RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 SHROOM2Q13796 1616 aa38.5■■■■□ 3.75
IRF3-220ENST00000598108 KIAA0586Q9BVV6 1533 aa38.48■■■■□ 3.75
IRF3-220ENST00000598108 PRG4Q92954 1404 aaPredicted RBP38.46■■■■□ 3.75
IRF3-220ENST00000598108 CHIC1Q5VXU3 224 aa38.46■■■■□ 3.75
IRF3-220ENST00000598108 RAPGEF2Q9Y4G8 1499 aa38.43■■■■□ 3.74
IRF3-220ENST00000598108 PRXQ9BXM0 1461 aa38.3■■■■□ 3.72
IRF3-220ENST00000598108 CSRNP3Q8WYN3 585 aa38.3■■■■□ 3.72
IRF3-220ENST00000598108 FAM9AQ8IZU1 332 aaPredicted RBP38.2■■■■□ 3.71
IRF3-220ENST00000598108 EEA1Q15075 1411 aa38.17■■■■□ 3.7
IRF3-220ENST00000598108 IQGAP2Q13576 1575 aa38.15■■■■□ 3.7
IRF3-220ENST00000598108 CARMIL2Q6F5E8 1435 aa38.04■■■■□ 3.68
IRF3-220ENST00000598108 TRHP20396 242 aaPredicted RBP38.03■■■■□ 3.68
IRF3-220ENST00000598108 TTBK1Q5TCY1 1321 aaPredicted RBP38■■■■□ 3.67
IRF3-220ENST00000598108 PTPRGP23470 1445 aa38■■■■□ 3.67
IRF3-220ENST00000598108 DISP1Q96F81 1524 aa38■■■■□ 3.67
IRF3-220ENST00000598108 UGGT2Q9NYU1 1516 aa38■■■■□ 3.67
IRF3-220ENST00000598108 TNIKQ9UKE5 1360 aa37.98■■■■□ 3.67
IRF3-220ENST00000598108 CTTNBP2Q8WZ74 1663 aa37.87■■■■□ 3.65
IRF3-220ENST00000598108 ADCY10Q96PN6 1610 aa37.81■■■■□ 3.64
IRF3-220ENST00000598108 KIAA0556O60303 1618 aa37.8■■■■□ 3.64
IRF3-220ENST00000598108 NPM1P06748 294 aaKnown RBP eCLIP37.79■■■■□ 3.64
IRF3-220ENST00000598108 EHMT2Q96KQ7 1210 aa37.75■■■■□ 3.63
IRF3-220ENST00000598108 GOLGA3Q08378 1498 aa37.75■■■■□ 3.63
IRF3-220ENST00000598108 KIF21BO75037 1637 aa37.73■■■■□ 3.63
IRF3-220ENST00000598108 UACAQ9BZF9 1416 aa37.7■■■■□ 3.63
IRF3-220ENST00000598108 P3H3Q8IVL6 736 aa37.69■■■■□ 3.62
IRF3-220ENST00000598108 RANGAP1P46060 587 aaPredicted RBP37.66■■■■□ 3.62
IRF3-220ENST00000598108 UHRF1BP1LA0JNW5 1464 aa37.64■■■■□ 3.62
IRF3-220ENST00000598108 UBTFP17480 764 aaKnown RBP37.61■■■■□ 3.61
IRF3-220ENST00000598108 ABCC2Q92887 1545 aa37.61■■■■□ 3.61
IRF3-220ENST00000598108 MAPKBP1O60336 1514 aa37.57■■■■□ 3.61
IRF3-220ENST00000598108 PLB1Q6P1J6 1458 aa37.57■■■■□ 3.6
IRF3-220ENST00000598108 FAM69CQ0P6D2 419 aa37.51■■■■□ 3.6
IRF3-220ENST00000598108 SAMD9Q5K651 1589 aa37.5■■■■□ 3.59
IRF3-220ENST00000598108 ABCC10Q5T3U5 1492 aa37.49■■■■□ 3.59
IRF3-220ENST00000598108 KDM5BQ9UGL1 1544 aa37.46■■■■□ 3.59
IRF3-220ENST00000598108 ABCA8O94911 1581 aa37.44■■■■□ 3.58
IRF3-220ENST00000598108 ASXL2Q76L83 1435 aa37.43■■■■□ 3.58
IRF3-220ENST00000598108 FHOD3Q2V2M9 1422 aa37.4■■■■□ 3.58
IRF3-220ENST00000598108 KIF13AQ9H1H9 1805 aa37.35■■■■□ 3.57
IRF3-220ENST00000598108 DIP2BQ9P265 1576 aa37.34■■■■□ 3.57
IRF3-220ENST00000598108 ARID3CA6NKF2 412 aa37.31■■■■□ 3.56
IRF3-220ENST00000598108 ZCCHC11Q5TAX3 1644 aaKnown RBP37.31■■■■□ 3.56
IRF3-220ENST00000598108 EFCAB5A4FU69 1503 aa37.3■■■■□ 3.56
IRF3-220ENST00000598108 ATP10BO94823 1461 aa37.22■■■■□ 3.55
IRF3-220ENST00000598108 ARHGAP35Q9NRY4 1499 aa37.21■■■■□ 3.55
IRF3-220ENST00000598108 EPRSP07814 1512 aaKnown RBP37.19■■■■□ 3.54
IRF3-220ENST00000598108 WDR7Q9Y4E6 1490 aa37.17■■■■□ 3.54
IRF3-220ENST00000598108 RAPGEF6Q8TEU7 1601 aa37.16■■■■□ 3.54
IRF3-220ENST00000598108 NUP153P49790 1475 aaKnown RBP37.13■■■■□ 3.54
IRF3-220ENST00000598108 KCNH8Q96L42 1107 aa37.13■■■■□ 3.53
IRF3-220ENST00000598108 GLI2P10070 1586 aa37.12■■■■□ 3.53
IRF3-220ENST00000598108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.07■■■■□ 3.52
IRF3-220ENST00000598108 HNRNPUL2Q1KMD3 747 aaKnown RBP37.07■■■■□ 3.52
IRF3-220ENST00000598108 FMN1Q68DA7 1419 aa37.02■■■■□ 3.52
IRF3-220ENST00000598108 TSPOAP1O95153 1857 aa36.99■■■■□ 3.51
IRF3-220ENST00000598108 ATP1B4Q9UN42 357 aaPredicted RBP36.96■■■■□ 3.51
IRF3-220ENST00000598108 LOC105371045A0A1W2PR82 267 aa36.95■■■■□ 3.51
IRF3-220ENST00000598108 CLIP1P30622 1438 aa36.94■■■■□ 3.5
IRF3-220ENST00000598108 MAP3K4Q9Y6R4 1608 aa36.92■■■■□ 3.5
IRF3-220ENST00000598108 PLEKHD1A6NEE1 506 aa36.9■■■■□ 3.5
IRF3-220ENST00000598108 CD109Q6YHK3 1445 aa36.9■■■■□ 3.5
IRF3-220ENST00000598108 PPRC1Q5VV67 1664 aaKnown RBP36.9■■■■□ 3.5
IRF3-220ENST00000598108 CDK13Q14004 1512 aaKnown RBP36.85■■■■□ 3.49
IRF3-220ENST00000598108 TEX14Q8IWB6 1497 aa36.79■■■■□ 3.48
IRF3-220ENST00000598108 MAGI3Q5TCQ9 1506 aa36.78■■■■□ 3.48
IRF3-220ENST00000598108 KDM6BO15054 1643 aa36.76■■■■□ 3.48
IRF3-220ENST00000598108 HECW1Q76N89 1606 aa36.76■■■■□ 3.48
IRF3-220ENST00000598108 COL17A1Q9UMD9 1497 aaPredicted RBP36.75■■■■□ 3.47
IRF3-220ENST00000598108 CEP162Q5TB80 1403 aa36.75■■■■□ 3.47
IRF3-220ENST00000598108 CASKIN1Q8WXD9 1431 aa36.75■■■■□ 3.47
IRF3-220ENST00000598108 CFAP43Q8NDM7 1665 aa36.74■■■■□ 3.47
IRF3-220ENST00000598108 ABCA9Q8IUA7 1624 aa36.7■■■■□ 3.47
IRF3-220ENST00000598108 PCF11O94913 1555 aaKnown RBP36.67■■■■□ 3.46
IRF3-220ENST00000598108 CDK11AQ9UQ88 783 aaPredicted RBP36.67■■■■□ 3.46
IRF3-220ENST00000598108 FYCO1Q9BQS8 1478 aa36.59■■■■□ 3.45
IRF3-220ENST00000598108 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.59■■■■□ 3.453e-7■□□□□ 11.1
IRF3-220ENST00000598108 LRRIQ1Q96JM4 1722 aa36.56■■■■□ 3.44
IRF3-220ENST00000598108 TROQ12816 1431 aaPredicted RBP36.55■■■■□ 3.44
IRF3-220ENST00000598108 CCDC18Q5T9S5 1454 aa36.53■■■■□ 3.44
IRF3-220ENST00000598108 TTC37Q6PGP7 1564 aa36.49■■■■□ 3.43
IRF3-220ENST00000598108 PHLDB1Q86UU1 1377 aa36.49■■■■□ 3.43
IRF3-220ENST00000598108 ARAP3Q8WWN8 1544 aa36.47■■■■□ 3.43
IRF3-220ENST00000598108 NEO1Q92859 1461 aa36.46■■■■□ 3.43
IRF3-220ENST00000598108 PLCH2O75038 1416 aa36.42■■■■□ 3.42
IRF3-220ENST00000598108 KIF14Q15058 1648 aa36.42■■■■□ 3.42
IRF3-220ENST00000598108 RAPGEF3O95398 923 aa36.41■■■■□ 3.42
IRF3-220ENST00000598108 FANCAO15360 1455 aa36.4■■■■□ 3.42
IRF3-220ENST00000598108 AKNAQ7Z591 1439 aa36.37■■■■□ 3.41
IRF3-220ENST00000598108 EFCAB2Q5VUJ9 269 aa36.31■■■■□ 3.4
IRF3-220ENST00000598108 VPS8Q8N3P4 1428 aa36.29■■■■□ 3.4
IRF3-220ENST00000598108 DENND4BO75064 1496 aaPredicted RBP36.24■■■■□ 3.39
IRF3-220ENST00000598108 MTUS2Q5JR59 1369 aa36.24■■■■□ 3.39
IRF3-220ENST00000598108 KDM4FA0A1W2PPD8 638 aa36.22■■■■□ 3.39
IRF3-220ENST00000598108 CFAP74Q9C0B2 1584 aa36.2■■■■□ 3.39
IRF3-220ENST00000598108 SCAPERQ9BY12 1400 aa36.2■■■■□ 3.39
IRF3-220ENST00000598108 FRMPD1Q5SYB0 1578 aa36.19■■■■□ 3.38
IRF3-220ENST00000598108 MYO5CQ9NQX4 1742 aa36.19■■■■□ 3.38
IRF3-220ENST00000598108 ADGRL1O94910 1474 aa36.18■■■■□ 3.38
IRF3-220ENST00000598108 ARHGAP5Q13017 1502 aa36.18■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms