RNA–Protein interactions for RNA: ENST00000592361.2

MBD3-210, Transcript of methyl-CpG binding domain protein 3, human

TSL 5

Gene MBD3, Length 907 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD3-210	ENST00000592361	JPH4	Q96JJ6	628 aa		29.51	■■■□□ 2.31
MBD3-210	ENST00000592361	IGF1R	P08069	1367 aa		29.48	■■■□□ 2.31
MBD3-210	ENST00000592361	KIAA0586	Q9BVV6	1533 aa		29.47	■■■□□ 2.31
MBD3-210	ENST00000592361	KIF13A	Q9H1H9	1805 aa		29.37	■■■□□ 2.29
MBD3-210	ENST00000592361	CARMIL1	Q5VZK9	1371 aa		29.37	■■■□□ 2.29
MBD3-210	ENST00000592361	IQGAP2	Q13576	1575 aa		29.3	■■■□□ 2.28
MBD3-210	ENST00000592361	NPM1	P06748	294 aa	Known RBP eCLIP	29.3	■■■□□ 2.28
MBD3-210	ENST00000592361	ADCY10	Q96PN6	1610 aa		29.28	■■■□□ 2.28
MBD3-210	ENST00000592361	MAPKBP1	O60336	1514 aa		29.26	■■■□□ 2.27
MBD3-210	ENST00000592361	CARMIL2	Q6F5E8	1435 aa		29.26	■■■□□ 2.27
MBD3-210	ENST00000592361	RAPGEF2	Q9Y4G8	1499 aa		29.18	■■■□□ 2.26
MBD3-210	ENST00000592361	CTTNBP2	Q8WZ74	1663 aa		29.15	■■■□□ 2.26
MBD3-210	ENST00000592361	DIP2B	Q9P265	1576 aa		29.14	■■■□□ 2.26
MBD3-210	ENST00000592361	ABCC10	Q5T3U5	1492 aa		29.14	■■■□□ 2.26
MBD3-210	ENST00000592361	PTPRG	P23470	1445 aa		29.13	■■■□□ 2.25
MBD3-210	ENST00000592361	TNIK	Q9UKE5	1360 aa		29.12	■■■□□ 2.25
MBD3-210	ENST00000592361	UGGT2	Q9NYU1	1516 aa		29.05	■■■□□ 2.24
MBD3-210	ENST00000592361	FAM69C	Q0P6D2	419 aa		29.04	■■■□□ 2.24
MBD3-210	ENST00000592361	ABCC2	Q92887	1545 aa		29.02	■■■□□ 2.24
MBD3-210	ENST00000592361	KIAA0556	O60303	1618 aa		29.02	■■■□□ 2.24
MBD3-210	ENST00000592361	TSPOAP1	O95153	1857 aa		29.01	■■■□□ 2.23
MBD3-210	ENST00000592361	DISP1	Q96F81	1524 aa		29	■■■□□ 2.23
MBD3-210	ENST00000592361	UHRF1BP1L	A0JNW5	1464 aa		28.98	■■■□□ 2.23
MBD3-210	ENST00000592361	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.98	■■■□□ 2.23
MBD3-210	ENST00000592361	UACA	Q9BZF9	1416 aa		28.94	■■■□□ 2.22
MBD3-210	ENST00000592361	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.93	■■■□□ 2.22
MBD3-210	ENST00000592361	GOLGA3	Q08378	1498 aa		28.92	■■■□□ 2.22
MBD3-210	ENST00000592361	PLB1	Q6P1J6	1458 aa		28.92	■■■□□ 2.22
MBD3-210	ENST00000592361	KDM6B	O15054	1643 aa		28.91	■■■□□ 2.22
MBD3-210	ENST00000592361	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.86	■■■□□ 2.21
MBD3-210	ENST00000592361	ASXL2	Q76L83	1435 aa		28.86	■■■□□ 2.21
MBD3-210	ENST00000592361	PRX	Q9BXM0	1461 aa		28.85	■■■□□ 2.21
MBD3-210	ENST00000592361	GLI2	P10070	1586 aa		28.85	■■■□□ 2.21
MBD3-210	ENST00000592361	KDM5B	Q9UGL1	1544 aa		28.83	■■■□□ 2.21
MBD3-210	ENST00000592361	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.76	■■■□□ 2.19
MBD3-210	ENST00000592361	EEA1	Q15075	1411 aa		28.73	■■■□□ 2.19
MBD3-210	ENST00000592361	PPRC1	Q5VV67	1664 aa	Known RBP	28.73	■■■□□ 2.19
MBD3-210	ENST00000592361	MAP3K4	Q9Y6R4	1608 aa		28.72	■■■□□ 2.19
MBD3-210	ENST00000592361	EPRS	P07814	1512 aa	Known RBP	28.69	■■■□□ 2.18
MBD3-210	ENST00000592361	ABCA8	O94911	1581 aa		28.68	■■■□□ 2.18
MBD3-210	ENST00000592361	TEX14	Q8IWB6	1497 aa		28.68	■■■□□ 2.18
MBD3-210	ENST00000592361	WDR7	Q9Y4E6	1490 aa		28.66	■■■□□ 2.18
MBD3-210	ENST00000592361	CSRNP3	Q8WYN3	585 aa		28.63	■■■□□ 2.17
MBD3-210	ENST00000592361	CFAP43	Q8NDM7	1665 aa		28.62	■■■□□ 2.17
MBD3-210	ENST00000592361	SAMD9	Q5K651	1589 aa		28.59	■■■□□ 2.17
MBD3-210	ENST00000592361	KIF21B	O75037	1637 aa		28.5	■■■□□ 2.15
MBD3-210	ENST00000592361	RAPGEF6	Q8TEU7	1601 aa		28.49	■■■□□ 2.15
MBD3-210	ENST00000592361	MAGI3	Q5TCQ9	1506 aa		28.43	■■■□□ 2.14
MBD3-210	ENST00000592361	CD109	Q6YHK3	1445 aa		28.43	■■■□□ 2.14
MBD3-210	ENST00000592361	P3H3	Q8IVL6	736 aa		28.41	■■■□□ 2.14
MBD3-210	ENST00000592361	EFCAB5	A4FU69	1503 aa		28.41	■■■□□ 2.14
MBD3-210	ENST00000592361	KCNH8	Q96L42	1107 aa		28.38	■■■□□ 2.13
MBD3-210	ENST00000592361	ATP10B	O94823	1461 aa		28.35	■■■□□ 2.13
MBD3-210	ENST00000592361	ABCA9	Q8IUA7	1624 aa		28.34	■■■□□ 2.13
MBD3-210	ENST00000592361	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.32	■■■□□ 2.12
MBD3-210	ENST00000592361	FHOD3	Q2V2M9	1422 aa		28.27	■■■□□ 2.12
MBD3-210	ENST00000592361	ARID3C	A6NKF2	412 aa		28.27	■■■□□ 2.12
MBD3-210	ENST00000592361	KDM4F	A0A1W2PPD8	638 aa		28.26	■■■□□ 2.11
MBD3-210	ENST00000592361	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.26	■■■□□ 2.11
MBD3-210	ENST00000592361	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.26	■■■□□ 2.11
MBD3-210	ENST00000592361	ADGRL1	O94910	1474 aa		28.26	■■■□□ 2.11
MBD3-210	ENST00000592361	RANGAP1	P46060	587 aa	Predicted RBP	28.25	■■■□□ 2.11
MBD3-210	ENST00000592361	NUP153	P49790	1475 aa	Known RBP	28.25	■■■□□ 2.11
MBD3-210	ENST00000592361	PHLDB1	Q86UU1	1377 aa		28.23	■■■□□ 2.11
MBD3-210	ENST00000592361	ARAP3	Q8WWN8	1544 aa		28.21	■■■□□ 2.11
MBD3-210	ENST00000592361	CFAP74	Q9C0B2	1584 aa		28.16	■■■□□ 2.1
MBD3-210	ENST00000592361	NEO1	Q92859	1461 aa		28.16	■■■□□ 2.1
MBD3-210	ENST00000592361	UBTF	P17480	764 aa	Known RBP	28.14	■■■□□ 2.1
MBD3-210	ENST00000592361	CHIC1	Q5VXU3	224 aa		28.13	■■■□□ 2.09
MBD3-210	ENST00000592361	HECW1	Q76N89	1606 aa		28.11	■■■□□ 2.09
MBD3-210	ENST00000592361	FMN1	Q68DA7	1419 aa		28.1	■■■□□ 2.09
MBD3-210	ENST00000592361	PLEKHD1	A6NEE1	506 aa		28.1	■■■□□ 2.09
MBD3-210	ENST00000592361	TTC37	Q6PGP7	1564 aa		28	■■■□□ 2.07
MBD3-210	ENST00000592361	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	28	■■■□□ 2.07	7e-8	■□□□□ 9
MBD3-210	ENST00000592361	CDK13	Q14004	1512 aa	Known RBP	27.99	■■■□□ 2.07
MBD3-210	ENST00000592361	ARHGAP35	Q9NRY4	1499 aa		27.98	■■■□□ 2.07
MBD3-210	ENST00000592361	EHMT2	Q96KQ7	1210 aa		27.98	■■■□□ 2.07
MBD3-210	ENST00000592361	RICTOR	Q6R327	1708 aa		27.97	■■■□□ 2.07
MBD3-210	ENST00000592361	MYO5C	Q9NQX4	1742 aa		27.97	■■■□□ 2.07
MBD3-210	ENST00000592361	FANCA	O15360	1455 aa		27.96	■■■□□ 2.07
MBD3-210	ENST00000592361	FRMPD1	Q5SYB0	1578 aa		27.96	■■■□□ 2.07
MBD3-210	ENST00000592361	CDK11A	Q9UQ88	783 aa	Predicted RBP	27.93	■■■□□ 2.06
MBD3-210	ENST00000592361	DENND4B	O75064	1496 aa	Predicted RBP	27.92	■■■□□ 2.06
MBD3-210	ENST00000592361	ARHGEF40	Q8TER5	1519 aa		27.92	■■■□□ 2.06
MBD3-210	ENST00000592361	KIF14	Q15058	1648 aa		27.91	■■■□□ 2.06
MBD3-210	ENST00000592361	ATP1B4	Q9UN42	357 aa	Predicted RBP	27.9	■■■□□ 2.06
MBD3-210	ENST00000592361	AKNA	Q7Z591	1439 aa		27.9	■■■□□ 2.06
MBD3-210	ENST00000592361	RAPGEF3	O95398	923 aa		27.89	■■■□□ 2.06
MBD3-210	ENST00000592361	BCORL1	Q5H9F3	1711 aa		27.86	■■■□□ 2.05
MBD3-210	ENST00000592361	ZMYM4	Q5VZL5	1548 aa		27.86	■■■□□ 2.05
MBD3-210	ENST00000592361	HECW2	Q9P2P5	1572 aa		27.86	■■■□□ 2.05
MBD3-210	ENST00000592361	CLIP1	P30622	1438 aa		27.85	■■■□□ 2.05
MBD3-210	ENST00000592361	ADAMTSL3	P82987	1691 aa		27.85	■■■□□ 2.05
MBD3-210	ENST00000592361	LRRIQ1	Q96JM4	1722 aa		27.85	■■■□□ 2.05
MBD3-210	ENST00000592361	PLCH2	O75038	1416 aa		27.81	■■■□□ 2.04
MBD3-210	ENST00000592361	CCDC18	Q5T9S5	1454 aa		27.81	■■■□□ 2.04
MBD3-210	ENST00000592361	PCF11	O94913	1555 aa	Known RBP	27.79	■■■□□ 2.04
MBD3-210	ENST00000592361	ZFYVE16	Q7Z3T8	1539 aa		27.79	■■■□□ 2.04
MBD3-210	ENST00000592361	MAGI2	Q86UL8	1455 aa		27.78	■■■□□ 2.04
MBD3-210	ENST00000592361	TRO	Q12816	1431 aa	Predicted RBP	27.78	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms