RNA–Protein interactions for RNA: ENST00000596756.5

IRF3-212, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-212ENST00000596756 KIF27Q86VH2 1401 aa23.83■■□□□ 1.4
IRF3-212ENST00000596756 KIF13AQ9H1H9 1805 aa23.82■■□□□ 1.4
IRF3-212ENST00000596756 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
IRF3-212ENST00000596756 CUL7Q14999 1698 aa23.74■■□□□ 1.39
IRF3-212ENST00000596756 KIAA0586Q9BVV6 1533 aa23.74■■□□□ 1.39
IRF3-212ENST00000596756 ABCC10Q5T3U5 1492 aa23.7■■□□□ 1.38
IRF3-212ENST00000596756 MAPKBP1O60336 1514 aa23.69■■□□□ 1.38
IRF3-212ENST00000596756 ADCY10Q96PN6 1610 aa23.68■■□□□ 1.38
IRF3-212ENST00000596756 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
IRF3-212ENST00000596756 FAM69CQ0P6D2 419 aa23.65■■□□□ 1.38
IRF3-212ENST00000596756 NPM1P06748 294 aaKnown RBP eCLIP23.64■■□□□ 1.37
IRF3-212ENST00000596756 DIP2BQ9P265 1576 aa23.61■■□□□ 1.37
IRF3-212ENST00000596756 PTPRGP23470 1445 aa23.53■■□□□ 1.36
IRF3-212ENST00000596756 IQGAP2Q13576 1575 aa23.49■■□□□ 1.35
IRF3-212ENST00000596756 CARMIL2Q6F5E8 1435 aa23.48■■□□□ 1.35
IRF3-212ENST00000596756 TNIKQ9UKE5 1360 aa23.47■■□□□ 1.35
IRF3-212ENST00000596756 RAPGEF2Q9Y4G8 1499 aa23.43■■□□□ 1.34
IRF3-212ENST00000596756 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
IRF3-212ENST00000596756 DISP1Q96F81 1524 aa23.41■■□□□ 1.34
IRF3-212ENST00000596756 KDM6BO15054 1643 aa23.41■■□□□ 1.34
IRF3-212ENST00000596756 UHRF1BP1LA0JNW5 1464 aa23.4■■□□□ 1.34
IRF3-212ENST00000596756 TSPOAP1O95153 1857 aa23.4■■□□□ 1.34
IRF3-212ENST00000596756 TTBK1Q5TCY1 1321 aaPredicted RBP23.38■■□□□ 1.33
IRF3-212ENST00000596756 KDM4FA0A1W2PPD8 638 aa23.37■■□□□ 1.33
IRF3-212ENST00000596756 UGGT2Q9NYU1 1516 aa23.37■■□□□ 1.33
IRF3-212ENST00000596756 ASXL2Q76L83 1435 aa23.36■■□□□ 1.33
IRF3-212ENST00000596756 GLI2P10070 1586 aa23.35■■□□□ 1.33
IRF3-212ENST00000596756 PLB1Q6P1J6 1458 aa23.35■■□□□ 1.33
IRF3-212ENST00000596756 UACAQ9BZF9 1416 aa23.34■■□□□ 1.33
IRF3-212ENST00000596756 PPRC1Q5VV67 1664 aaKnown RBP23.32■■□□□ 1.32
IRF3-212ENST00000596756 KDM5BQ9UGL1 1544 aa23.3■■□□□ 1.32
IRF3-212ENST00000596756 KIAA0556O60303 1618 aa23.29■■□□□ 1.32
IRF3-212ENST00000596756 PRXQ9BXM0 1461 aa23.24■■□□□ 1.31
IRF3-212ENST00000596756 EPRSP07814 1512 aaKnown RBP23.23■■□□□ 1.31
IRF3-212ENST00000596756 COL17A1Q9UMD9 1497 aaPredicted RBP23.22■■□□□ 1.31
IRF3-212ENST00000596756 CTTNBP2Q8WZ74 1663 aa23.19■■□□□ 1.3
IRF3-212ENST00000596756 ZCCHC11Q5TAX3 1644 aaKnown RBP23.19■■□□□ 1.3
IRF3-212ENST00000596756 MAP3K4Q9Y6R4 1608 aa23.19■■□□□ 1.3
IRF3-212ENST00000596756 GOLGA3Q08378 1498 aa23.15■■□□□ 1.3
IRF3-212ENST00000596756 TEX14Q8IWB6 1497 aa23.09■■□□□ 1.29
IRF3-212ENST00000596756 WDR7Q9Y4E6 1490 aa23.09■■□□□ 1.29
IRF3-212ENST00000596756 ABCA8O94911 1581 aa23.09■■□□□ 1.29
IRF3-212ENST00000596756 ADGRL1O94910 1474 aa23.05■■□□□ 1.28
IRF3-212ENST00000596756 CSRNP3Q8WYN3 585 aa23.02■■□□□ 1.28
IRF3-212ENST00000596756 MAGI3Q5TCQ9 1506 aa23.01■■□□□ 1.27
IRF3-212ENST00000596756 CD109Q6YHK3 1445 aa22.98■■□□□ 1.27
IRF3-212ENST00000596756 CFAP43Q8NDM7 1665 aa22.96■■□□□ 1.27
IRF3-212ENST00000596756 KCNH8Q96L42 1107 aa22.95■■□□□ 1.26
IRF3-212ENST00000596756 EEA1Q15075 1411 aa22.93■■□□□ 1.26
IRF3-212ENST00000596756 P3H3Q8IVL6 736 aa22.93■■□□□ 1.26
IRF3-212ENST00000596756 SAMD9Q5K651 1589 aa22.93■■□□□ 1.26
IRF3-212ENST00000596756 ATP10BO94823 1461 aa22.9■■□□□ 1.26
IRF3-212ENST00000596756 FAM9AQ8IZU1 332 aaPredicted RBP22.87■■□□□ 1.25
IRF3-212ENST00000596756 ARID3CA6NKF2 412 aa22.85■■□□□ 1.25
IRF3-212ENST00000596756 ARAP3Q8WWN8 1544 aa22.84■■□□□ 1.25
IRF3-212ENST00000596756 RAPGEF6Q8TEU7 1601 aa22.81■■□□□ 1.24
IRF3-212ENST00000596756 ILDR1Q86SU0 546 aaPredicted RBP22.79■■□□□ 1.24
IRF3-212ENST00000596756 HECW2Q9P2P5 1572 aa22.79■■□□□ 1.24
IRF3-212ENST00000596756 ABCA9Q8IUA7 1624 aa22.77■■□□□ 1.24
IRF3-212ENST00000596756 NUP153P49790 1475 aaKnown RBP22.77■■□□□ 1.24
IRF3-212ENST00000596756 PHLDB1Q86UU1 1377 aa22.76■■□□□ 1.23
IRF3-212ENST00000596756 FHOD3Q2V2M9 1422 aa22.76■■□□□ 1.23
IRF3-212ENST00000596756 KIF21BO75037 1637 aa22.75■■□□□ 1.23
IRF3-212ENST00000596756 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
IRF3-212ENST00000596756 EFCAB5A4FU69 1503 aa22.7■■□□□ 1.22
IRF3-212ENST00000596756 NEO1Q92859 1461 aa22.69■■□□□ 1.22
IRF3-212ENST00000596756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.68■■□□□ 1.22
IRF3-212ENST00000596756 HNRNPUL2Q1KMD3 747 aaKnown RBP22.68■■□□□ 1.22
IRF3-212ENST00000596756 RAPGEF3O95398 923 aa22.67■■□□□ 1.22
IRF3-212ENST00000596756 ADAMTSL3P82987 1691 aa22.63■■□□□ 1.21
IRF3-212ENST00000596756 FRMPD1Q5SYB0 1578 aa22.62■■□□□ 1.21
IRF3-212ENST00000596756 PLEKHD1A6NEE1 506 aa22.6■■□□□ 1.21
IRF3-212ENST00000596756 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
IRF3-212ENST00000596756 PTPRMP28827 1452 aa22.58■■□□□ 1.2
IRF3-212ENST00000596756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.54■■□□□ 1.23e-7■□□□□ 11.1
IRF3-212ENST00000596756 UBTFP17480 764 aaKnown RBP22.53■■□□□ 1.2
IRF3-212ENST00000596756 BCORL1Q5H9F3 1711 aa22.53■■□□□ 1.2
IRF3-212ENST00000596756 CDK13Q14004 1512 aaKnown RBP22.52■■□□□ 1.2
IRF3-212ENST00000596756 AKNAQ7Z591 1439 aa22.51■■□□□ 1.19
IRF3-212ENST00000596756 EHMT2Q96KQ7 1210 aa22.51■■□□□ 1.19
IRF3-212ENST00000596756 ARHGAP35Q9NRY4 1499 aa22.51■■□□□ 1.19
IRF3-212ENST00000596756 DENND4BO75064 1496 aaPredicted RBP22.5■■□□□ 1.19
IRF3-212ENST00000596756 RICTORQ6R327 1708 aa22.5■■□□□ 1.19
IRF3-212ENST00000596756 TTC37Q6PGP7 1564 aa22.5■■□□□ 1.19
IRF3-212ENST00000596756 FANCAO15360 1455 aa22.49■■□□□ 1.19
IRF3-212ENST00000596756 FMN1Q68DA7 1419 aa22.48■■□□□ 1.19
IRF3-212ENST00000596756 ARHGEF40Q8TER5 1519 aa22.47■■□□□ 1.19
IRF3-212ENST00000596756 MADDQ8WXG6 1647 aa22.46■■□□□ 1.19
IRF3-212ENST00000596756 CFAP74Q9C0B2 1584 aa22.46■■□□□ 1.19
IRF3-212ENST00000596756 HECW1Q76N89 1606 aa22.44■■□□□ 1.18
IRF3-212ENST00000596756 ZMYM4Q5VZL5 1548 aa22.43■■□□□ 1.18
IRF3-212ENST00000596756 ARID4BQ4LE39 1312 aaPredicted RBP22.43■■□□□ 1.18
IRF3-212ENST00000596756 PLCH2O75038 1416 aa22.41■■□□□ 1.18
IRF3-212ENST00000596756 LMTK3Q96Q04 1460 aa22.39■■□□□ 1.17
IRF3-212ENST00000596756 PCF11O94913 1555 aaKnown RBP22.38■■□□□ 1.17
IRF3-212ENST00000596756 SIGLEC1Q9BZZ2 1709 aa22.38■■□□□ 1.17
IRF3-212ENST00000596756 ATP1B4Q9UN42 357 aaPredicted RBP22.38■■□□□ 1.17
IRF3-212ENST00000596756 MAGI2Q86UL8 1455 aa22.38■■□□□ 1.17
IRF3-212ENST00000596756 YEATS2Q9ULM3 1422 aa22.38■■□□□ 1.17
IRF3-212ENST00000596756 FBXO41Q8TF61 875 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms