RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 PRG4Q92954 1404 aaPredicted RBP39.55■■■■□ 3.92
SSBP4-205ENST00000598159 CARMIL1Q5VZK9 1371 aa39.5■■■■□ 3.91
SSBP4-205ENST00000598159 RUSC2Q8N2Y8 1516 aa39.48■■■■□ 3.91
SSBP4-205ENST00000598159 KIAA0586Q9BVV6 1533 aa39.45■■■■□ 3.91
SSBP4-205ENST00000598159 RAPGEF2Q9Y4G8 1499 aa39.17■■■■□ 3.86
SSBP4-205ENST00000598159 NPM1P06748 294 aaKnown RBP eCLIP39.12■■■■□ 3.85
SSBP4-205ENST00000598159 IQGAP2Q13576 1575 aa39.08■■■■□ 3.85
SSBP4-205ENST00000598159 CARMIL2Q6F5E8 1435 aa39.07■■■■□ 3.85
SSBP4-205ENST00000598159 PTPRGP23470 1445 aa39.03■■■■□ 3.84
SSBP4-205ENST00000598159 TNIKQ9UKE5 1360 aa38.99■■■■□ 3.83
SSBP4-205ENST00000598159 ADCY10Q96PN6 1610 aa38.96■■■■□ 3.83
SSBP4-205ENST00000598159 TTBK1Q5TCY1 1321 aaPredicted RBP38.9■■■■□ 3.82
SSBP4-205ENST00000598159 MAPKBP1O60336 1514 aa38.87■■■■□ 3.81
SSBP4-205ENST00000598159 UGGT2Q9NYU1 1516 aa38.87■■■■□ 3.81
SSBP4-205ENST00000598159 DISP1Q96F81 1524 aa38.86■■■■□ 3.81
SSBP4-205ENST00000598159 PRXQ9BXM0 1461 aa38.85■■■■□ 3.81
SSBP4-205ENST00000598159 KIF13AQ9H1H9 1805 aa38.84■■■■□ 3.81
SSBP4-205ENST00000598159 FAM69CQ0P6D2 419 aa38.82■■■■□ 3.8
SSBP4-205ENST00000598159 ABCC10Q5T3U5 1492 aa38.81■■■■□ 3.8
SSBP4-205ENST00000598159 CSRNP3Q8WYN3 585 aa38.76■■■■□ 3.8
SSBP4-205ENST00000598159 CTTNBP2Q8WZ74 1663 aa38.74■■■■□ 3.79
SSBP4-205ENST00000598159 UACAQ9BZF9 1416 aa38.72■■■■□ 3.79
SSBP4-205ENST00000598159 UHRF1BP1LA0JNW5 1464 aa38.71■■■■□ 3.79
SSBP4-205ENST00000598159 ABCC2Q92887 1545 aa38.7■■■■□ 3.79
SSBP4-205ENST00000598159 KIAA0556O60303 1618 aa38.69■■■■□ 3.78
SSBP4-205ENST00000598159 DIP2BQ9P265 1576 aa38.65■■■■□ 3.78
SSBP4-205ENST00000598159 GOLGA3Q08378 1498 aa38.64■■■■□ 3.78
SSBP4-205ENST00000598159 EEA1Q15075 1411 aa38.63■■■■□ 3.78
SSBP4-205ENST00000598159 PLB1Q6P1J6 1458 aa38.54■■■■□ 3.76
SSBP4-205ENST00000598159 ASXL2Q76L83 1435 aa38.53■■■■□ 3.76
SSBP4-205ENST00000598159 KDM5BQ9UGL1 1544 aa38.52■■■■□ 3.76
SSBP4-205ENST00000598159 FAM9AQ8IZU1 332 aaPredicted RBP38.46■■■■□ 3.75
SSBP4-205ENST00000598159 CHIC1Q5VXU3 224 aa38.4■■■■□ 3.74
SSBP4-205ENST00000598159 TSPOAP1O95153 1857 aa38.4■■■■□ 3.74
SSBP4-205ENST00000598159 ZCCHC11Q5TAX3 1644 aaKnown RBP38.38■■■■□ 3.74
SSBP4-205ENST00000598159 GLI2P10070 1586 aa38.38■■■■□ 3.73
SSBP4-205ENST00000598159 P3H3Q8IVL6 736 aa38.35■■■■□ 3.73
SSBP4-205ENST00000598159 ABCA8O94911 1581 aa38.34■■■■□ 3.73
SSBP4-205ENST00000598159 EPRSP07814 1512 aaKnown RBP38.29■■■■□ 3.72
SSBP4-205ENST00000598159 KDM6BO15054 1643 aa38.23■■■■□ 3.71
SSBP4-205ENST00000598159 SAMD9Q5K651 1589 aa38.22■■■■□ 3.71
SSBP4-205ENST00000598159 WDR7Q9Y4E6 1490 aa38.22■■■■□ 3.71
SSBP4-205ENST00000598159 KIF21BO75037 1637 aa38.21■■■■□ 3.71
SSBP4-205ENST00000598159 AEBP2Q6ZN18 517 aaPredicted RBP38.21■■■■□ 3.71
SSBP4-205ENST00000598159 RANGAP1P46060 587 aaPredicted RBP38.16■■■■□ 3.7
SSBP4-205ENST00000598159 PPRC1Q5VV67 1664 aaKnown RBP38.15■■■■□ 3.7
SSBP4-205ENST00000598159 MAP3K4Q9Y6R4 1608 aa38.14■■■■□ 3.7
SSBP4-205ENST00000598159 KCNH8Q96L42 1107 aa38.12■■■■□ 3.69
SSBP4-205ENST00000598159 ATP10BO94823 1461 aa38.07■■■■□ 3.68
SSBP4-205ENST00000598159 TEX14Q8IWB6 1497 aa38.07■■■■□ 3.68
SSBP4-205ENST00000598159 ARID3CA6NKF2 412 aa38.04■■■■□ 3.68
SSBP4-205ENST00000598159 UBTFP17480 764 aaKnown RBP38.04■■■■□ 3.68
SSBP4-205ENST00000598159 RAPGEF6Q8TEU7 1601 aa38.01■■■■□ 3.67
SSBP4-205ENST00000598159 FHOD3Q2V2M9 1422 aa37.99■■■■□ 3.67
SSBP4-205ENST00000598159 CD109Q6YHK3 1445 aa37.99■■■■□ 3.67
SSBP4-205ENST00000598159 EFCAB5A4FU69 1503 aa37.97■■■■□ 3.67
SSBP4-205ENST00000598159 EHMT2Q96KQ7 1210 aa37.96■■■■□ 3.67
SSBP4-205ENST00000598159 CFAP43Q8NDM7 1665 aa37.95■■■■□ 3.67
SSBP4-205ENST00000598159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.93■■■■□ 3.66
SSBP4-205ENST00000598159 HNRNPUL2Q1KMD3 747 aaKnown RBP37.93■■■■□ 3.66
SSBP4-205ENST00000598159 MAGI3Q5TCQ9 1506 aa37.92■■■■□ 3.66
SSBP4-205ENST00000598159 COL17A1Q9UMD9 1497 aaPredicted RBP37.9■■■■□ 3.66
SSBP4-205ENST00000598159 NUP153P49790 1475 aaKnown RBP37.87■■■■□ 3.65
SSBP4-205ENST00000598159 PLEKHD1A6NEE1 506 aa37.79■■■■□ 3.64
SSBP4-205ENST00000598159 ABCA9Q8IUA7 1624 aa37.74■■■■□ 3.63
SSBP4-205ENST00000598159 KDM4FA0A1W2PPD8 638 aa37.73■■■■□ 3.63
SSBP4-205ENST00000598159 PHLDB1Q86UU1 1377 aa37.68■■■■□ 3.62
SSBP4-205ENST00000598159 ARHGAP35Q9NRY4 1499 aa37.68■■■■□ 3.62
SSBP4-205ENST00000598159 FMN1Q68DA7 1419 aa37.68■■■■□ 3.62
SSBP4-205ENST00000598159 ARAP3Q8WWN8 1544 aa37.62■■■■□ 3.61
SSBP4-205ENST00000598159 ATP1B4Q9UN42 357 aaPredicted RBP37.6■■■■□ 3.61
SSBP4-205ENST00000598159 NEO1Q92859 1461 aa37.54■■■■□ 3.6
SSBP4-205ENST00000598159 CDK13Q14004 1512 aaKnown RBP37.51■■■■□ 3.6
SSBP4-205ENST00000598159 CDK11AQ9UQ88 783 aaPredicted RBP37.5■■■■□ 3.59
SSBP4-205ENST00000598159 HECW1Q76N89 1606 aa37.5■■■■□ 3.59
SSBP4-205ENST00000598159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.46■■■■□ 3.596e-7■■■□□ 16.8
SSBP4-205ENST00000598159 ADGRL1O94910 1474 aa37.45■■■■□ 3.59
SSBP4-205ENST00000598159 RAPGEF3O95398 923 aa37.43■■■■□ 3.58
SSBP4-205ENST00000598159 FANCAO15360 1455 aa37.35■■■■□ 3.57
SSBP4-205ENST00000598159 AKNAQ7Z591 1439 aa37.35■■■■□ 3.57
SSBP4-205ENST00000598159 TTC37Q6PGP7 1564 aa37.34■■■■□ 3.57
SSBP4-205ENST00000598159 CFAP74Q9C0B2 1584 aa37.31■■■■□ 3.56
SSBP4-205ENST00000598159 PLCH2O75038 1416 aa37.29■■■■□ 3.56
SSBP4-205ENST00000598159 CASKIN1Q8WXD9 1431 aa37.29■■■■□ 3.56
SSBP4-205ENST00000598159 DENND4BO75064 1496 aaPredicted RBP37.28■■■■□ 3.56
SSBP4-205ENST00000598159 CLIP1P30622 1438 aa37.27■■■■□ 3.56
SSBP4-205ENST00000598159 TROQ12816 1431 aaPredicted RBP37.27■■■■□ 3.56
SSBP4-205ENST00000598159 LRRIQ1Q96JM4 1722 aa37.23■■■■□ 3.55
SSBP4-205ENST00000598159 FRMPD1Q5SYB0 1578 aa37.22■■■■□ 3.55
SSBP4-205ENST00000598159 EFCAB2Q5VUJ9 269 aa37.21■■■■□ 3.55
SSBP4-205ENST00000598159 CCDC18Q5T9S5 1454 aa37.2■■■■□ 3.55
SSBP4-205ENST00000598159 PCF11O94913 1555 aaKnown RBP37.18■■■■□ 3.54
SSBP4-205ENST00000598159 KIF14Q15058 1648 aa37.18■■■■□ 3.54
SSBP4-205ENST00000598159 RICTORQ6R327 1708 aa37.17■■■■□ 3.54
SSBP4-205ENST00000598159 MYO5CQ9NQX4 1742 aa37.15■■■■□ 3.54
SSBP4-205ENST00000598159 FYCO1Q9BQS8 1478 aa37.13■■■■□ 3.54
SSBP4-205ENST00000598159 SCAPERQ9BY12 1400 aa37.12■■■■□ 3.53
SSBP4-205ENST00000598159 ARID4BQ4LE39 1312 aaPredicted RBP37.07■■■■□ 3.52
SSBP4-205ENST00000598159 MAGI2Q86UL8 1455 aa37.04■■■■□ 3.52
SSBP4-205ENST00000598159 ZMYM4Q5VZL5 1548 aa37.04■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms