RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 PDS5BQ9NTI5 1447 aa17.92■□□□□ 0.46
SMARCA4-216ENST00000591545 RRP7BPQ9NSQ0 103 aa17.91■□□□□ 0.46
SMARCA4-216ENST00000591545 FKBP8Q14318 412 aa17.9■□□□□ 0.46
SMARCA4-216ENST00000591545 UPF2Q9HAU5 1272 aaKnown RBP17.87■□□□□ 0.45
SMARCA4-216ENST00000591545 NPM2Q86SE8 214 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-216ENST00000591545 A0A0G2JS52 829 aa17.85■□□□□ 0.45
SMARCA4-216ENST00000591545 HAP1P54257 671 aaPredicted RBP17.84■□□□□ 0.45
SMARCA4-216ENST00000591545 HNRNPUQ00839 825 aaKnown RBP eCLIP17.82■□□□□ 0.44
SMARCA4-216ENST00000591545 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
SMARCA4-216ENST00000591545 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
SMARCA4-216ENST00000591545 WIZO95785 1651 aa17.81■□□□□ 0.44
SMARCA4-216ENST00000591545 CEP162Q5TB80 1403 aa17.81■□□□□ 0.44
SMARCA4-216ENST00000591545 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
SMARCA4-216ENST00000591545 ZBTB7CA1YPR0 619 aa17.8■□□□□ 0.44
SMARCA4-216ENST00000591545 CUX2O14529 1486 aa17.79■□□□□ 0.44
SMARCA4-216ENST00000591545 CARMIL1Q5VZK9 1371 aa17.78■□□□□ 0.44
SMARCA4-216ENST00000591545 HSP90AA1P07900 732 aaKnown RBP17.78■□□□□ 0.44
SMARCA4-216ENST00000591545 WDR43Q15061 677 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMARCA4-216ENST00000591545 PLEKHG5O94827 1062 aa17.77■□□□□ 0.44
SMARCA4-216ENST00000591545 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.77■□□□□ 0.43
SMARCA4-216ENST00000591545 RGL3Q3MIN7 710 aa17.76■□□□□ 0.43
SMARCA4-216ENST00000591545 GLIPR1L2Q4G1C9 344 aa17.76■□□□□ 0.43
SMARCA4-216ENST00000591545 TMC1Q8TDI8 760 aa17.76■□□□□ 0.43
SMARCA4-216ENST00000591545 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
SMARCA4-216ENST00000591545 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
SMARCA4-216ENST00000591545 CARMIL2Q6F5E8 1435 aa17.73■□□□□ 0.43
SMARCA4-216ENST00000591545 CCNB3Q8WWL7 1395 aa17.73■□□□□ 0.43
SMARCA4-216ENST00000591545 DDX10Q13206 875 aaKnown RBP17.72■□□□□ 0.43
SMARCA4-216ENST00000591545 CCDC136Q96JN2 1154 aa17.71■□□□□ 0.43
SMARCA4-216ENST00000591545 ABCC8Q09428 1581 aa17.71■□□□□ 0.43
SMARCA4-216ENST00000591545 TNIKQ9UKE5 1360 aa17.71■□□□□ 0.42
SMARCA4-216ENST00000591545 EIF5BO60841 1220 aaKnown RBP17.7■□□□□ 0.42
SMARCA4-216ENST00000591545 HDGFP51858 240 aaKnown RBP17.7■□□□□ 0.42
SMARCA4-216ENST00000591545 FHAD1B1AJZ9 1412 aa17.7■□□□□ 0.42
SMARCA4-216ENST00000591545 CDCA8Q53HL2 280 aa17.7■□□□□ 0.42
SMARCA4-216ENST00000591545 EIF4G2P78344 907 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMARCA4-216ENST00000591545 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
SMARCA4-216ENST00000591545 SOGA1O94964 1423 aa17.69■□□□□ 0.42
SMARCA4-216ENST00000591545 MLECQ14165 292 aa17.68■□□□□ 0.42
SMARCA4-216ENST00000591545 KANK1Q14678 1352 aa17.66■□□□□ 0.42
SMARCA4-216ENST00000591545 TOP2AP11388 1531 aaKnown RBP17.65■□□□□ 0.42
SMARCA4-216ENST00000591545 POGKQ9P215 609 aa17.65■□□□□ 0.42
SMARCA4-216ENST00000591545 SALL2Q9Y467 1007 aaPredicted RBP17.65■□□□□ 0.42
SMARCA4-216ENST00000591545 TDRD9Q8NDG6 1382 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-216ENST00000591545 LMOD2Q6P5Q4 547 aa17.62■□□□□ 0.41
SMARCA4-216ENST00000591545 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
SMARCA4-216ENST00000591545 CFAP53Q96M91 514 aa17.6■□□□□ 0.41
SMARCA4-216ENST00000591545 MRS2Q9HD23 443 aa17.59■□□□□ 0.41
SMARCA4-216ENST00000591545 SMARCA4P51532 1647 aa17.56■□□□□ 0.4
SMARCA4-216ENST00000591545 EFCAB2Q5VUJ9 269 aa17.55■□□□□ 0.4
SMARCA4-216ENST00000591545 CARD11Q9BXL7 1154 aa17.54■□□□□ 0.4
SMARCA4-216ENST00000591545 GGT6Q6P531 493 aa17.54■□□□□ 0.4
SMARCA4-216ENST00000591545 KNSTRNQ9Y448 316 aa17.54■□□□□ 0.4
SMARCA4-216ENST00000591545 DDRGK1Q96HY6 314 aa17.53■□□□□ 0.4
SMARCA4-216ENST00000591545 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.4
SMARCA4-216ENST00000591545 PPM1GO15355 546 aaPredicted RBP17.51■□□□□ 0.39
SMARCA4-216ENST00000591545 NBR1Q14596 966 aa17.51■□□□□ 0.39
SMARCA4-216ENST00000591545 MIER1Q8N108 512 aa17.5■□□□□ 0.39
SMARCA4-216ENST00000591545 MYH16Q9H6N6 1097 aa17.5■□□□□ 0.39
SMARCA4-216ENST00000591545 BECN1Q14457 450 aa17.47■□□□□ 0.39
SMARCA4-216ENST00000591545 ARXQ96QS3 562 aa17.46■□□□□ 0.39
SMARCA4-216ENST00000591545 HIRIP3Q9BW71 556 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-216ENST00000591545 NUDCQ9Y266 331 aa17.45■□□□□ 0.38
SMARCA4-216ENST00000591545 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
SMARCA4-216ENST00000591545 OSCARQ8IYS5 282 aa17.42■□□□□ 0.38
SMARCA4-216ENST00000591545 FMN1Q68DA7 1419 aa17.42■□□□□ 0.38
SMARCA4-216ENST00000591545 JPH4Q96JJ6 628 aa17.41■□□□□ 0.38
SMARCA4-216ENST00000591545 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.38
SMARCA4-216ENST00000591545 DCAF11Q8TEB1 546 aa17.37■□□□□ 0.37
SMARCA4-216ENST00000591545 GOLGA6L22H0YM25 854 aa17.36■□□□□ 0.37
SMARCA4-216ENST00000591545 NPHP1O15259 732 aa17.36■□□□□ 0.37
SMARCA4-216ENST00000591545 CYB5RLQ6IPT4 315 aa17.35■□□□□ 0.37
SMARCA4-216ENST00000591545 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-216ENST00000591545 ARHGAP35Q9NRY4 1499 aa17.35■□□□□ 0.37
SMARCA4-216ENST00000591545 TMF1P82094 1093 aa17.34■□□□□ 0.37
SMARCA4-216ENST00000591545 NCLP19338 710 aaKnown RBP17.34■□□□□ 0.37
SMARCA4-216ENST00000591545 RUSC2Q8N2Y8 1516 aa17.33■□□□□ 0.37
SMARCA4-216ENST00000591545 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.36
SMARCA4-216ENST00000591545 TRIM44Q96DX7 344 aaPredicted RBP17.33■□□□□ 0.36
SMARCA4-216ENST00000591545 RSPH4AQ5TD94 716 aa17.33■□□□□ 0.36
SMARCA4-216ENST00000591545 IRX6P78412 446 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-216ENST00000591545 VPS8Q8N3P4 1428 aa17.32■□□□□ 0.36
SMARCA4-216ENST00000591545 KIF3BO15066 747 aa17.31■□□□□ 0.36
SMARCA4-216ENST00000591545 EID1Q9Y6B2 187 aa17.31■□□□□ 0.36
SMARCA4-216ENST00000591545 PNNQ9H307 717 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-216ENST00000591545 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-216ENST00000591545 ANKRD30AQ9BXX3 1397 aa17.3■□□□□ 0.36
SMARCA4-216ENST00000591545 RAPGEF2Q9Y4G8 1499 aa17.3■□□□□ 0.36
SMARCA4-216ENST00000591545 PKD2Q13563 968 aa17.29■□□□□ 0.36
SMARCA4-216ENST00000591545 SAFB2Q14151 953 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMARCA4-216ENST00000591545 STK26Q9P289 416 aa17.28■□□□□ 0.36
SMARCA4-216ENST00000591545 SIN3AQ96ST3 1273 aa17.27■□□□□ 0.36
SMARCA4-216ENST00000591545 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
SMARCA4-216ENST00000591545 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-216ENST00000591545 U2SURPO15042 1029 aaKnown RBP17.26■□□□□ 0.35
SMARCA4-216ENST00000591545 PTPRGP23470 1445 aa17.25■□□□□ 0.35
SMARCA4-216ENST00000591545 SOX12O15370 315 aa17.25■□□□□ 0.35
SMARCA4-216ENST00000591545 NEUROD2Q15784 382 aa17.25■□□□□ 0.35
SMARCA4-216ENST00000591545 WASHC2CQ9Y4E1 1318 aa17.25■□□□□ 0.35
SMARCA4-216ENST00000591545 HDGFL2Q7Z4V5 671 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms