RNA–Protein interactions for RNA: ENST00000594794.5

HOMER3-207, Transcript of homer scaffold protein 3, humanhuman

TSL 5 BASIC

Gene HOMER3, Length 903 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-207ENST00000594794 RUSC2Q8N2Y8 1516 aa42.05■■■■■ 4.32
HOMER3-207ENST00000594794 CUL7Q14999 1698 aa42■■■■■ 4.31
HOMER3-207ENST00000594794 KIAA0586Q9BVV6 1533 aa41.92■■■■■ 4.3
HOMER3-207ENST00000594794 CARMIL1Q5VZK9 1371 aa41.77■■■■■ 4.28
HOMER3-207ENST00000594794 MAPKBP1O60336 1514 aa41.6■■■■■ 4.25
HOMER3-207ENST00000594794 NPM1P06748 294 aaKnown RBP eCLIP41.6■■■■■ 4.25
HOMER3-207ENST00000594794 KIF13AQ9H1H9 1805 aa41.59■■■■■ 4.25
HOMER3-207ENST00000594794 ADCY10Q96PN6 1610 aa41.57■■■■■ 4.25
HOMER3-207ENST00000594794 ABCC10Q5T3U5 1492 aa41.52■■■■■ 4.24
HOMER3-207ENST00000594794 CARMIL2Q6F5E8 1435 aa41.49■■■■■ 4.23
HOMER3-207ENST00000594794 IQGAP2Q13576 1575 aa41.47■■■■■ 4.23
HOMER3-207ENST00000594794 PTPRGP23470 1445 aa41.45■■■■■ 4.23
HOMER3-207ENST00000594794 TNIKQ9UKE5 1360 aa41.43■■■■■ 4.22
HOMER3-207ENST00000594794 RAPGEF2Q9Y4G8 1499 aa41.42■■■■■ 4.22
HOMER3-207ENST00000594794 FAM69CQ0P6D2 419 aa41.39■■■■■ 4.22
HOMER3-207ENST00000594794 DIP2BQ9P265 1576 aa41.37■■■■■ 4.21
HOMER3-207ENST00000594794 AEBP2Q6ZN18 517 aaPredicted RBP41.34■■■■■ 4.21
HOMER3-207ENST00000594794 DISP1Q96F81 1524 aa41.28■■■■■ 4.2
HOMER3-207ENST00000594794 UGGT2Q9NYU1 1516 aa41.28■■■■■ 4.2
HOMER3-207ENST00000594794 ABCC2Q92887 1545 aa41.26■■■■■ 4.2
HOMER3-207ENST00000594794 UHRF1BP1LA0JNW5 1464 aa41.25■■■■■ 4.19
HOMER3-207ENST00000594794 TTBK1Q5TCY1 1321 aaPredicted RBP41.18■■■■■ 4.18
HOMER3-207ENST00000594794 UACAQ9BZF9 1416 aa41.18■■■■■ 4.18
HOMER3-207ENST00000594794 PLB1Q6P1J6 1458 aa41.11■■■■■ 4.17
HOMER3-207ENST00000594794 KIAA0556O60303 1618 aa41.09■■■■■ 4.17
HOMER3-207ENST00000594794 PRXQ9BXM0 1461 aa41.06■■■■■ 4.16
HOMER3-207ENST00000594794 ASXL2Q76L83 1435 aa41.05■■■■■ 4.16
HOMER3-207ENST00000594794 KDM5BQ9UGL1 1544 aa41.03■■■■■ 4.16
HOMER3-207ENST00000594794 CTTNBP2Q8WZ74 1663 aa41.03■■■■■ 4.16
HOMER3-207ENST00000594794 GLI2P10070 1586 aa41.03■■■■■ 4.16
HOMER3-207ENST00000594794 GOLGA3Q08378 1498 aa40.96■■■■■ 4.15
HOMER3-207ENST00000594794 KDM6BO15054 1643 aa40.96■■■■■ 4.15
HOMER3-207ENST00000594794 TSPOAP1O95153 1857 aa40.94■■■■■ 4.14
HOMER3-207ENST00000594794 ZCCHC11Q5TAX3 1644 aaKnown RBP40.85■■■■■ 4.13
HOMER3-207ENST00000594794 EPRSP07814 1512 aaKnown RBP40.83■■■■■ 4.13
HOMER3-207ENST00000594794 PPRC1Q5VV67 1664 aaKnown RBP40.79■■■■■ 4.12
HOMER3-207ENST00000594794 CSRNP3Q8WYN3 585 aa40.76■■■■■ 4.12
HOMER3-207ENST00000594794 MAP3K4Q9Y6R4 1608 aa40.74■■■■■ 4.11
HOMER3-207ENST00000594794 ABCA8O94911 1581 aa40.74■■■■■ 4.11
HOMER3-207ENST00000594794 WDR7Q9Y4E6 1490 aa40.7■■■■■ 4.11
HOMER3-207ENST00000594794 EEA1Q15075 1411 aa40.67■■■■■ 4.1
HOMER3-207ENST00000594794 TEX14Q8IWB6 1497 aa40.67■■■■■ 4.1
HOMER3-207ENST00000594794 FAM9AQ8IZU1 332 aaPredicted RBP40.63■■■■■ 4.09
HOMER3-207ENST00000594794 SAMD9Q5K651 1589 aa40.5■■■■■ 4.07
HOMER3-207ENST00000594794 P3H3Q8IVL6 736 aa40.5■■■■■ 4.07
HOMER3-207ENST00000594794 COL17A1Q9UMD9 1497 aaPredicted RBP40.5■■■■■ 4.07
HOMER3-207ENST00000594794 KDM4FA0A1W2PPD8 638 aa40.48■■■■■ 4.07
HOMER3-207ENST00000594794 MAGI3Q5TCQ9 1506 aa40.47■■■■■ 4.07
HOMER3-207ENST00000594794 CFAP43Q8NDM7 1665 aa40.47■■■■■ 4.07
HOMER3-207ENST00000594794 CHIC1Q5VXU3 224 aa40.46■■■■■ 4.07
HOMER3-207ENST00000594794 CD109Q6YHK3 1445 aa40.43■■■■■ 4.06
HOMER3-207ENST00000594794 ATP10BO94823 1461 aa40.38■■■■■ 4.05
HOMER3-207ENST00000594794 RANGAP1P46060 587 aaPredicted RBP40.37■■■■■ 4.05
HOMER3-207ENST00000594794 KCNH8Q96L42 1107 aa40.36■■■■■ 4.05
HOMER3-207ENST00000594794 RAPGEF6Q8TEU7 1601 aa40.29■■■■■ 4.04
HOMER3-207ENST00000594794 ARID3CA6NKF2 412 aa40.28■■■■■ 4.04
HOMER3-207ENST00000594794 KIF21BO75037 1637 aa40.27■■■■■ 4.04
HOMER3-207ENST00000594794 EHMT2Q96KQ7 1210 aa40.26■■■■■ 4.04
HOMER3-207ENST00000594794 ABCA9Q8IUA7 1624 aa40.19■■■■■ 4.02
HOMER3-207ENST00000594794 ADGRL1O94910 1474 aa40.19■■■■■ 4.02
HOMER3-207ENST00000594794 PHLDB1Q86UU1 1377 aa40.18■■■■■ 4.02
HOMER3-207ENST00000594794 EFCAB5A4FU69 1503 aa40.16■■■■■ 4.02
HOMER3-207ENST00000594794 ARAP3Q8WWN8 1544 aa40.15■■■■■ 4.02
HOMER3-207ENST00000594794 NUP153P49790 1475 aaKnown RBP40.14■■■■■ 4.02
HOMER3-207ENST00000594794 FHOD3Q2V2M9 1422 aa40.12■■■■■ 4.01
HOMER3-207ENST00000594794 UBTFP17480 764 aaKnown RBP40.04■■■■■ 4
HOMER3-207ENST00000594794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.02■■■■■ 4
HOMER3-207ENST00000594794 HNRNPUL2Q1KMD3 747 aaKnown RBP40.02■■■■■ 4
HOMER3-207ENST00000594794 NEO1Q92859 1461 aa40■■■■□ 3.99
HOMER3-207ENST00000594794 PLEKHD1A6NEE1 506 aa39.95■■■■□ 3.99
HOMER3-207ENST00000594794 FMN1Q68DA7 1419 aa39.81■■■■□ 3.96
HOMER3-207ENST00000594794 RAPGEF3O95398 923 aa39.76■■■■□ 3.96
HOMER3-207ENST00000594794 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.75■■■■□ 3.95
HOMER3-207ENST00000594794 ARHGAP35Q9NRY4 1499 aa39.74■■■■□ 3.95
HOMER3-207ENST00000594794 FRMPD1Q5SYB0 1578 aa39.72■■■■□ 3.95
HOMER3-207ENST00000594794 CFAP74Q9C0B2 1584 aa39.72■■■■□ 3.95
HOMER3-207ENST00000594794 FANCAO15360 1455 aa39.68■■■■□ 3.94
HOMER3-207ENST00000594794 AKNAQ7Z591 1439 aa39.68■■■■□ 3.94
HOMER3-207ENST00000594794 CDK13Q14004 1512 aaKnown RBP39.68■■■■□ 3.94
HOMER3-207ENST00000594794 HECW1Q76N89 1606 aa39.67■■■■□ 3.94
HOMER3-207ENST00000594794 ATP1B4Q9UN42 357 aaPredicted RBP39.67■■■■□ 3.94
HOMER3-207ENST00000594794 DENND4BO75064 1496 aaPredicted RBP39.66■■■■□ 3.94
HOMER3-207ENST00000594794 TTC37Q6PGP7 1564 aa39.65■■■■□ 3.94
HOMER3-207ENST00000594794 RICTORQ6R327 1708 aa39.6■■■■□ 3.93
HOMER3-207ENST00000594794 HECW2Q9P2P5 1572 aa39.59■■■■□ 3.93
HOMER3-207ENST00000594794 CDK11AQ9UQ88 783 aaPredicted RBP39.59■■■■□ 3.93
HOMER3-207ENST00000594794 ADAMTSL3P82987 1691 aa39.57■■■■□ 3.93
HOMER3-207ENST00000594794 PLCH2O75038 1416 aa39.57■■■■□ 3.92
HOMER3-207ENST00000594794 ARHGEF40Q8TER5 1519 aa39.55■■■■□ 3.92
HOMER3-207ENST00000594794 ZMYM4Q5VZL5 1548 aa39.54■■■■□ 3.92
HOMER3-207ENST00000594794 ILDR1Q86SU0 546 aaPredicted RBP39.5■■■■□ 3.91
HOMER3-207ENST00000594794 MAGI2Q86UL8 1455 aa39.49■■■■□ 3.91
HOMER3-207ENST00000594794 BCORL1Q5H9F3 1711 aa39.48■■■■□ 3.91
HOMER3-207ENST00000594794 PTPRMP28827 1452 aa39.46■■■■□ 3.91
HOMER3-207ENST00000594794 TROQ12816 1431 aaPredicted RBP39.45■■■■□ 3.91
HOMER3-207ENST00000594794 MYO5CQ9NQX4 1742 aa39.41■■■■□ 3.9
HOMER3-207ENST00000594794 ARID4BQ4LE39 1312 aaPredicted RBP39.4■■■■□ 3.9
HOMER3-207ENST00000594794 EFCAB2Q5VUJ9 269 aa39.4■■■■□ 3.9
HOMER3-207ENST00000594794 KIF14Q15058 1648 aa39.4■■■■□ 3.9
HOMER3-207ENST00000594794 CLIP1P30622 1438 aa39.4■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms