RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 ARAP1Q96P48 1450 aa34.56■■■■□ 3.12
ERCC2-212ENST00000591309 KIAA0586Q9BVV6 1533 aa34.53■■■■□ 3.12
ERCC2-212ENST00000591309 SHROOM2Q13796 1616 aa34.49■■■■□ 3.11
ERCC2-212ENST00000591309 EEA1Q15075 1411 aa34.47■■■■□ 3.11
ERCC2-212ENST00000591309 CSRNP3Q8WYN3 585 aa34.47■■■■□ 3.11
ERCC2-212ENST00000591309 PRG4Q92954 1404 aaPredicted RBP34.47■■■■□ 3.11
ERCC2-212ENST00000591309 FAM9AQ8IZU1 332 aaPredicted RBP34.41■■■■□ 3.1
ERCC2-212ENST00000591309 ERCC6L2Q5T890 1561 aa34.4■■■■□ 3.1
ERCC2-212ENST00000591309 PRXQ9BXM0 1461 aa34.37■■■■□ 3.09
ERCC2-212ENST00000591309 IQGAP2Q13576 1575 aa34.32■■■■□ 3.08
ERCC2-212ENST00000591309 CARMIL2Q6F5E8 1435 aa34.25■■■■□ 3.07
ERCC2-212ENST00000591309 CTTNBP2Q8WZ74 1663 aa34.16■■■■□ 3.06
ERCC2-212ENST00000591309 TTBK1Q5TCY1 1321 aaPredicted RBP34.13■■■■□ 3.05
ERCC2-212ENST00000591309 UGGT2Q9NYU1 1516 aa34.1■■■■□ 3.05
ERCC2-212ENST00000591309 TNIKQ9UKE5 1360 aa34.1■■■■□ 3.05
ERCC2-212ENST00000591309 PTPRGP23470 1445 aa34.09■■■■□ 3.05
ERCC2-212ENST00000591309 TRHP20396 242 aaPredicted RBP34.05■■■■□ 3.04
ERCC2-212ENST00000591309 NPM1P06748 294 aaKnown RBP eCLIP34.03■■■■□ 3.04
ERCC2-212ENST00000591309 KIF21BO75037 1637 aa34.03■■■■□ 3.04
ERCC2-212ENST00000591309 DISP1Q96F81 1524 aa34.03■■■■□ 3.04
ERCC2-212ENST00000591309 GOLGA3Q08378 1498 aa34.02■■■■□ 3.04
ERCC2-212ENST00000591309 EHMT2Q96KQ7 1210 aa33.99■■■■□ 3.03
ERCC2-212ENST00000591309 KIAA0556O60303 1618 aa33.97■■■■□ 3.03
ERCC2-212ENST00000591309 UBTFP17480 764 aaKnown RBP33.95■■■■□ 3.03
ERCC2-212ENST00000591309 RANGAP1P46060 587 aaPredicted RBP33.89■■■■□ 3.02
ERCC2-212ENST00000591309 ADCY10Q96PN6 1610 aa33.84■■■■□ 3.01
ERCC2-212ENST00000591309 P3H3Q8IVL6 736 aa33.84■■■■□ 3.01
ERCC2-212ENST00000591309 UACAQ9BZF9 1416 aa33.82■■■■□ 3
ERCC2-212ENST00000591309 UHRF1BP1LA0JNW5 1464 aa33.75■■■□□ 2.99
ERCC2-212ENST00000591309 ABCC2Q92887 1545 aa33.72■■■□□ 2.99
ERCC2-212ENST00000591309 SAMD9Q5K651 1589 aa33.7■■■□□ 2.99
ERCC2-212ENST00000591309 MAPKBP1O60336 1514 aa33.67■■■□□ 2.98
ERCC2-212ENST00000591309 PLB1Q6P1J6 1458 aa33.65■■■□□ 2.98
ERCC2-212ENST00000591309 EFCAB5A4FU69 1503 aa33.63■■■□□ 2.97
ERCC2-212ENST00000591309 FHOD3Q2V2M9 1422 aa33.59■■■□□ 2.97
ERCC2-212ENST00000591309 FAM69CQ0P6D2 419 aa33.58■■■□□ 2.97
ERCC2-212ENST00000591309 KDM5BQ9UGL1 1544 aa33.58■■■□□ 2.97
ERCC2-212ENST00000591309 ABCA8O94911 1581 aa33.57■■■□□ 2.96
ERCC2-212ENST00000591309 ABCC10Q5T3U5 1492 aa33.54■■■□□ 2.96
ERCC2-212ENST00000591309 ASXL2Q76L83 1435 aa33.52■■■□□ 2.96
ERCC2-212ENST00000591309 ZCCHC11Q5TAX3 1644 aaKnown RBP33.5■■■□□ 2.95
ERCC2-212ENST00000591309 ARID3CA6NKF2 412 aa33.47■■■□□ 2.95
ERCC2-212ENST00000591309 KIF13AQ9H1H9 1805 aa33.44■■■□□ 2.94
ERCC2-212ENST00000591309 RAPGEF6Q8TEU7 1601 aa33.44■■■□□ 2.94
ERCC2-212ENST00000591309 DIP2BQ9P265 1576 aa33.43■■■□□ 2.94
ERCC2-212ENST00000591309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.43■■■□□ 2.94
ERCC2-212ENST00000591309 HNRNPUL2Q1KMD3 747 aaKnown RBP33.43■■■□□ 2.94
ERCC2-212ENST00000591309 ARHGAP35Q9NRY4 1499 aa33.43■■■□□ 2.94
ERCC2-212ENST00000591309 FMN1Q68DA7 1419 aa33.38■■■□□ 2.93
ERCC2-212ENST00000591309 ATP10BO94823 1461 aa33.35■■■□□ 2.93
ERCC2-212ENST00000591309 WDR7Q9Y4E6 1490 aa33.35■■■□□ 2.93
ERCC2-212ENST00000591309 ATP1B4Q9UN42 357 aaPredicted RBP33.34■■■□□ 2.93
ERCC2-212ENST00000591309 KCNH8Q96L42 1107 aa33.32■■■□□ 2.92
ERCC2-212ENST00000591309 CLIP1P30622 1438 aa33.31■■■□□ 2.92
ERCC2-212ENST00000591309 EPRSP07814 1512 aaKnown RBP33.3■■■□□ 2.92
ERCC2-212ENST00000591309 NUP153P49790 1475 aaKnown RBP33.29■■■□□ 2.92
ERCC2-212ENST00000591309 GLI2P10070 1586 aa33.27■■■□□ 2.92
ERCC2-212ENST00000591309 LOC105371045A0A1W2PR82 267 aa33.23■■■□□ 2.91
ERCC2-212ENST00000591309 TSPOAP1O95153 1857 aa33.21■■■□□ 2.91
ERCC2-212ENST00000591309 PLEKHD1A6NEE1 506 aa33.21■■■□□ 2.91
ERCC2-212ENST00000591309 HECW1Q76N89 1606 aa33.17■■■□□ 2.9
ERCC2-212ENST00000591309 CEP162Q5TB80 1403 aa33.12■■■□□ 2.89
ERCC2-212ENST00000591309 CDK11AQ9UQ88 783 aaPredicted RBP33.11■■■□□ 2.89
ERCC2-212ENST00000591309 MAP3K4Q9Y6R4 1608 aa33.1■■■□□ 2.89
ERCC2-212ENST00000591309 CD109Q6YHK3 1445 aa33.09■■■□□ 2.89
ERCC2-212ENST00000591309 CDK13Q14004 1512 aaKnown RBP33.07■■■□□ 2.89
ERCC2-212ENST00000591309 TEX14Q8IWB6 1497 aa33.07■■■□□ 2.88
ERCC2-212ENST00000591309 CASKIN1Q8WXD9 1431 aa33.06■■■□□ 2.88
ERCC2-212ENST00000591309 CFAP43Q8NDM7 1665 aa33.05■■■□□ 2.88
ERCC2-212ENST00000591309 PCF11O94913 1555 aaKnown RBP33■■■□□ 2.87
ERCC2-212ENST00000591309 PPRC1Q5VV67 1664 aaKnown RBP32.98■■■□□ 2.87
ERCC2-212ENST00000591309 KDM6BO15054 1643 aa32.98■■■□□ 2.87
ERCC2-212ENST00000591309 FYCO1Q9BQS8 1478 aa32.98■■■□□ 2.87
ERCC2-212ENST00000591309 CCDC18Q5T9S5 1454 aa32.97■■■□□ 2.87
ERCC2-212ENST00000591309 MAGI3Q5TCQ9 1506 aa32.96■■■□□ 2.87
ERCC2-212ENST00000591309 ABCA9Q8IUA7 1624 aa32.95■■■□□ 2.86
ERCC2-212ENST00000591309 TROQ12816 1431 aaPredicted RBP32.85■■■□□ 2.85
ERCC2-212ENST00000591309 LRRIQ1Q96JM4 1722 aa32.85■■■□□ 2.85
ERCC2-212ENST00000591309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.82■■■□□ 2.84
ERCC2-212ENST00000591309 PHLDB1Q86UU1 1377 aa32.8■■■□□ 2.84
ERCC2-212ENST00000591309 KIF14Q15058 1648 aa32.78■■■□□ 2.84
ERCC2-212ENST00000591309 TTC37Q6PGP7 1564 aa32.75■■■□□ 2.83
ERCC2-212ENST00000591309 NEO1Q92859 1461 aa32.74■■■□□ 2.83
ERCC2-212ENST00000591309 VPS8Q8N3P4 1428 aa32.73■■■□□ 2.83
ERCC2-212ENST00000591309 COL17A1Q9UMD9 1497 aaPredicted RBP32.73■■■□□ 2.83
ERCC2-212ENST00000591309 MTUS2Q5JR59 1369 aa32.7■■■□□ 2.82
ERCC2-212ENST00000591309 PLCH2O75038 1416 aa32.68■■■□□ 2.82
ERCC2-212ENST00000591309 FANCAO15360 1455 aa32.68■■■□□ 2.82
ERCC2-212ENST00000591309 ARAP3Q8WWN8 1544 aa32.67■■■□□ 2.82
ERCC2-212ENST00000591309 CFAP74Q9C0B2 1584 aa32.66■■■□□ 2.82
ERCC2-212ENST00000591309 EFCAB2Q5VUJ9 269 aa32.66■■■□□ 2.82
ERCC2-212ENST00000591309 AKNAQ7Z591 1439 aa32.64■■■□□ 2.82
ERCC2-212ENST00000591309 MYO5CQ9NQX4 1742 aa32.63■■■□□ 2.81
ERCC2-212ENST00000591309 APLP2Q06481 763 aa32.58■■■□□ 2.81
ERCC2-212ENST00000591309 ARHGAP5Q13017 1502 aa32.57■■■□□ 2.8
ERCC2-212ENST00000591309 RAPGEF3O95398 923 aa32.57■■■□□ 2.8
ERCC2-212ENST00000591309 DENND4BO75064 1496 aaPredicted RBP32.55■■■□□ 2.8
ERCC2-212ENST00000591309 EHBP1L1Q8N3D4 1523 aa32.54■■■□□ 2.8
ERCC2-212ENST00000591309 ADGRL1O94910 1474 aa32.52■■■□□ 2.8
ERCC2-212ENST00000591309 TIAM1Q13009 1591 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms