000599016 TSPOAP1O95153 1857 aa33.85■■■■□ 3.01
LTBP4-224ENST00000599016 KCNH8Q96L42 1107 aa33.83■■■■□ 3.01
LTBP4-224ENST00000599016 NCOA2Q15596 1464 aa33.76■■■■□ 3
LTBP4-224ENST00000599016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.69■■■□□ 2.985e-7■■■■□ 19.3
LTBP4-224ENST00000599016 ABCA9Q8IUA7 1624 aa33.68■■■□□ 2.98
LTBP4-224ENST00000599016 CCNB3Q8WWL7 1395 aa33.67■■■□□ 2.98
LTBP4-224ENST00000599016 TTC37Q6PGP7 1564 aa33.66■■■□□ 2.98
LTBP4-224ENST00000599016 GLI2P10070 1586 aa33.65■■■□□ 2.98
LTBP4-224ENST00000599016 ITSN2Q9NZM3 1697 aa33.64■■■□□ 2.98
LTBP4-224ENST00000599016 COL17A1Q9UMD9 1497 aaPredicted RBP33.63■■■□□ 2.97
LTBP4-224ENST00000599016 MYO5CQ9NQX4 1742 aa33.63■■■□□ 2.97
LTBP4-224ENST00000599016 ADGRL1O94910 1474 aa33.63■■■□□ 2.97
LTBP4-224ENST00000599016 CDC42BPAQ5VT25 1732 aa33.61■■■□□ 2.97
LTBP4-224ENST00000599016 PHLDB1Q86UU1 1377 aa33.6■■■□□ 2.97
LTBP4-224ENST00000599016 PPRC1Q5VV67 1664 aaKnown RBP33.59■■■□□ 2.97
LTBP4-224ENST00000599016 MYOM3Q5VTT5 1437 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms