RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 IGF1RP08069 1367 aa32.91■■■□□ 2.86
CCDC43-205ENST00000592333 RUSC2Q8N2Y8 1516 aa32.87■■■□□ 2.85
CCDC43-205ENST00000592333 CUL7Q14999 1698 aa32.87■■■□□ 2.85
CCDC43-205ENST00000592333 KIAA0586Q9BVV6 1533 aa32.81■■■□□ 2.84
CCDC43-205ENST00000592333 CARMIL1Q5VZK9 1371 aa32.69■■■□□ 2.82
CCDC43-205ENST00000592333 NPM1P06748 294 aaKnown RBP eCLIP32.6■■■□□ 2.81
CCDC43-205ENST00000592333 MAPKBP1O60336 1514 aa32.55■■■□□ 2.8
CCDC43-205ENST00000592333 KIF13AQ9H1H9 1805 aa32.5■■■□□ 2.79
CCDC43-205ENST00000592333 CARMIL2Q6F5E8 1435 aa32.5■■■□□ 2.79
CCDC43-205ENST00000592333 ADCY10Q96PN6 1610 aa32.49■■■□□ 2.79
CCDC43-205ENST00000592333 ABCC10Q5T3U5 1492 aa32.48■■■□□ 2.79
CCDC43-205ENST00000592333 PTPRGP23470 1445 aa32.45■■■□□ 2.79
CCDC43-205ENST00000592333 IQGAP2Q13576 1575 aa32.45■■■□□ 2.78
CCDC43-205ENST00000592333 TNIKQ9UKE5 1360 aa32.43■■■□□ 2.78
CCDC43-205ENST00000592333 RAPGEF2Q9Y4G8 1499 aa32.42■■■□□ 2.78
CCDC43-205ENST00000592333 FAM69CQ0P6D2 419 aa32.39■■■□□ 2.78
CCDC43-205ENST00000592333 DIP2BQ9P265 1576 aa32.34■■■□□ 2.77
CCDC43-205ENST00000592333 UGGT2Q9NYU1 1516 aa32.29■■■□□ 2.76
CCDC43-205ENST00000592333 ABCC2Q92887 1545 aa32.28■■■□□ 2.76
CCDC43-205ENST00000592333 UHRF1BP1LA0JNW5 1464 aa32.28■■■□□ 2.76
CCDC43-205ENST00000592333 DISP1Q96F81 1524 aa32.27■■■□□ 2.76
CCDC43-205ENST00000592333 UACAQ9BZF9 1416 aa32.21■■■□□ 2.75
CCDC43-205ENST00000592333 PLB1Q6P1J6 1458 aa32.18■■■□□ 2.74
CCDC43-205ENST00000592333 TTBK1Q5TCY1 1321 aaPredicted RBP32.14■■■□□ 2.74
CCDC43-205ENST00000592333 KIAA0556O60303 1618 aa32.13■■■□□ 2.73
CCDC43-205ENST00000592333 PRXQ9BXM0 1461 aa32.11■■■□□ 2.73
CCDC43-205ENST00000592333 ASXL2Q76L83 1435 aa32.1■■■□□ 2.73
CCDC43-205ENST00000592333 KDM5BQ9UGL1 1544 aa32.1■■■□□ 2.73
CCDC43-205ENST00000592333 CTTNBP2Q8WZ74 1663 aa32.09■■■□□ 2.73
CCDC43-205ENST00000592333 GLI2P10070 1586 aa32.09■■■□□ 2.73
CCDC43-205ENST00000592333 GOLGA3Q08378 1498 aa32.08■■■□□ 2.73
CCDC43-205ENST00000592333 KDM6BO15054 1643 aa32.04■■■□□ 2.72
CCDC43-205ENST00000592333 TSPOAP1O95153 1857 aa31.99■■■□□ 2.71
CCDC43-205ENST00000592333 EPRSP07814 1512 aaKnown RBP31.94■■■□□ 2.7
CCDC43-205ENST00000592333 ZCCHC11Q5TAX3 1644 aaKnown RBP31.93■■■□□ 2.7
CCDC43-205ENST00000592333 CSRNP3Q8WYN3 585 aa31.88■■■□□ 2.69
CCDC43-205ENST00000592333 PPRC1Q5VV67 1664 aaKnown RBP31.87■■■□□ 2.69
CCDC43-205ENST00000592333 FAM9AQ8IZU1 332 aaPredicted RBP31.87■■■□□ 2.69
CCDC43-205ENST00000592333 EEA1Q15075 1411 aa31.86■■■□□ 2.69
CCDC43-205ENST00000592333 MAP3K4Q9Y6R4 1608 aa31.86■■■□□ 2.69
CCDC43-205ENST00000592333 ABCA8O94911 1581 aa31.85■■■□□ 2.69
CCDC43-205ENST00000592333 TEX14Q8IWB6 1497 aa31.84■■■□□ 2.69
CCDC43-205ENST00000592333 WDR7Q9Y4E6 1490 aa31.84■■■□□ 2.69
CCDC43-205ENST00000592333 SAMD9Q5K651 1589 aa31.68■■■□□ 2.66
CCDC43-205ENST00000592333 MAGI3Q5TCQ9 1506 aa31.66■■■□□ 2.66
CCDC43-205ENST00000592333 CFAP43Q8NDM7 1665 aa31.66■■■□□ 2.66
CCDC43-205ENST00000592333 KDM4FA0A1W2PPD8 638 aa31.65■■■□□ 2.66
CCDC43-205ENST00000592333 COL17A1Q9UMD9 1497 aaPredicted RBP31.65■■■□□ 2.66
CCDC43-205ENST00000592333 CD109Q6YHK3 1445 aa31.64■■■□□ 2.66
CCDC43-205ENST00000592333 KCNH8Q96L42 1107 aa31.59■■■□□ 2.65
CCDC43-205ENST00000592333 ATP10BO94823 1461 aa31.59■■■□□ 2.65
CCDC43-205ENST00000592333 P3H3Q8IVL6 736 aa31.58■■■□□ 2.65
CCDC43-205ENST00000592333 CHIC1Q5VXU3 224 aa31.52■■■□□ 2.64
CCDC43-205ENST00000592333 RAPGEF6Q8TEU7 1601 aa31.52■■■□□ 2.64
CCDC43-205ENST00000592333 KIF21BO75037 1637 aa31.51■■■□□ 2.63
CCDC43-205ENST00000592333 PHLDB1Q86UU1 1377 aa31.47■■■□□ 2.63
CCDC43-205ENST00000592333 ABCA9Q8IUA7 1624 aa31.44■■■□□ 2.62
CCDC43-205ENST00000592333 EFCAB5A4FU69 1503 aa31.44■■■□□ 2.62
CCDC43-205ENST00000592333 ARAP3Q8WWN8 1544 aa31.43■■■□□ 2.62
CCDC43-205ENST00000592333 ADGRL1O94910 1474 aa31.42■■■□□ 2.62
CCDC43-205ENST00000592333 NUP153P49790 1475 aaKnown RBP31.4■■■□□ 2.62
CCDC43-205ENST00000592333 ARID3CA6NKF2 412 aa31.39■■■□□ 2.62
CCDC43-205ENST00000592333 FHOD3Q2V2M9 1422 aa31.38■■■□□ 2.61
CCDC43-205ENST00000592333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.34■■■□□ 2.61
CCDC43-205ENST00000592333 HNRNPUL2Q1KMD3 747 aaKnown RBP31.34■■■□□ 2.61
CCDC43-205ENST00000592333 NEO1Q92859 1461 aa31.31■■■□□ 2.6
CCDC43-205ENST00000592333 RANGAP1P46060 587 aaPredicted RBP31.3■■■□□ 2.6
CCDC43-205ENST00000592333 PLEKHD1A6NEE1 506 aa31.29■■■□□ 2.6
CCDC43-205ENST00000592333 UBTFP17480 764 aaKnown RBP31.2■■■□□ 2.59
CCDC43-205ENST00000592333 FMN1Q68DA7 1419 aa31.17■■■□□ 2.58
CCDC43-205ENST00000592333 RAPGEF3O95398 923 aa31.1■■■□□ 2.57
CCDC43-205ENST00000592333 CFAP74Q9C0B2 1584 aa31.09■■■□□ 2.57
CCDC43-205ENST00000592333 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.09■■■□□ 2.57
CCDC43-205ENST00000592333 ARHGAP35Q9NRY4 1499 aa31.08■■■□□ 2.57
CCDC43-205ENST00000592333 FANCAO15360 1455 aa31.06■■■□□ 2.56
CCDC43-205ENST00000592333 AKNAQ7Z591 1439 aa31.05■■■□□ 2.56
CCDC43-205ENST00000592333 HECW1Q76N89 1606 aa31.05■■■□□ 2.56
CCDC43-205ENST00000592333 DENND4BO75064 1496 aaPredicted RBP31.04■■■□□ 2.56
CCDC43-205ENST00000592333 CDK11AQ9UQ88 783 aaPredicted RBP31.03■■■□□ 2.56
CCDC43-205ENST00000592333 FRMPD1Q5SYB0 1578 aa31.03■■■□□ 2.56
CCDC43-205ENST00000592333 CDK13Q14004 1512 aaKnown RBP31.02■■■□□ 2.56
CCDC43-205ENST00000592333 TTC37Q6PGP7 1564 aa30.99■■■□□ 2.55
CCDC43-205ENST00000592333 PLCH2O75038 1416 aa30.97■■■□□ 2.55
CCDC43-205ENST00000592333 RICTORQ6R327 1708 aa30.96■■■□□ 2.55
CCDC43-205ENST00000592333 EHMT2Q96KQ7 1210 aa30.95■■■□□ 2.55
CCDC43-205ENST00000592333 HECW2Q9P2P5 1572 aa30.95■■■□□ 2.54
CCDC43-205ENST00000592333 ADAMTSL3P82987 1691 aa30.94■■■□□ 2.54
CCDC43-205ENST00000592333 MAGI2Q86UL8 1455 aa30.92■■■□□ 2.54
CCDC43-205ENST00000592333 ZMYM4Q5VZL5 1548 aa30.92■■■□□ 2.54
CCDC43-205ENST00000592333 ARHGEF40Q8TER5 1519 aa30.92■■■□□ 2.54
CCDC43-205ENST00000592333 ATP1B4Q9UN42 357 aaPredicted RBP30.91■■■□□ 2.54
CCDC43-205ENST00000592333 BCORL1Q5H9F3 1711 aa30.87■■■□□ 2.53
CCDC43-205ENST00000592333 TROQ12816 1431 aaPredicted RBP30.87■■■□□ 2.53
CCDC43-205ENST00000592333 PTPRMP28827 1452 aa30.86■■■□□ 2.53
CCDC43-205ENST00000592333 EFCAB2Q5VUJ9 269 aa30.85■■■□□ 2.53
CCDC43-205ENST00000592333 CLIP1P30622 1438 aa30.84■■■□□ 2.53
CCDC43-205ENST00000592333 ARID4BQ4LE39 1312 aaPredicted RBP30.84■■■□□ 2.53
CCDC43-205ENST00000592333 KIF14Q15058 1648 aa30.83■■■□□ 2.53
CCDC43-205ENST00000592333 SCAPERQ9BY12 1400 aa30.82■■■□□ 2.52
CCDC43-205ENST00000592333 MYO5CQ9NQX4 1742 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms