RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 KIF27Q86VH2 1401 aa30.76■■■□□ 2.51
SHKBP1-203ENST00000594298 KIAA0586Q9BVV6 1533 aa30.7■■■□□ 2.51
SHKBP1-203ENST00000594298 CUL7Q14999 1698 aa30.67■■■□□ 2.5
SHKBP1-203ENST00000594298 KIF13AQ9H1H9 1805 aa30.59■■■□□ 2.49
SHKBP1-203ENST00000594298 NPM1P06748 294 aaKnown RBP eCLIP30.58■■■□□ 2.49
SHKBP1-203ENST00000594298 AEBP2Q6ZN18 517 aaPredicted RBP30.58■■■□□ 2.49
SHKBP1-203ENST00000594298 MAPKBP1O60336 1514 aa30.57■■■□□ 2.48
SHKBP1-203ENST00000594298 ABCC10Q5T3U5 1492 aa30.56■■■□□ 2.48
SHKBP1-203ENST00000594298 CARMIL1Q5VZK9 1371 aa30.54■■■□□ 2.48
SHKBP1-203ENST00000594298 ADCY10Q96PN6 1610 aa30.54■■■□□ 2.48
SHKBP1-203ENST00000594298 FAM69CQ0P6D2 419 aa30.5■■■□□ 2.47
SHKBP1-203ENST00000594298 DIP2BQ9P265 1576 aa30.44■■■□□ 2.46
SHKBP1-203ENST00000594298 PTPRGP23470 1445 aa30.42■■■□□ 2.46
SHKBP1-203ENST00000594298 CARMIL2Q6F5E8 1435 aa30.39■■■□□ 2.45
SHKBP1-203ENST00000594298 TNIKQ9UKE5 1360 aa30.37■■■□□ 2.45
SHKBP1-203ENST00000594298 IQGAP2Q13576 1575 aa30.34■■■□□ 2.45
SHKBP1-203ENST00000594298 ABCC2Q92887 1545 aa30.27■■■□□ 2.44
SHKBP1-203ENST00000594298 RAPGEF2Q9Y4G8 1499 aa30.26■■■□□ 2.44
SHKBP1-203ENST00000594298 DISP1Q96F81 1524 aa30.24■■■□□ 2.43
SHKBP1-203ENST00000594298 UHRF1BP1LA0JNW5 1464 aa30.24■■■□□ 2.43
SHKBP1-203ENST00000594298 TTBK1Q5TCY1 1321 aaPredicted RBP30.23■■■□□ 2.43
SHKBP1-203ENST00000594298 UACAQ9BZF9 1416 aa30.2■■■□□ 2.42
SHKBP1-203ENST00000594298 UGGT2Q9NYU1 1516 aa30.19■■■□□ 2.42
SHKBP1-203ENST00000594298 PLB1Q6P1J6 1458 aa30.18■■■□□ 2.42
SHKBP1-203ENST00000594298 KDM6BO15054 1643 aa30.18■■■□□ 2.42
SHKBP1-203ENST00000594298 ASXL2Q76L83 1435 aa30.17■■■□□ 2.42
SHKBP1-203ENST00000594298 GLI2P10070 1586 aa30.12■■■□□ 2.41
SHKBP1-203ENST00000594298 TSPOAP1O95153 1857 aa30.09■■■□□ 2.41
SHKBP1-203ENST00000594298 KDM5BQ9UGL1 1544 aa30.09■■■□□ 2.41
SHKBP1-203ENST00000594298 KIAA0556O60303 1618 aa30.07■■■□□ 2.4
SHKBP1-203ENST00000594298 EPRSP07814 1512 aaKnown RBP30■■■□□ 2.39
SHKBP1-203ENST00000594298 PPRC1Q5VV67 1664 aaKnown RBP29.98■■■□□ 2.39
SHKBP1-203ENST00000594298 KDM4FA0A1W2PPD8 638 aa29.96■■■□□ 2.39
SHKBP1-203ENST00000594298 ZCCHC11Q5TAX3 1644 aaKnown RBP29.95■■■□□ 2.38
SHKBP1-203ENST00000594298 PRXQ9BXM0 1461 aa29.94■■■□□ 2.38
SHKBP1-203ENST00000594298 GOLGA3Q08378 1498 aa29.93■■■□□ 2.38
SHKBP1-203ENST00000594298 CTTNBP2Q8WZ74 1663 aa29.92■■■□□ 2.38
SHKBP1-203ENST00000594298 MAP3K4Q9Y6R4 1608 aa29.91■■■□□ 2.38
SHKBP1-203ENST00000594298 TEX14Q8IWB6 1497 aa29.87■■■□□ 2.37
SHKBP1-203ENST00000594298 WDR7Q9Y4E6 1490 aa29.87■■■□□ 2.37
SHKBP1-203ENST00000594298 COL17A1Q9UMD9 1497 aaPredicted RBP29.85■■■□□ 2.37
SHKBP1-203ENST00000594298 ABCA8O94911 1581 aa29.83■■■□□ 2.37
SHKBP1-203ENST00000594298 MAGI3Q5TCQ9 1506 aa29.71■■■□□ 2.35
SHKBP1-203ENST00000594298 CD109Q6YHK3 1445 aa29.69■■■□□ 2.34
SHKBP1-203ENST00000594298 ADGRL1O94910 1474 aa29.68■■■□□ 2.34
SHKBP1-203ENST00000594298 CSRNP3Q8WYN3 585 aa29.66■■■□□ 2.34
SHKBP1-203ENST00000594298 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
SHKBP1-203ENST00000594298 FAM9AQ8IZU1 332 aaPredicted RBP29.65■■■□□ 2.34
SHKBP1-203ENST00000594298 KCNH8Q96L42 1107 aa29.65■■■□□ 2.34
SHKBP1-203ENST00000594298 ATP10BO94823 1461 aa29.59■■■□□ 2.33
SHKBP1-203ENST00000594298 P3H3Q8IVL6 736 aa29.58■■■□□ 2.33
SHKBP1-203ENST00000594298 SAMD9Q5K651 1589 aa29.56■■■□□ 2.32
SHKBP1-203ENST00000594298 EEA1Q15075 1411 aa29.55■■■□□ 2.32
SHKBP1-203ENST00000594298 ARID3CA6NKF2 412 aa29.5■■■□□ 2.31
SHKBP1-203ENST00000594298 ARAP3Q8WWN8 1544 aa29.47■■■□□ 2.31
SHKBP1-203ENST00000594298 RAPGEF6Q8TEU7 1601 aa29.45■■■□□ 2.3
SHKBP1-203ENST00000594298 PHLDB1Q86UU1 1377 aa29.44■■■□□ 2.3
SHKBP1-203ENST00000594298 ABCA9Q8IUA7 1624 aa29.44■■■□□ 2.3
SHKBP1-203ENST00000594298 NUP153P49790 1475 aaKnown RBP29.38■■■□□ 2.29
SHKBP1-203ENST00000594298 FHOD3Q2V2M9 1422 aa29.35■■■□□ 2.29
SHKBP1-203ENST00000594298 NEO1Q92859 1461 aa29.34■■■□□ 2.29
SHKBP1-203ENST00000594298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.33■■■□□ 2.29
SHKBP1-203ENST00000594298 HNRNPUL2Q1KMD3 747 aaKnown RBP29.33■■■□□ 2.29
SHKBP1-203ENST00000594298 RANGAP1P46060 587 aaPredicted RBP29.3■■■□□ 2.28
SHKBP1-203ENST00000594298 KIF21BO75037 1637 aa29.29■■■□□ 2.28
SHKBP1-203ENST00000594298 HECW2Q9P2P5 1572 aa29.29■■■□□ 2.28
SHKBP1-203ENST00000594298 EFCAB5A4FU69 1503 aa29.28■■■□□ 2.28
SHKBP1-203ENST00000594298 RAPGEF3O95398 923 aa29.25■■■□□ 2.27
SHKBP1-203ENST00000594298 PLEKHD1A6NEE1 506 aa29.24■■■□□ 2.27
SHKBP1-203ENST00000594298 FRMPD1Q5SYB0 1578 aa29.18■■■□□ 2.26
SHKBP1-203ENST00000594298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.12■■■□□ 2.25
SHKBP1-203ENST00000594298 ILDR1Q86SU0 546 aaPredicted RBP29.12■■■□□ 2.25
SHKBP1-203ENST00000594298 ADAMTSL3P82987 1691 aa29.11■■■□□ 2.25
SHKBP1-203ENST00000594298 AKNAQ7Z591 1439 aa29.11■■■□□ 2.25
SHKBP1-203ENST00000594298 DENND4BO75064 1496 aaPredicted RBP29.1■■■□□ 2.25
SHKBP1-203ENST00000594298 FANCAO15360 1455 aa29.1■■■□□ 2.25
SHKBP1-203ENST00000594298 PTPRMP28827 1452 aa29.09■■■□□ 2.25
SHKBP1-203ENST00000594298 CFAP74Q9C0B2 1584 aa29.07■■■□□ 2.24
SHKBP1-203ENST00000594298 TTC37Q6PGP7 1564 aa29.05■■■□□ 2.24
SHKBP1-203ENST00000594298 CDK13Q14004 1512 aaKnown RBP29.04■■■□□ 2.24
SHKBP1-203ENST00000594298 ARHGEF40Q8TER5 1519 aa29.04■■■□□ 2.24
SHKBP1-203ENST00000594298 UBTFP17480 764 aaKnown RBP29.03■■■□□ 2.24
SHKBP1-203ENST00000594298 BCORL1Q5H9F3 1711 aa29.03■■■□□ 2.24
SHKBP1-203ENST00000594298 RICTORQ6R327 1708 aa29.03■■■□□ 2.24
SHKBP1-203ENST00000594298 FMN1Q68DA7 1419 aa29.03■■■□□ 2.24
SHKBP1-203ENST00000594298 ARID4BQ4LE39 1312 aaPredicted RBP29.01■■■□□ 2.23
SHKBP1-203ENST00000594298 CHIC1Q5VXU3 224 aa28.99■■■□□ 2.23
SHKBP1-203ENST00000594298 ZMYM4Q5VZL5 1548 aa28.99■■■□□ 2.23
SHKBP1-203ENST00000594298 ARHGAP35Q9NRY4 1499 aa28.98■■■□□ 2.23
SHKBP1-203ENST00000594298 PLCH2O75038 1416 aa28.97■■■□□ 2.23
SHKBP1-203ENST00000594298 HECW1Q76N89 1606 aa28.95■■■□□ 2.23
SHKBP1-203ENST00000594298 MADDQ8WXG6 1647 aa28.94■■■□□ 2.22
SHKBP1-203ENST00000594298 MAGI2Q86UL8 1455 aa28.94■■■□□ 2.22
SHKBP1-203ENST00000594298 EHMT2Q96KQ7 1210 aa28.93■■■□□ 2.22
SHKBP1-203ENST00000594298 CDK11AQ9UQ88 783 aaPredicted RBP28.91■■■□□ 2.22
SHKBP1-203ENST00000594298 ZFYVE16Q7Z3T8 1539 aa28.9■■■□□ 2.22
SHKBP1-203ENST00000594298 POGZQ7Z3K3 1410 aa28.89■■■□□ 2.22
SHKBP1-203ENST00000594298 SCAPERQ9BY12 1400 aa28.89■■■□□ 2.22
SHKBP1-203ENST00000594298 YEATS2Q9ULM3 1422 aa28.89■■■□□ 2.22
SHKBP1-203ENST00000594298 ATP1B4Q9UN42 357 aaPredicted RBP28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms