RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 CUL7Q14999 1698 aa26.46■■□□□ 1.83
TGFB1-202ENST00000597453 JPH4Q96JJ6 628 aa26.45■■□□□ 1.82
TGFB1-202ENST00000597453 KIAA0586Q9BVV6 1533 aa26.34■■□□□ 1.81
TGFB1-202ENST00000597453 CARMIL1Q5VZK9 1371 aa26.28■■□□□ 1.8
TGFB1-202ENST00000597453 KIF13AQ9H1H9 1805 aa26.26■■□□□ 1.79
TGFB1-202ENST00000597453 ADCY10Q96PN6 1610 aa26.22■■□□□ 1.79
TGFB1-202ENST00000597453 IQGAP2Q13576 1575 aa26.14■■□□□ 1.78
TGFB1-202ENST00000597453 MAPKBP1O60336 1514 aa26.14■■□□□ 1.77
TGFB1-202ENST00000597453 NPM1P06748 294 aaKnown RBP eCLIP26.1■■□□□ 1.77
TGFB1-202ENST00000597453 ABCC10Q5T3U5 1492 aa26.09■■□□□ 1.77
TGFB1-202ENST00000597453 DIP2BQ9P265 1576 aa26.07■■□□□ 1.76
TGFB1-202ENST00000597453 PTPRGP23470 1445 aa26.07■■□□□ 1.76
TGFB1-202ENST00000597453 RAPGEF2Q9Y4G8 1499 aa26.07■■□□□ 1.76
TGFB1-202ENST00000597453 CARMIL2Q6F5E8 1435 aa26.05■■□□□ 1.76
TGFB1-202ENST00000597453 TNIKQ9UKE5 1360 aa26.04■■□□□ 1.76
TGFB1-202ENST00000597453 FAM69CQ0P6D2 419 aa26.03■■□□□ 1.76
TGFB1-202ENST00000597453 TTBK1Q5TCY1 1321 aaPredicted RBP26.03■■□□□ 1.76
TGFB1-202ENST00000597453 DISP1Q96F81 1524 aa26.02■■□□□ 1.76
TGFB1-202ENST00000597453 UGGT2Q9NYU1 1516 aa25.98■■□□□ 1.75
TGFB1-202ENST00000597453 ABCC2Q92887 1545 aa25.94■■□□□ 1.74
TGFB1-202ENST00000597453 CTTNBP2Q8WZ74 1663 aa25.93■■□□□ 1.74
TGFB1-202ENST00000597453 KIAA0556O60303 1618 aa25.92■■□□□ 1.74
TGFB1-202ENST00000597453 TSPOAP1O95153 1857 aa25.91■■□□□ 1.74
TGFB1-202ENST00000597453 UHRF1BP1LA0JNW5 1464 aa25.91■■□□□ 1.74
TGFB1-202ENST00000597453 UACAQ9BZF9 1416 aa25.88■■□□□ 1.73
TGFB1-202ENST00000597453 PRXQ9BXM0 1461 aa25.85■■□□□ 1.73
TGFB1-202ENST00000597453 ASXL2Q76L83 1435 aa25.84■■□□□ 1.73
TGFB1-202ENST00000597453 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
TGFB1-202ENST00000597453 PLB1Q6P1J6 1458 aa25.8■■□□□ 1.72
TGFB1-202ENST00000597453 KDM6BO15054 1643 aa25.8■■□□□ 1.72
TGFB1-202ENST00000597453 KDM5BQ9UGL1 1544 aa25.79■■□□□ 1.72
TGFB1-202ENST00000597453 ZCCHC11Q5TAX3 1644 aaKnown RBP25.78■■□□□ 1.72
TGFB1-202ENST00000597453 GLI2P10070 1586 aa25.78■■□□□ 1.72
TGFB1-202ENST00000597453 PPRC1Q5VV67 1664 aaKnown RBP25.76■■□□□ 1.71
TGFB1-202ENST00000597453 GOLGA3Q08378 1498 aa25.73■■□□□ 1.71
TGFB1-202ENST00000597453 EPRSP07814 1512 aaKnown RBP25.7■■□□□ 1.7
TGFB1-202ENST00000597453 ABCA8O94911 1581 aa25.67■■□□□ 1.7
TGFB1-202ENST00000597453 MAP3K4Q9Y6R4 1608 aa25.66■■□□□ 1.7
TGFB1-202ENST00000597453 CSRNP3Q8WYN3 585 aa25.63■■□□□ 1.69
TGFB1-202ENST00000597453 WDR7Q9Y4E6 1490 aa25.61■■□□□ 1.69
TGFB1-202ENST00000597453 SAMD9Q5K651 1589 aa25.56■■□□□ 1.68
TGFB1-202ENST00000597453 EEA1Q15075 1411 aa25.54■■□□□ 1.68
TGFB1-202ENST00000597453 P3H3Q8IVL6 736 aa25.54■■□□□ 1.68
TGFB1-202ENST00000597453 COL17A1Q9UMD9 1497 aaPredicted RBP25.53■■□□□ 1.68
TGFB1-202ENST00000597453 TEX14Q8IWB6 1497 aa25.52■■□□□ 1.68
TGFB1-202ENST00000597453 CFAP43Q8NDM7 1665 aa25.48■■□□□ 1.67
TGFB1-202ENST00000597453 KDM4FA0A1W2PPD8 638 aa25.46■■□□□ 1.67
TGFB1-202ENST00000597453 FAM9AQ8IZU1 332 aaPredicted RBP25.46■■□□□ 1.67
TGFB1-202ENST00000597453 KCNH8Q96L42 1107 aa25.45■■□□□ 1.66
TGFB1-202ENST00000597453 ARID3CA6NKF2 412 aa25.44■■□□□ 1.66
TGFB1-202ENST00000597453 ATP10BO94823 1461 aa25.43■■□□□ 1.66
TGFB1-202ENST00000597453 RAPGEF6Q8TEU7 1601 aa25.42■■□□□ 1.66
TGFB1-202ENST00000597453 CD109Q6YHK3 1445 aa25.42■■□□□ 1.66
TGFB1-202ENST00000597453 MAGI3Q5TCQ9 1506 aa25.42■■□□□ 1.66
TGFB1-202ENST00000597453 KIF21BO75037 1637 aa25.41■■□□□ 1.66
TGFB1-202ENST00000597453 RANGAP1P46060 587 aaPredicted RBP25.38■■□□□ 1.65
TGFB1-202ENST00000597453 FHOD3Q2V2M9 1422 aa25.36■■□□□ 1.65
TGFB1-202ENST00000597453 ADGRL1O94910 1474 aa25.32■■□□□ 1.64
TGFB1-202ENST00000597453 NUP153P49790 1475 aaKnown RBP25.32■■□□□ 1.64
TGFB1-202ENST00000597453 ABCA9Q8IUA7 1624 aa25.31■■□□□ 1.64
TGFB1-202ENST00000597453 EFCAB5A4FU69 1503 aa25.28■■□□□ 1.64
TGFB1-202ENST00000597453 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
TGFB1-202ENST00000597453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.23■■□□□ 1.63
TGFB1-202ENST00000597453 HNRNPUL2Q1KMD3 747 aaKnown RBP25.23■■□□□ 1.63
TGFB1-202ENST00000597453 ARAP3Q8WWN8 1544 aa25.22■■□□□ 1.63
TGFB1-202ENST00000597453 EHMT2Q96KQ7 1210 aa25.2■■□□□ 1.62
TGFB1-202ENST00000597453 UBTFP17480 764 aaKnown RBP25.13■■□□□ 1.61
TGFB1-202ENST00000597453 NEO1Q92859 1461 aa25.12■■□□□ 1.61
TGFB1-202ENST00000597453 PHLDB1Q86UU1 1377 aa25.11■■□□□ 1.61
TGFB1-202ENST00000597453 PLEKHD1A6NEE1 506 aa25.1■■□□□ 1.61
TGFB1-202ENST00000597453 CDK13Q14004 1512 aaKnown RBP25.1■■□□□ 1.61
TGFB1-202ENST00000597453 ARHGAP35Q9NRY4 1499 aa25.09■■□□□ 1.61
TGFB1-202ENST00000597453 FRMPD1Q5SYB0 1578 aa25.08■■□□□ 1.61
TGFB1-202ENST00000597453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.07■■□□□ 1.6
TGFB1-202ENST00000597453 TTC37Q6PGP7 1564 aa25.06■■□□□ 1.6
TGFB1-202ENST00000597453 RAPGEF3O95398 923 aa25.06■■□□□ 1.6
TGFB1-202ENST00000597453 HECW1Q76N89 1606 aa25.03■■□□□ 1.6
TGFB1-202ENST00000597453 FMN1Q68DA7 1419 aa25.02■■□□□ 1.6
TGFB1-202ENST00000597453 RICTORQ6R327 1708 aa24.99■■□□□ 1.59
TGFB1-202ENST00000597453 CFAP74Q9C0B2 1584 aa24.99■■□□□ 1.59
TGFB1-202ENST00000597453 FANCAO15360 1455 aa24.98■■□□□ 1.59
TGFB1-202ENST00000597453 AKNAQ7Z591 1439 aa24.96■■□□□ 1.59
TGFB1-202ENST00000597453 LRRIQ1Q96JM4 1722 aa24.95■■□□□ 1.59
TGFB1-202ENST00000597453 ATP1B4Q9UN42 357 aaPredicted RBP24.95■■□□□ 1.58
TGFB1-202ENST00000597453 HECW2Q9P2P5 1572 aa24.95■■□□□ 1.58
TGFB1-202ENST00000597453 DENND4BO75064 1496 aaPredicted RBP24.94■■□□□ 1.58
TGFB1-202ENST00000597453 ADAMTSL3P82987 1691 aa24.92■■□□□ 1.58
TGFB1-202ENST00000597453 ARHGEF40Q8TER5 1519 aa24.91■■□□□ 1.58
TGFB1-202ENST00000597453 KIF14Q15058 1648 aa24.9■■□□□ 1.58
TGFB1-202ENST00000597453 BCORL1Q5H9F3 1711 aa24.88■■□□□ 1.57
TGFB1-202ENST00000597453 MYO5CQ9NQX4 1742 aa24.88■■□□□ 1.57
TGFB1-202ENST00000597453 PLCH2O75038 1416 aa24.87■■□□□ 1.57
TGFB1-202ENST00000597453 ZMYM4Q5VZL5 1548 aa24.86■■□□□ 1.57
TGFB1-202ENST00000597453 PCF11O94913 1555 aaKnown RBP24.84■■□□□ 1.57
TGFB1-202ENST00000597453 TROQ12816 1431 aaPredicted RBP24.83■■□□□ 1.57
TGFB1-202ENST00000597453 MADDQ8WXG6 1647 aa24.83■■□□□ 1.56
TGFB1-202ENST00000597453 CDK11AQ9UQ88 783 aaPredicted RBP24.82■■□□□ 1.56
TGFB1-202ENST00000597453 PTPRMP28827 1452 aa24.82■■□□□ 1.56
TGFB1-202ENST00000597453 ARID4BQ4LE39 1312 aaPredicted RBP24.81■■□□□ 1.56
TGFB1-202ENST00000597453 ZFYVE16Q7Z3T8 1539 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms