RNA–Protein interactions for RNA: ENST00000592052.1

TMEM259-208, Transcript of transmembrane protein 259, humanhuman

Gene TMEM259, Length 1,637 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-208ENST00000592052 DNAJC5Q9H3Z4 198 aa40.58■■■■■ 4.09
TMEM259-208ENST00000592052 EHMT2Q96KQ7 1210 aa40.56■■■■■ 4.08
TMEM259-208ENST00000592052 CTTNBP2Q8WZ74 1663 aa40.49■■■■■ 4.07
TMEM259-208ENST00000592052 IQGAP2Q13576 1575 aa40.49■■■■■ 4.07
TMEM259-208ENST00000592052 UBTFP17480 764 aaKnown RBP40.47■■■■■ 4.07
TMEM259-208ENST00000592052 JPH4Q96JJ6 628 aa40.47■■■■■ 4.07
TMEM259-208ENST00000592052 SHROOM2Q13796 1616 aa40.44■■■■■ 4.06
TMEM259-208ENST00000592052 PRG4Q92954 1404 aaPredicted RBP40.34■■■■■ 4.05
TMEM259-208ENST00000592052 ARHGEF11O15085 1522 aa40.33■■■■■ 4.05
TMEM259-208ENST00000592052 UGGT2Q9NYU1 1516 aa40.28■■■■■ 4.04
TMEM259-208ENST00000592052 RIMBP3CA6NJZ7 1639 aa40.24■■■■■ 4.03
TMEM259-208ENST00000592052 RIMBP3BA6NNM3 1639 aa40.24■■■■■ 4.03
TMEM259-208ENST00000592052 RIMBP3Q9UFD9 1639 aa40.24■■■■■ 4.03
TMEM259-208ENST00000592052 LOC105371045A0A1W2PR82 267 aa40.22■■■■■ 4.03
TMEM259-208ENST00000592052 ERCC6L2Q5T890 1561 aa40.22■■■■■ 4.03
TMEM259-208ENST00000592052 CARMIL2Q6F5E8 1435 aa40.21■■■■■ 4.03
TMEM259-208ENST00000592052 TNIKQ9UKE5 1360 aa40.2■■■■■ 4.03
TMEM259-208ENST00000592052 RANGAP1P46060 587 aaPredicted RBP40.16■■■■■ 4.02
TMEM259-208ENST00000592052 DISP1Q96F81 1524 aa40.15■■■■■ 4.02
TMEM259-208ENST00000592052 KIAA0556O60303 1618 aa40.08■■■■■ 4.01
TMEM259-208ENST00000592052 ARAP1Q96P48 1450 aa40.04■■■■■ 4
TMEM259-208ENST00000592052 SAMD9Q5K651 1589 aa40.03■■■■■ 4
TMEM259-208ENST00000592052 EFCAB5A4FU69 1503 aa40■■■■□ 3.99
TMEM259-208ENST00000592052 P3H3Q8IVL6 736 aa39.97■■■■□ 3.99
TMEM259-208ENST00000592052 CYB5RLQ6IPT4 315 aa39.96■■■■□ 3.99
TMEM259-208ENST00000592052 PTPRGP23470 1445 aa39.95■■■■□ 3.99
TMEM259-208ENST00000592052 TTBK1Q5TCY1 1321 aaPredicted RBP39.92■■■■□ 3.98
TMEM259-208ENST00000592052 CLIP1P30622 1438 aa39.89■■■■□ 3.98
TMEM259-208ENST00000592052 ARHGAP35Q9NRY4 1499 aa39.89■■■■□ 3.98
TMEM259-208ENST00000592052 CEP162Q5TB80 1403 aa39.86■■■■□ 3.97
TMEM259-208ENST00000592052 FHOD3Q2V2M9 1422 aa39.85■■■■□ 3.97
TMEM259-208ENST00000592052 UACAQ9BZF9 1416 aa39.69■■■■□ 3.94
TMEM259-208ENST00000592052 FMN1Q68DA7 1419 aa39.65■■■■□ 3.94
TMEM259-208ENST00000592052 PLB1Q6P1J6 1458 aa39.64■■■■□ 3.94
TMEM259-208ENST00000592052 ABCA8O94911 1581 aa39.6■■■■□ 3.93
TMEM259-208ENST00000592052 UHRF1BP1LA0JNW5 1464 aa39.6■■■■□ 3.93
TMEM259-208ENST00000592052 ADCY10Q96PN6 1610 aa39.6■■■■□ 3.93
TMEM259-208ENST00000592052 ABCC2Q92887 1545 aa39.59■■■■□ 3.93
TMEM259-208ENST00000592052 RAPGEF6Q8TEU7 1601 aa39.53■■■■□ 3.92
TMEM259-208ENST00000592052 NPM1P06748 294 aaKnown RBP eCLIP39.49■■■■□ 3.91
TMEM259-208ENST00000592052 KDM5BQ9UGL1 1544 aa39.41■■■■□ 3.9
TMEM259-208ENST00000592052 NUP153P49790 1475 aaKnown RBP39.4■■■■□ 3.9
TMEM259-208ENST00000592052 CASKIN1Q8WXD9 1431 aa39.39■■■■□ 3.9
TMEM259-208ENST00000592052 ATP1B4Q9UN42 357 aaPredicted RBP39.39■■■■□ 3.9
TMEM259-208ENST00000592052 HECW1Q76N89 1606 aa39.36■■■■□ 3.89
TMEM259-208ENST00000592052 PCF11O94913 1555 aaKnown RBP39.35■■■■□ 3.89
TMEM259-208ENST00000592052 ARID3CA6NKF2 412 aa39.34■■■■□ 3.89
TMEM259-208ENST00000592052 FYCO1Q9BQS8 1478 aa39.34■■■■□ 3.89
TMEM259-208ENST00000592052 VPS8Q8N3P4 1428 aa39.33■■■■□ 3.89
TMEM259-208ENST00000592052 ZCCHC11Q5TAX3 1644 aaKnown RBP39.31■■■■□ 3.88
TMEM259-208ENST00000592052 ATP10BO94823 1461 aa39.3■■■■□ 3.88
TMEM259-208ENST00000592052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.25■■■■□ 3.87
TMEM259-208ENST00000592052 HNRNPUL2Q1KMD3 747 aaKnown RBP39.25■■■■□ 3.87
TMEM259-208ENST00000592052 MAPKBP1O60336 1514 aa39.23■■■■□ 3.87
TMEM259-208ENST00000592052 EPRSP07814 1512 aaKnown RBP39.23■■■■□ 3.87
TMEM259-208ENST00000592052 CDK13Q14004 1512 aaKnown RBP39.18■■■■□ 3.86
TMEM259-208ENST00000592052 ASXL2Q76L83 1435 aa39.18■■■■□ 3.86
TMEM259-208ENST00000592052 CCDC18Q5T9S5 1454 aa39.17■■■■□ 3.86
TMEM259-208ENST00000592052 LRRIQ1Q96JM4 1722 aa39.13■■■■□ 3.85
TMEM259-208ENST00000592052 WDR7Q9Y4E6 1490 aa39.08■■■■□ 3.85
TMEM259-208ENST00000592052 CDK11AQ9UQ88 783 aaPredicted RBP39.07■■■■□ 3.85
TMEM259-208ENST00000592052 PLEKHD1A6NEE1 506 aa39.07■■■■□ 3.84
TMEM259-208ENST00000592052 ABCC10Q5T3U5 1492 aa38.98■■■■□ 3.83
TMEM259-208ENST00000592052 TRHP20396 242 aaPredicted RBP38.96■■■■□ 3.83
TMEM259-208ENST00000592052 KCNH8Q96L42 1107 aa38.96■■■■□ 3.83
TMEM259-208ENST00000592052 APLP2Q06481 763 aa38.94■■■■□ 3.82
TMEM259-208ENST00000592052 DIP2BQ9P265 1576 aa38.92■■■■□ 3.82
TMEM259-208ENST00000592052 TIAM1Q13009 1591 aa38.91■■■■□ 3.82
TMEM259-208ENST00000592052 FAM69CQ0P6D2 419 aa38.91■■■■□ 3.82
TMEM259-208ENST00000592052 MAP3K1Q13233 1512 aa38.91■■■■□ 3.82
TMEM259-208ENST00000592052 CFAP43Q8NDM7 1665 aa38.9■■■■□ 3.82
TMEM259-208ENST00000592052 TROQ12816 1431 aaPredicted RBP38.9■■■■□ 3.82
TMEM259-208ENST00000592052 MAGI3Q5TCQ9 1506 aa38.86■■■■□ 3.81
TMEM259-208ENST00000592052 MTUS2Q5JR59 1369 aa38.85■■■■□ 3.81
TMEM259-208ENST00000592052 GLI2P10070 1586 aa38.83■■■■□ 3.81
TMEM259-208ENST00000592052 KIF13AQ9H1H9 1805 aa38.81■■■■□ 3.8
TMEM259-208ENST00000592052 EHBP1L1Q8N3D4 1523 aa38.76■■■■□ 3.8
TMEM259-208ENST00000592052 KIF14Q15058 1648 aa38.76■■■■□ 3.8
TMEM259-208ENST00000592052 LRRC9Q6ZRR7 1453 aa38.75■■■■□ 3.79
TMEM259-208ENST00000592052 KANK4Q5T7N3 995 aaPredicted RBP38.72■■■■□ 3.79
TMEM259-208ENST00000592052 ABCA9Q8IUA7 1624 aa38.72■■■■□ 3.79
TMEM259-208ENST00000592052 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.7■■■■□ 3.797e-7■■■□□ 18.3
TMEM259-208ENST00000592052 MAP3K4Q9Y6R4 1608 aa38.68■■■■□ 3.78
TMEM259-208ENST00000592052 CD109Q6YHK3 1445 aa38.67■■■■□ 3.78
TMEM259-208ENST00000592052 TTC37Q6PGP7 1564 aa38.64■■■■□ 3.78
TMEM259-208ENST00000592052 SUPT6HQ7KZ85 1726 aaKnown RBP38.58■■■■□ 3.77
TMEM259-208ENST00000592052 TSPOAP1O95153 1857 aa38.54■■■■□ 3.76
TMEM259-208ENST00000592052 NCOA2Q15596 1464 aa38.54■■■■□ 3.76
TMEM259-208ENST00000592052 CCNB3Q8WWL7 1395 aa38.51■■■■□ 3.76
TMEM259-208ENST00000592052 PLCH2O75038 1416 aa38.5■■■■□ 3.75
TMEM259-208ENST00000592052 TEX14Q8IWB6 1497 aa38.5■■■■□ 3.75
TMEM259-208ENST00000592052 MYO5CQ9NQX4 1742 aa38.48■■■■□ 3.75
TMEM259-208ENST00000592052 PPRC1Q5VV67 1664 aaKnown RBP38.48■■■■□ 3.75
TMEM259-208ENST00000592052 ARAP3Q8WWN8 1544 aa38.44■■■■□ 3.74
TMEM259-208ENST00000592052 GPATCH8Q9UKJ3 1502 aaKnown RBP38.44■■■■□ 3.74
TMEM259-208ENST00000592052 PPARGC1BQ86YN6 1023 aaKnown RBP38.43■■■■□ 3.74
TMEM259-208ENST00000592052 CDC42BPAQ5VT25 1732 aa38.41■■■■□ 3.74
TMEM259-208ENST00000592052 PREX2Q70Z35 1606 aa38.41■■■■□ 3.74
TMEM259-208ENST00000592052 ARHGAP5Q13017 1502 aa38.4■■■■□ 3.74
TMEM259-208ENST00000592052 FANCAO15360 1455 aa38.39■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms