RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 FAM69CQ0P6D2 419 aa29.21■■■□□ 2.27
SHKBP1-215ENST00000597649 RUSC2Q8N2Y8 1516 aa29.2■■■□□ 2.27
SHKBP1-215ENST00000597649 IGF1RP08069 1367 aa29.17■■■□□ 2.26
SHKBP1-215ENST00000597649 NPM1P06748 294 aaKnown RBP eCLIP29.16■■■□□ 2.26
SHKBP1-215ENST00000597649 ABCC10Q5T3U5 1492 aa29.16■■■□□ 2.26
SHKBP1-215ENST00000597649 KIAA0586Q9BVV6 1533 aa29.1■■■□□ 2.25
SHKBP1-215ENST00000597649 ADCY10Q96PN6 1610 aa29.08■■■□□ 2.25
SHKBP1-215ENST00000597649 MAPKBP1O60336 1514 aa29.07■■■□□ 2.24
SHKBP1-215ENST00000597649 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
SHKBP1-215ENST00000597649 DIP2BQ9P265 1576 aa29.01■■■□□ 2.24
SHKBP1-215ENST00000597649 PTPRGP23470 1445 aa28.93■■■□□ 2.22
SHKBP1-215ENST00000597649 CUL7Q14999 1698 aa28.93■■■□□ 2.22
SHKBP1-215ENST00000597649 CARMIL1Q5VZK9 1371 aa28.92■■■□□ 2.22
SHKBP1-215ENST00000597649 TTBK1Q5TCY1 1321 aaPredicted RBP28.92■■■□□ 2.22
SHKBP1-215ENST00000597649 KDM4FA0A1W2PPD8 638 aa28.89■■■□□ 2.22
SHKBP1-215ENST00000597649 TNIKQ9UKE5 1360 aa28.83■■■□□ 2.21
SHKBP1-215ENST00000597649 KDM6BO15054 1643 aa28.82■■■□□ 2.2
SHKBP1-215ENST00000597649 TSPOAP1O95153 1857 aa28.81■■■□□ 2.2
SHKBP1-215ENST00000597649 CARMIL2Q6F5E8 1435 aa28.78■■■□□ 2.2
SHKBP1-215ENST00000597649 ABCC2Q92887 1545 aa28.77■■■□□ 2.2
SHKBP1-215ENST00000597649 ASXL2Q76L83 1435 aa28.74■■■□□ 2.19
SHKBP1-215ENST00000597649 IQGAP2Q13576 1575 aa28.7■■■□□ 2.18
SHKBP1-215ENST00000597649 DISP1Q96F81 1524 aa28.69■■■□□ 2.18
SHKBP1-215ENST00000597649 PLB1Q6P1J6 1458 aa28.69■■■□□ 2.18
SHKBP1-215ENST00000597649 UHRF1BP1LA0JNW5 1464 aa28.68■■■□□ 2.18
SHKBP1-215ENST00000597649 UACAQ9BZF9 1416 aa28.68■■■□□ 2.18
SHKBP1-215ENST00000597649 GLI2P10070 1586 aa28.64■■■□□ 2.18
SHKBP1-215ENST00000597649 PPRC1Q5VV67 1664 aaKnown RBP28.61■■■□□ 2.17
SHKBP1-215ENST00000597649 COL17A1Q9UMD9 1497 aaPredicted RBP28.59■■■□□ 2.17
SHKBP1-215ENST00000597649 RAPGEF2Q9Y4G8 1499 aa28.57■■■□□ 2.16
SHKBP1-215ENST00000597649 KDM5BQ9UGL1 1544 aa28.57■■■□□ 2.16
SHKBP1-215ENST00000597649 EPRSP07814 1512 aaKnown RBP28.56■■■□□ 2.16
SHKBP1-215ENST00000597649 UGGT2Q9NYU1 1516 aa28.55■■■□□ 2.16
SHKBP1-215ENST00000597649 KIAA0556O60303 1618 aa28.45■■■□□ 2.14
SHKBP1-215ENST00000597649 ADGRL1O94910 1474 aa28.45■■■□□ 2.14
SHKBP1-215ENST00000597649 ZCCHC11Q5TAX3 1644 aaKnown RBP28.44■■■□□ 2.14
SHKBP1-215ENST00000597649 MAP3K4Q9Y6R4 1608 aa28.44■■■□□ 2.14
SHKBP1-215ENST00000597649 TEX14Q8IWB6 1497 aa28.39■■■□□ 2.13
SHKBP1-215ENST00000597649 WDR7Q9Y4E6 1490 aa28.36■■■□□ 2.13
SHKBP1-215ENST00000597649 ILDR1Q86SU0 546 aaPredicted RBP28.33■■■□□ 2.13
SHKBP1-215ENST00000597649 KCNH8Q96L42 1107 aa28.32■■■□□ 2.12
SHKBP1-215ENST00000597649 CD109Q6YHK3 1445 aa28.27■■■□□ 2.12
SHKBP1-215ENST00000597649 ABCA8O94911 1581 aa28.26■■■□□ 2.11
SHKBP1-215ENST00000597649 GOLGA3Q08378 1498 aa28.25■■■□□ 2.11
SHKBP1-215ENST00000597649 MAGI3Q5TCQ9 1506 aa28.23■■■□□ 2.11
SHKBP1-215ENST00000597649 PRXQ9BXM0 1461 aa28.23■■■□□ 2.11
SHKBP1-215ENST00000597649 CTTNBP2Q8WZ74 1663 aa28.21■■■□□ 2.11
SHKBP1-215ENST00000597649 ARID3CA6NKF2 412 aa28.15■■■□□ 2.1
SHKBP1-215ENST00000597649 P3H3Q8IVL6 736 aa28.15■■■□□ 2.1
SHKBP1-215ENST00000597649 HECW2Q9P2P5 1572 aa28.14■■■□□ 2.1
SHKBP1-215ENST00000597649 CFAP43Q8NDM7 1665 aa28.13■■■□□ 2.09
SHKBP1-215ENST00000597649 ATP10BO94823 1461 aa28.09■■■□□ 2.09
SHKBP1-215ENST00000597649 ARAP3Q8WWN8 1544 aa28.02■■■□□ 2.08
SHKBP1-215ENST00000597649 FAM9AQ8IZU1 332 aaPredicted RBP27.98■■■□□ 2.07
SHKBP1-215ENST00000597649 CSRNP3Q8WYN3 585 aa27.97■■■□□ 2.07
SHKBP1-215ENST00000597649 KIF21BO75037 1637 aa27.96■■■□□ 2.07
SHKBP1-215ENST00000597649 RAPGEF3O95398 923 aa27.95■■■□□ 2.06
SHKBP1-215ENST00000597649 PHLDB1Q86UU1 1377 aa27.91■■■□□ 2.06
SHKBP1-215ENST00000597649 ABCA9Q8IUA7 1624 aa27.91■■■□□ 2.06
SHKBP1-215ENST00000597649 SAMD9Q5K651 1589 aa27.89■■■□□ 2.05
SHKBP1-215ENST00000597649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.87■■■□□ 2.05
SHKBP1-215ENST00000597649 HNRNPUL2Q1KMD3 747 aaKnown RBP27.87■■■□□ 2.05
SHKBP1-215ENST00000597649 RANGAP1P46060 587 aaPredicted RBP27.84■■■□□ 2.05
SHKBP1-215ENST00000597649 RAPGEF6Q8TEU7 1601 aa27.84■■■□□ 2.05
SHKBP1-215ENST00000597649 NEO1Q92859 1461 aa27.83■■■□□ 2.04
SHKBP1-215ENST00000597649 PTPRMP28827 1452 aa27.82■■■□□ 2.04
SHKBP1-215ENST00000597649 NUP153P49790 1475 aaKnown RBP27.82■■■□□ 2.04
SHKBP1-215ENST00000597649 ADAMTSL3P82987 1691 aa27.79■■■□□ 2.04
SHKBP1-215ENST00000597649 FHOD3Q2V2M9 1422 aa27.77■■■□□ 2.04
SHKBP1-215ENST00000597649 FRMPD1Q5SYB0 1578 aa27.76■■■□□ 2.03
SHKBP1-215ENST00000597649 ARID4BQ4LE39 1312 aaPredicted RBP27.73■■■□□ 2.03
SHKBP1-215ENST00000597649 PLEKHD1A6NEE1 506 aa27.73■■■□□ 2.03
SHKBP1-215ENST00000597649 FBXO41Q8TF61 875 aa27.67■■■□□ 2.02
SHKBP1-215ENST00000597649 BCORL1Q5H9F3 1711 aa27.67■■■□□ 2.02
SHKBP1-215ENST00000597649 AKNAQ7Z591 1439 aa27.67■■■□□ 2.02
SHKBP1-215ENST00000597649 EEA1Q15075 1411 aa27.66■■■□□ 2.02
SHKBP1-215ENST00000597649 DENND4BO75064 1496 aaPredicted RBP27.65■■■□□ 2.02
SHKBP1-215ENST00000597649 MADDQ8WXG6 1647 aa27.64■■■□□ 2.02
SHKBP1-215ENST00000597649 FANCAO15360 1455 aa27.61■■■□□ 2.01
SHKBP1-215ENST00000597649 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.61■■■□□ 2.01
SHKBP1-215ENST00000597649 LMTK3Q96Q04 1460 aa27.58■■■□□ 2.01
SHKBP1-215ENST00000597649 RICTORQ6R327 1708 aa27.58■■■□□ 2.01
SHKBP1-215ENST00000597649 ARHGEF40Q8TER5 1519 aa27.57■■■□□ 2
SHKBP1-215ENST00000597649 PCF11O94913 1555 aaKnown RBP27.56■■■□□ 2
SHKBP1-215ENST00000597649 YEATS2Q9ULM3 1422 aa27.54■■■□□ 2
SHKBP1-215ENST00000597649 TTC37Q6PGP7 1564 aa27.53■■■□□ 2
SHKBP1-215ENST00000597649 HSPA2P54652 639 aa27.51■■□□□ 1.99
SHKBP1-215ENST00000597649 PLPPR3Q6T4P5 718 aa27.51■■□□□ 1.99
SHKBP1-215ENST00000597649 EFCAB5A4FU69 1503 aa27.51■■□□□ 1.99
SHKBP1-215ENST00000597649 CDK13Q14004 1512 aaKnown RBP27.51■■□□□ 1.99
SHKBP1-215ENST00000597649 RIMS1Q86UR5 1692 aaKnown RBP27.5■■□□□ 1.99
SHKBP1-215ENST00000597649 ZMYM4Q5VZL5 1548 aa27.48■■□□□ 1.99
SHKBP1-215ENST00000597649 SIGLEC1Q9BZZ2 1709 aa27.48■■□□□ 1.99
SHKBP1-215ENST00000597649 CFAP74Q9C0B2 1584 aa27.47■■□□□ 1.99
SHKBP1-215ENST00000597649 MLECQ14165 292 aa27.46■■□□□ 1.99
SHKBP1-215ENST00000597649 EHMT2Q96KQ7 1210 aa27.46■■□□□ 1.99
SHKBP1-215ENST00000597649 PLCH2O75038 1416 aa27.46■■□□□ 1.99
SHKBP1-215ENST00000597649 POGZQ7Z3K3 1410 aa27.45■■□□□ 1.98
SHKBP1-215ENST00000597649 SCAPERQ9BY12 1400 aa27.45■■□□□ 1.98
SHKBP1-215ENST00000597649 ZFYVE16Q7Z3T8 1539 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms