RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 KIF27Q86VH2 1401 aa28.18■■■□□ 2.1
LIM2-202ENST00000596399 KIAA0586Q9BVV6 1533 aa28.09■■■□□ 2.09
LIM2-202ENST00000596399 CUL7Q14999 1698 aa28.09■■■□□ 2.09
LIM2-202ENST00000596399 KIF13AQ9H1H9 1805 aa28.07■■■□□ 2.08
LIM2-202ENST00000596399 CARMIL1Q5VZK9 1371 aa28.02■■■□□ 2.08
LIM2-202ENST00000596399 ADCY10Q96PN6 1610 aa28.01■■■□□ 2.07
LIM2-202ENST00000596399 NPM1P06748 294 aaKnown RBP eCLIP27.98■■■□□ 2.07
LIM2-202ENST00000596399 FAM69CQ0P6D2 419 aa27.96■■■□□ 2.07
LIM2-202ENST00000596399 TTBK1Q5TCY1 1321 aaPredicted RBP27.95■■■□□ 2.07
LIM2-202ENST00000596399 AEBP2Q6ZN18 517 aaPredicted RBP27.95■■■□□ 2.06
LIM2-202ENST00000596399 ABCC10Q5T3U5 1492 aa27.93■■■□□ 2.06
LIM2-202ENST00000596399 MAPKBP1O60336 1514 aa27.91■■■□□ 2.06
LIM2-202ENST00000596399 DIP2BQ9P265 1576 aa27.87■■■□□ 2.05
LIM2-202ENST00000596399 PTPRGP23470 1445 aa27.87■■■□□ 2.05
LIM2-202ENST00000596399 IQGAP2Q13576 1575 aa27.82■■■□□ 2.04
LIM2-202ENST00000596399 CARMIL2Q6F5E8 1435 aa27.79■■■□□ 2.04
LIM2-202ENST00000596399 TNIKQ9UKE5 1360 aa27.79■■■□□ 2.04
LIM2-202ENST00000596399 DISP1Q96F81 1524 aa27.75■■■□□ 2.03
LIM2-202ENST00000596399 RAPGEF2Q9Y4G8 1499 aa27.74■■■□□ 2.03
LIM2-202ENST00000596399 TSPOAP1O95153 1857 aa27.72■■■□□ 2.03
LIM2-202ENST00000596399 ABCC2Q92887 1545 aa27.71■■■□□ 2.03
LIM2-202ENST00000596399 ASXL2Q76L83 1435 aa27.65■■■□□ 2.02
LIM2-202ENST00000596399 UACAQ9BZF9 1416 aa27.65■■■□□ 2.02
LIM2-202ENST00000596399 UGGT2Q9NYU1 1516 aa27.63■■■□□ 2.01
LIM2-202ENST00000596399 UHRF1BP1LA0JNW5 1464 aa27.63■■■□□ 2.01
LIM2-202ENST00000596399 KDM6BO15054 1643 aa27.62■■■□□ 2.01
LIM2-202ENST00000596399 KIAA0556O60303 1618 aa27.59■■■□□ 2.01
LIM2-202ENST00000596399 PLB1Q6P1J6 1458 aa27.57■■■□□ 2
LIM2-202ENST00000596399 KDM5BQ9UGL1 1544 aa27.52■■■□□ 2
LIM2-202ENST00000596399 PPRC1Q5VV67 1664 aaKnown RBP27.52■■■□□ 2
LIM2-202ENST00000596399 GLI2P10070 1586 aa27.51■■□□□ 1.99
LIM2-202ENST00000596399 CTTNBP2Q8WZ74 1663 aa27.5■■□□□ 1.99
LIM2-202ENST00000596399 ZCCHC11Q5TAX3 1644 aaKnown RBP27.49■■□□□ 1.99
LIM2-202ENST00000596399 EPRSP07814 1512 aaKnown RBP27.46■■□□□ 1.99
LIM2-202ENST00000596399 KDM4FA0A1W2PPD8 638 aa27.46■■□□□ 1.99
LIM2-202ENST00000596399 PRXQ9BXM0 1461 aa27.45■■□□□ 1.99
LIM2-202ENST00000596399 MAP3K4Q9Y6R4 1608 aa27.39■■□□□ 1.98
LIM2-202ENST00000596399 COL17A1Q9UMD9 1497 aaPredicted RBP27.38■■□□□ 1.97
LIM2-202ENST00000596399 GOLGA3Q08378 1498 aa27.37■■□□□ 1.97
LIM2-202ENST00000596399 WDR7Q9Y4E6 1490 aa27.34■■□□□ 1.97
LIM2-202ENST00000596399 ABCA8O94911 1581 aa27.34■■□□□ 1.97
LIM2-202ENST00000596399 P3H3Q8IVL6 736 aa27.32■■□□□ 1.96
LIM2-202ENST00000596399 KCNH8Q96L42 1107 aa27.3■■□□□ 1.96
LIM2-202ENST00000596399 ARID3CA6NKF2 412 aa27.27■■□□□ 1.96
LIM2-202ENST00000596399 TEX14Q8IWB6 1497 aa27.26■■□□□ 1.95
LIM2-202ENST00000596399 CSRNP3Q8WYN3 585 aa27.26■■□□□ 1.95
LIM2-202ENST00000596399 CD109Q6YHK3 1445 aa27.2■■□□□ 1.94
LIM2-202ENST00000596399 ADGRL1O94910 1474 aa27.18■■□□□ 1.94
LIM2-202ENST00000596399 CFAP43Q8NDM7 1665 aa27.15■■□□□ 1.94
LIM2-202ENST00000596399 RANGAP1P46060 587 aaPredicted RBP27.15■■□□□ 1.94
LIM2-202ENST00000596399 ATP10BO94823 1461 aa27.14■■□□□ 1.94
LIM2-202ENST00000596399 MAGI3Q5TCQ9 1506 aa27.13■■□□□ 1.93
LIM2-202ENST00000596399 FAM9AQ8IZU1 332 aaPredicted RBP27.13■■□□□ 1.93
LIM2-202ENST00000596399 SAMD9Q5K651 1589 aa27.13■■□□□ 1.93
LIM2-202ENST00000596399 EEA1Q15075 1411 aa27.03■■□□□ 1.92
LIM2-202ENST00000596399 RAPGEF6Q8TEU7 1601 aa27.03■■□□□ 1.92
LIM2-202ENST00000596399 FHOD3Q2V2M9 1422 aa27.01■■□□□ 1.91
LIM2-202ENST00000596399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27■■□□□ 1.91
LIM2-202ENST00000596399 HNRNPUL2Q1KMD3 747 aaKnown RBP27■■□□□ 1.91
LIM2-202ENST00000596399 NUP153P49790 1475 aaKnown RBP26.97■■□□□ 1.91
LIM2-202ENST00000596399 ABCA9Q8IUA7 1624 aa26.96■■□□□ 1.91
LIM2-202ENST00000596399 EHMT2Q96KQ7 1210 aa26.94■■□□□ 1.9
LIM2-202ENST00000596399 ARAP3Q8WWN8 1544 aa26.93■■□□□ 1.9
LIM2-202ENST00000596399 KIF21BO75037 1637 aa26.9■■□□□ 1.9
LIM2-202ENST00000596399 RAPGEF3O95398 923 aa26.89■■□□□ 1.9
LIM2-202ENST00000596399 HECW2Q9P2P5 1572 aa26.81■■□□□ 1.88
LIM2-202ENST00000596399 NEO1Q92859 1461 aa26.81■■□□□ 1.88
LIM2-202ENST00000596399 PLEKHD1A6NEE1 506 aa26.8■■□□□ 1.88
LIM2-202ENST00000596399 PHLDB1Q86UU1 1377 aa26.8■■□□□ 1.88
LIM2-202ENST00000596399 EFCAB5A4FU69 1503 aa26.8■■□□□ 1.88
LIM2-202ENST00000596399 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
LIM2-202ENST00000596399 FRMPD1Q5SYB0 1578 aa26.77■■□□□ 1.88
LIM2-202ENST00000596399 UBTFP17480 764 aaKnown RBP26.76■■□□□ 1.87
LIM2-202ENST00000596399 CDK13Q14004 1512 aaKnown RBP26.75■■□□□ 1.87
LIM2-202ENST00000596399 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.73■■□□□ 1.87
LIM2-202ENST00000596399 TTC37Q6PGP7 1564 aa26.7■■□□□ 1.86
LIM2-202ENST00000596399 AKNAQ7Z591 1439 aa26.67■■□□□ 1.86
LIM2-202ENST00000596399 ATP1B4Q9UN42 357 aaPredicted RBP26.67■■□□□ 1.86
LIM2-202ENST00000596399 FANCAO15360 1455 aa26.66■■□□□ 1.86
LIM2-202ENST00000596399 ILDR1Q86SU0 546 aaPredicted RBP26.65■■□□□ 1.86
LIM2-202ENST00000596399 ARHGAP35Q9NRY4 1499 aa26.65■■□□□ 1.86
LIM2-202ENST00000596399 ADAMTSL3P82987 1691 aa26.65■■□□□ 1.86
LIM2-202ENST00000596399 DENND4BO75064 1496 aaPredicted RBP26.64■■□□□ 1.86
LIM2-202ENST00000596399 ARID4BQ4LE39 1312 aaPredicted RBP26.64■■□□□ 1.85
LIM2-202ENST00000596399 RICTORQ6R327 1708 aa26.62■■□□□ 1.85
LIM2-202ENST00000596399 PTPRMP28827 1452 aa26.62■■□□□ 1.85
LIM2-202ENST00000596399 BCORL1Q5H9F3 1711 aa26.59■■□□□ 1.85
LIM2-202ENST00000596399 FMN1Q68DA7 1419 aa26.57■■□□□ 1.84
LIM2-202ENST00000596399 ARHGEF40Q8TER5 1519 aa26.57■■□□□ 1.84
LIM2-202ENST00000596399 CFAP74Q9C0B2 1584 aa26.57■■□□□ 1.84
LIM2-202ENST00000596399 MADDQ8WXG6 1647 aa26.56■■□□□ 1.84
LIM2-202ENST00000596399 HECW1Q76N89 1606 aa26.55■■□□□ 1.84
LIM2-202ENST00000596399 PLCH2O75038 1416 aa26.53■■□□□ 1.84
LIM2-202ENST00000596399 YEATS2Q9ULM3 1422 aa26.53■■□□□ 1.84
LIM2-202ENST00000596399 SIGLEC1Q9BZZ2 1709 aa26.51■■□□□ 1.83
LIM2-202ENST00000596399 SCAPERQ9BY12 1400 aa26.5■■□□□ 1.83
LIM2-202ENST00000596399 KIF14Q15058 1648 aa26.5■■□□□ 1.83
LIM2-202ENST00000596399 ZMYM4Q5VZL5 1548 aa26.49■■□□□ 1.83
LIM2-202ENST00000596399 ZFYVE16Q7Z3T8 1539 aa26.48■■□□□ 1.83
LIM2-202ENST00000596399 LRRIQ1Q96JM4 1722 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms