RNA–Protein interactions for RNA: ENST00000591304.1

CLPTM1-212, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-212ENST00000591304 ERCC6L2Q5T890 1561 aa39.61■■■■□ 3.93
CLPTM1-212ENST00000591304 KIAA0586Q9BVV6 1533 aa39.58■■■■□ 3.93
CLPTM1-212ENST00000591304 PRG4Q92954 1404 aaPredicted RBP39.56■■■■□ 3.92
CLPTM1-212ENST00000591304 RAPGEF2Q9Y4G8 1499 aa39.42■■■■□ 3.9
CLPTM1-212ENST00000591304 TRHP20396 242 aaPredicted RBP39.35■■■■□ 3.89
CLPTM1-212ENST00000591304 IQGAP2Q13576 1575 aa39.3■■■■□ 3.88
CLPTM1-212ENST00000591304 CARMIL2Q6F5E8 1435 aa39.21■■■■□ 3.87
CLPTM1-212ENST00000591304 PRXQ9BXM0 1461 aa39.16■■■■□ 3.86
CLPTM1-212ENST00000591304 EEA1Q15075 1411 aa39.1■■■■□ 3.85
CLPTM1-212ENST00000591304 CTTNBP2Q8WZ74 1663 aa39.09■■■■□ 3.85
CLPTM1-212ENST00000591304 UGGT2Q9NYU1 1516 aa39.07■■■■□ 3.84
CLPTM1-212ENST00000591304 PTPRGP23470 1445 aa39.06■■■■□ 3.84
CLPTM1-212ENST00000591304 CSRNP3Q8WYN3 585 aa39.06■■■■□ 3.84
CLPTM1-212ENST00000591304 TNIKQ9UKE5 1360 aa39.06■■■■□ 3.84
CLPTM1-212ENST00000591304 NPM1P06748 294 aaKnown RBP eCLIP39.04■■■■□ 3.84
CLPTM1-212ENST00000591304 ADCY10Q96PN6 1610 aa39■■■■□ 3.83
CLPTM1-212ENST00000591304 DISP1Q96F81 1524 aa38.99■■■■□ 3.83
CLPTM1-212ENST00000591304 KIAA0556O60303 1618 aa38.9■■■■□ 3.82
CLPTM1-212ENST00000591304 CHIC1Q5VXU3 224 aa38.89■■■■□ 3.82
CLPTM1-212ENST00000591304 GOLGA3Q08378 1498 aa38.88■■■■□ 3.81
CLPTM1-212ENST00000591304 MAPKBP1O60336 1514 aa38.88■■■■□ 3.81
CLPTM1-212ENST00000591304 TTBK1Q5TCY1 1321 aaPredicted RBP38.88■■■■□ 3.81
CLPTM1-212ENST00000591304 UHRF1BP1LA0JNW5 1464 aa38.8■■■■□ 3.8
CLPTM1-212ENST00000591304 KIF13AQ9H1H9 1805 aa38.79■■■■□ 3.8
CLPTM1-212ENST00000591304 UACAQ9BZF9 1416 aa38.79■■■■□ 3.8
CLPTM1-212ENST00000591304 ABCC2Q92887 1545 aa38.76■■■■□ 3.8
CLPTM1-212ENST00000591304 FAM9AQ8IZU1 332 aaPredicted RBP38.74■■■■□ 3.79
CLPTM1-212ENST00000591304 ABCC10Q5T3U5 1492 aa38.73■■■■□ 3.79
CLPTM1-212ENST00000591304 KIF21BO75037 1637 aa38.68■■■■□ 3.78
CLPTM1-212ENST00000591304 FAM69CQ0P6D2 419 aa38.64■■■■□ 3.78
CLPTM1-212ENST00000591304 DIP2BQ9P265 1576 aa38.64■■■■□ 3.78
CLPTM1-212ENST00000591304 KDM5BQ9UGL1 1544 aa38.6■■■■□ 3.77
CLPTM1-212ENST00000591304 PLB1Q6P1J6 1458 aa38.57■■■■□ 3.76
CLPTM1-212ENST00000591304 SAMD9Q5K651 1589 aa38.53■■■■□ 3.76
CLPTM1-212ENST00000591304 ASXL2Q76L83 1435 aa38.53■■■■□ 3.76
CLPTM1-212ENST00000591304 ZCCHC11Q5TAX3 1644 aaKnown RBP38.5■■■■□ 3.75
CLPTM1-212ENST00000591304 ABCA8O94911 1581 aa38.5■■■■□ 3.75
CLPTM1-212ENST00000591304 P3H3Q8IVL6 736 aa38.44■■■■□ 3.74
CLPTM1-212ENST00000591304 GLI2P10070 1586 aa38.4■■■■□ 3.74
CLPTM1-212ENST00000591304 TSPOAP1O95153 1857 aa38.35■■■■□ 3.73
CLPTM1-212ENST00000591304 EFCAB5A4FU69 1503 aa38.34■■■■□ 3.73
CLPTM1-212ENST00000591304 UBTFP17480 764 aaKnown RBP38.34■■■■□ 3.73
CLPTM1-212ENST00000591304 RANGAP1P46060 587 aaPredicted RBP38.32■■■■□ 3.72
CLPTM1-212ENST00000591304 EPRSP07814 1512 aaKnown RBP38.31■■■■□ 3.72
CLPTM1-212ENST00000591304 WDR7Q9Y4E6 1490 aa38.29■■■■□ 3.72
CLPTM1-212ENST00000591304 RAPGEF6Q8TEU7 1601 aa38.25■■■■□ 3.71
CLPTM1-212ENST00000591304 FHOD3Q2V2M9 1422 aa38.22■■■■□ 3.71
CLPTM1-212ENST00000591304 EHMT2Q96KQ7 1210 aa38.2■■■■□ 3.71
CLPTM1-212ENST00000591304 MAP3K4Q9Y6R4 1608 aa38.2■■■■□ 3.7
CLPTM1-212ENST00000591304 ATP10BO94823 1461 aa38.17■■■■□ 3.7
CLPTM1-212ENST00000591304 KDM6BO15054 1643 aa38.14■■■■□ 3.7
CLPTM1-212ENST00000591304 PPRC1Q5VV67 1664 aaKnown RBP38.14■■■■□ 3.7
CLPTM1-212ENST00000591304 TEX14Q8IWB6 1497 aa38.09■■■■□ 3.69
CLPTM1-212ENST00000591304 KCNH8Q96L42 1107 aa38.08■■■■□ 3.69
CLPTM1-212ENST00000591304 CFAP43Q8NDM7 1665 aa38.07■■■■□ 3.69
CLPTM1-212ENST00000591304 ARID3CA6NKF2 412 aa38.07■■■■□ 3.68
CLPTM1-212ENST00000591304 NUP153P49790 1475 aaKnown RBP38.07■■■■□ 3.68
CLPTM1-212ENST00000591304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.02■■■■□ 3.68
CLPTM1-212ENST00000591304 HNRNPUL2Q1KMD3 747 aaKnown RBP38.02■■■■□ 3.68
CLPTM1-212ENST00000591304 FMN1Q68DA7 1419 aa38■■■■□ 3.67
CLPTM1-212ENST00000591304 ARHGAP35Q9NRY4 1499 aa38■■■■□ 3.67
CLPTM1-212ENST00000591304 CD109Q6YHK3 1445 aa37.99■■■■□ 3.67
CLPTM1-212ENST00000591304 MAGI3Q5TCQ9 1506 aa37.96■■■■□ 3.67
CLPTM1-212ENST00000591304 ABCA9Q8IUA7 1624 aa37.88■■■■□ 3.65
CLPTM1-212ENST00000591304 PLEKHD1A6NEE1 506 aa37.88■■■■□ 3.65
CLPTM1-212ENST00000591304 HECW1Q76N89 1606 aa37.83■■■■□ 3.65
CLPTM1-212ENST00000591304 COL17A1Q9UMD9 1497 aaPredicted RBP37.77■■■■□ 3.64
CLPTM1-212ENST00000591304 ATP1B4Q9UN42 357 aaPredicted RBP37.75■■■■□ 3.63
CLPTM1-212ENST00000591304 PHLDB1Q86UU1 1377 aa37.73■■■■□ 3.63
CLPTM1-212ENST00000591304 CDK13Q14004 1512 aaKnown RBP37.72■■■■□ 3.63
CLPTM1-212ENST00000591304 CDK11AQ9UQ88 783 aaPredicted RBP37.7■■■■□ 3.63
CLPTM1-212ENST00000591304 AEBP2Q6ZN18 517 aaPredicted RBP37.69■■■■□ 3.62
CLPTM1-212ENST00000591304 CLIP1P30622 1438 aa37.69■■■■□ 3.62
CLPTM1-212ENST00000591304 ARAP3Q8WWN8 1544 aa37.65■■■■□ 3.62
CLPTM1-212ENST00000591304 NEO1Q92859 1461 aa37.64■■■■□ 3.62
CLPTM1-212ENST00000591304 CASKIN1Q8WXD9 1431 aa37.61■■■■□ 3.61
CLPTM1-212ENST00000591304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.6■■■■□ 3.61
CLPTM1-212ENST00000591304 CCDC18Q5T9S5 1454 aa37.56■■■■□ 3.6
CLPTM1-212ENST00000591304 PCF11O94913 1555 aaKnown RBP37.55■■■■□ 3.6
CLPTM1-212ENST00000591304 LRRIQ1Q96JM4 1722 aa37.55■■■■□ 3.6
CLPTM1-212ENST00000591304 TTC37Q6PGP7 1564 aa37.52■■■■□ 3.6
CLPTM1-212ENST00000591304 CFAP74Q9C0B2 1584 aa37.52■■■■□ 3.6
CLPTM1-212ENST00000591304 FYCO1Q9BQS8 1478 aa37.52■■■■□ 3.6
CLPTM1-212ENST00000591304 TROQ12816 1431 aaPredicted RBP37.49■■■■□ 3.59
CLPTM1-212ENST00000591304 KIF14Q15058 1648 aa37.46■■■■□ 3.59
CLPTM1-212ENST00000591304 FANCAO15360 1455 aa37.45■■■■□ 3.59
CLPTM1-212ENST00000591304 PLCH2O75038 1416 aa37.41■■■■□ 3.58
CLPTM1-212ENST00000591304 CEP162Q5TB80 1403 aa37.4■■■■□ 3.58
CLPTM1-212ENST00000591304 AKNAQ7Z591 1439 aa37.4■■■■□ 3.58
CLPTM1-212ENST00000591304 MYO5CQ9NQX4 1742 aa37.4■■■■□ 3.58
CLPTM1-212ENST00000591304 KDM4FA0A1W2PPD8 638 aa37.37■■■■□ 3.57
CLPTM1-212ENST00000591304 RAPGEF3O95398 923 aa37.35■■■■□ 3.57
CLPTM1-212ENST00000591304 DENND4BO75064 1496 aaPredicted RBP37.33■■■■□ 3.57
CLPTM1-212ENST00000591304 EFCAB2Q5VUJ9 269 aa37.3■■■■□ 3.56
CLPTM1-212ENST00000591304 FRMPD1Q5SYB0 1578 aa37.29■■■■□ 3.56
CLPTM1-212ENST00000591304 ADGRL1O94910 1474 aa37.28■■■■□ 3.56
CLPTM1-212ENST00000591304 RICTORQ6R327 1708 aa37.28■■■■□ 3.56
CLPTM1-212ENST00000591304 LOC105371045A0A1W2PR82 267 aa37.25■■■■□ 3.55
CLPTM1-212ENST00000591304 ARHGAP5Q13017 1502 aa37.2■■■■□ 3.55
CLPTM1-212ENST00000591304 SCAPERQ9BY12 1400 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms