RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 CEP170Q5SW79 1584 aa31.21■■■□□ 2.59
LTBP4-223ENST00000598717 TNIKQ9UKE5 1360 aa31.17■■■□□ 2.58
LTBP4-223ENST00000598717 KIAA0586Q9BVV6 1533 aa31.16■■■□□ 2.58
LTBP4-223ENST00000598717 CTTNBP2Q8WZ74 1663 aa31.13■■■□□ 2.57
LTBP4-223ENST00000598717 IQGAP2Q13576 1575 aa31.08■■■□□ 2.57
LTBP4-223ENST00000598717 RANGAP1P46060 587 aaPredicted RBP31.05■■■□□ 2.56
LTBP4-223ENST00000598717 CLASP1Q7Z460 1538 aa31.03■■■□□ 2.56
LTBP4-223ENST00000598717 JPH4Q96JJ6 628 aa31.01■■■□□ 2.55
LTBP4-223ENST00000598717 CEP162Q5TB80 1403 aa30.92■■■□□ 2.54
LTBP4-223ENST00000598717 UGGT2Q9NYU1 1516 aa30.92■■■□□ 2.54
LTBP4-223ENST00000598717 CLIP1P30622 1438 aa30.9■■■□□ 2.54
LTBP4-223ENST00000598717 SHROOM2Q13796 1616 aa30.87■■■□□ 2.53
LTBP4-223ENST00000598717 PRG4Q92954 1404 aaPredicted RBP30.86■■■□□ 2.53
LTBP4-223ENST00000598717 CARMIL2Q6F5E8 1435 aa30.85■■■□□ 2.53
LTBP4-223ENST00000598717 EFCAB5A4FU69 1503 aa30.83■■■□□ 2.53
LTBP4-223ENST00000598717 P3H3Q8IVL6 736 aa30.81■■■□□ 2.52
LTBP4-223ENST00000598717 DISP1Q96F81 1524 aa30.79■■■□□ 2.52
LTBP4-223ENST00000598717 ARHGAP35Q9NRY4 1499 aa30.79■■■□□ 2.52
LTBP4-223ENST00000598717 SAMD9Q5K651 1589 aa30.79■■■□□ 2.52
LTBP4-223ENST00000598717 KIAA0556O60303 1618 aa30.76■■■□□ 2.51
LTBP4-223ENST00000598717 FHOD3Q2V2M9 1422 aa30.71■■■□□ 2.51
LTBP4-223ENST00000598717 ERCC6L2Q5T890 1561 aa30.69■■■□□ 2.5
LTBP4-223ENST00000598717 TTBK1Q5TCY1 1321 aaPredicted RBP30.67■■■□□ 2.5
LTBP4-223ENST00000598717 ARAP1Q96P48 1450 aa30.65■■■□□ 2.5
LTBP4-223ENST00000598717 ARHGEF11O15085 1522 aa30.62■■■□□ 2.49
LTBP4-223ENST00000598717 PTPRGP23470 1445 aa30.61■■■□□ 2.49
LTBP4-223ENST00000598717 FMN1Q68DA7 1419 aa30.57■■■□□ 2.48
LTBP4-223ENST00000598717 RIMBP3CA6NJZ7 1639 aa30.52■■■□□ 2.48
LTBP4-223ENST00000598717 RIMBP3BA6NNM3 1639 aa30.52■■■□□ 2.48
LTBP4-223ENST00000598717 RIMBP3Q9UFD9 1639 aa30.52■■■□□ 2.48
LTBP4-223ENST00000598717 VPS8Q8N3P4 1428 aa30.5■■■□□ 2.47
LTBP4-223ENST00000598717 DNAJC5Q9H3Z4 198 aa30.48■■■□□ 2.47
LTBP4-223ENST00000598717 ATP1B4Q9UN42 357 aaPredicted RBP30.44■■■□□ 2.46
LTBP4-223ENST00000598717 PLB1Q6P1J6 1458 aa30.41■■■□□ 2.46
LTBP4-223ENST00000598717 UACAQ9BZF9 1416 aa30.4■■■□□ 2.46
LTBP4-223ENST00000598717 CASKIN1Q8WXD9 1431 aa30.39■■■□□ 2.46
LTBP4-223ENST00000598717 CYB5RLQ6IPT4 315 aa30.38■■■□□ 2.45
LTBP4-223ENST00000598717 RAPGEF6Q8TEU7 1601 aa30.37■■■□□ 2.45
LTBP4-223ENST00000598717 ABCA8O94911 1581 aa30.37■■■□□ 2.45
LTBP4-223ENST00000598717 PCF11O94913 1555 aaKnown RBP30.37■■■□□ 2.45
LTBP4-223ENST00000598717 FYCO1Q9BQS8 1478 aa30.35■■■□□ 2.45
LTBP4-223ENST00000598717 HECW1Q76N89 1606 aa30.31■■■□□ 2.44
LTBP4-223ENST00000598717 ABCC2Q92887 1545 aa30.3■■■□□ 2.44
LTBP4-223ENST00000598717 UHRF1BP1LA0JNW5 1464 aa30.3■■■□□ 2.44
LTBP4-223ENST00000598717 APLP2Q06481 763 aa30.29■■■□□ 2.44
LTBP4-223ENST00000598717 NUP153P49790 1475 aaKnown RBP30.26■■■□□ 2.44
LTBP4-223ENST00000598717 ARID3CA6NKF2 412 aa30.26■■■□□ 2.43
LTBP4-223ENST00000598717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.23■■■□□ 2.43
LTBP4-223ENST00000598717 HNRNPUL2Q1KMD3 747 aaKnown RBP30.23■■■□□ 2.43
LTBP4-223ENST00000598717 ADCY10Q96PN6 1610 aa30.22■■■□□ 2.43
LTBP4-223ENST00000598717 EPRSP07814 1512 aaKnown RBP30.21■■■□□ 2.43
LTBP4-223ENST00000598717 CCDC18Q5T9S5 1454 aa30.2■■■□□ 2.43
LTBP4-223ENST00000598717 NPM1P06748 294 aaKnown RBP eCLIP30.2■■■□□ 2.43
LTBP4-223ENST00000598717 ATP10BO94823 1461 aa30.16■■■□□ 2.42
LTBP4-223ENST00000598717 CDK13Q14004 1512 aaKnown RBP30.14■■■□□ 2.42
LTBP4-223ENST00000598717 KDM5BQ9UGL1 1544 aa30.14■■■□□ 2.42
LTBP4-223ENST00000598717 CDK11AQ9UQ88 783 aaPredicted RBP30.12■■■□□ 2.41
LTBP4-223ENST00000598717 LRRIQ1Q96JM4 1722 aa30.11■■■□□ 2.41
LTBP4-223ENST00000598717 MAP3K1Q13233 1512 aa30.11■■■□□ 2.41
LTBP4-223ENST00000598717 TIAM1Q13009 1591 aa30.09■■■□□ 2.41
LTBP4-223ENST00000598717 ZCCHC11Q5TAX3 1644 aaKnown RBP30.07■■■□□ 2.4
LTBP4-223ENST00000598717 PLEKHD1A6NEE1 506 aa30.06■■■□□ 2.4
LTBP4-223ENST00000598717 CFAP43Q8NDM7 1665 aa30.05■■■□□ 2.4
LTBP4-223ENST00000598717 MTUS2Q5JR59 1369 aa30.01■■■□□ 2.39
LTBP4-223ENST00000598717 KANK4Q5T7N3 995 aaPredicted RBP29.99■■■□□ 2.39
LTBP4-223ENST00000598717 LRRC9Q6ZRR7 1453 aa29.98■■■□□ 2.39
LTBP4-223ENST00000598717 PPARGC1BQ86YN6 1023 aaKnown RBP29.96■■■□□ 2.39
LTBP4-223ENST00000598717 TROQ12816 1431 aaPredicted RBP29.94■■■□□ 2.38
LTBP4-223ENST00000598717 ASXL2Q76L83 1435 aa29.94■■■□□ 2.38
LTBP4-223ENST00000598717 MAGI3Q5TCQ9 1506 aa29.92■■■□□ 2.38
LTBP4-223ENST00000598717 EHBP1L1Q8N3D4 1523 aa29.92■■■□□ 2.38
LTBP4-223ENST00000598717 WDR7Q9Y4E6 1490 aa29.9■■■□□ 2.38
LTBP4-223ENST00000598717 MAPKBP1O60336 1514 aa29.89■■■□□ 2.38
LTBP4-223ENST00000598717 KCNH8Q96L42 1107 aa29.88■■■□□ 2.37
LTBP4-223ENST00000598717 KIF14Q15058 1648 aa29.79■■■□□ 2.36
LTBP4-223ENST00000598717 SUPT6HQ7KZ85 1726 aaKnown RBP29.79■■■□□ 2.36
LTBP4-223ENST00000598717 NCOA2Q15596 1464 aa29.76■■■□□ 2.35
LTBP4-223ENST00000598717 CCNB3Q8WWL7 1395 aa29.7■■■□□ 2.35
LTBP4-223ENST00000598717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.69■■■□□ 2.349e-7■■■□□ 18.5
LTBP4-223ENST00000598717 ABCC10Q5T3U5 1492 aa29.68■■■□□ 2.34
LTBP4-223ENST00000598717 FAM69CQ0P6D2 419 aa29.67■■■□□ 2.34
LTBP4-223ENST00000598717 PHLDB1Q86UU1 1377 aa29.64■■■□□ 2.34
LTBP4-223ENST00000598717 TTC37Q6PGP7 1564 aa29.63■■■□□ 2.33
LTBP4-223ENST00000598717 DIP2BQ9P265 1576 aa29.63■■■□□ 2.33
LTBP4-223ENST00000598717 ABCA9Q8IUA7 1624 aa29.63■■■□□ 2.33
LTBP4-223ENST00000598717 GLI2P10070 1586 aa29.62■■■□□ 2.33
LTBP4-223ENST00000598717 MYOM3Q5VTT5 1437 aa29.6■■■□□ 2.33
LTBP4-223ENST00000598717 GPATCH8Q9UKJ3 1502 aaKnown RBP29.6■■■□□ 2.33
LTBP4-223ENST00000598717 CD109Q6YHK3 1445 aa29.57■■■□□ 2.32
LTBP4-223ENST00000598717 CFDP1Q9UEE9 299 aaPredicted RBP29.57■■■□□ 2.32
LTBP4-223ENST00000598717 TRHP20396 242 aaPredicted RBP29.56■■■□□ 2.32
LTBP4-223ENST00000598717 PLCH2O75038 1416 aa29.55■■■□□ 2.32
LTBP4-223ENST00000598717 ITSN2Q9NZM3 1697 aa29.55■■■□□ 2.32
LTBP4-223ENST00000598717 MYO5CQ9NQX4 1742 aa29.54■■■□□ 2.32
LTBP4-223ENST00000598717 CDC42BPAQ5VT25 1732 aa29.52■■■□□ 2.32
LTBP4-223ENST00000598717 MIA2Q96PC5 1412 aa29.52■■■□□ 2.32
LTBP4-223ENST00000598717 FGD6Q6ZV73 1430 aa29.51■■■□□ 2.31
LTBP4-223ENST00000598717 ARHGAP5Q13017 1502 aa29.5■■■□□ 2.31
LTBP4-223ENST00000598717 PREX2Q70Z35 1606 aa29.5■■■□□ 2.31
LTBP4-223ENST00000598717 ZNF777Q9ULD5 760 aaPredicted RBP29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms