RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 RUSC2Q8N2Y8 1516 aa28.38■■■□□ 2.13
DDX39A-216ENST00000591275 FAM69CQ0P6D2 419 aa28.31■■■□□ 2.12
DDX39A-216ENST00000591275 NPM1P06748 294 aaKnown RBP eCLIP28.28■■■□□ 2.12
DDX39A-216ENST00000591275 ABCC10Q5T3U5 1492 aa28.27■■■□□ 2.12
DDX39A-216ENST00000591275 ADCY10Q96PN6 1610 aa28.24■■■□□ 2.11
DDX39A-216ENST00000591275 MAPKBP1O60336 1514 aa28.23■■■□□ 2.11
DDX39A-216ENST00000591275 DIP2BQ9P265 1576 aa28.2■■■□□ 2.1
DDX39A-216ENST00000591275 KIAA0586Q9BVV6 1533 aa28.18■■■□□ 2.1
DDX39A-216ENST00000591275 IGF1RP08069 1367 aa28.17■■■□□ 2.1
DDX39A-216ENST00000591275 KIF27Q86VH2 1401 aa28.11■■■□□ 2.09
DDX39A-216ENST00000591275 CUL7Q14999 1698 aa28.1■■■□□ 2.09
DDX39A-216ENST00000591275 TSPOAP1O95153 1857 aa28.08■■■□□ 2.09
DDX39A-216ENST00000591275 KDM6BO15054 1643 aa28.07■■■□□ 2.08
DDX39A-216ENST00000591275 TTBK1Q5TCY1 1321 aaPredicted RBP28.06■■■□□ 2.08
DDX39A-216ENST00000591275 PTPRGP23470 1445 aa28.01■■■□□ 2.08
DDX39A-216ENST00000591275 CARMIL1Q5VZK9 1371 aa27.98■■■□□ 2.07
DDX39A-216ENST00000591275 KDM4FA0A1W2PPD8 638 aa27.96■■■□□ 2.07
DDX39A-216ENST00000591275 CARMIL2Q6F5E8 1435 aa27.92■■■□□ 2.06
DDX39A-216ENST00000591275 TNIKQ9UKE5 1360 aa27.91■■■□□ 2.06
DDX39A-216ENST00000591275 ABCC2Q92887 1545 aa27.9■■■□□ 2.06
DDX39A-216ENST00000591275 IQGAP2Q13576 1575 aa27.87■■■□□ 2.05
DDX39A-216ENST00000591275 ASXL2Q76L83 1435 aa27.86■■■□□ 2.05
DDX39A-216ENST00000591275 PLB1Q6P1J6 1458 aa27.82■■■□□ 2.04
DDX39A-216ENST00000591275 PPRC1Q5VV67 1664 aaKnown RBP27.8■■■□□ 2.04
DDX39A-216ENST00000591275 UHRF1BP1LA0JNW5 1464 aa27.78■■■□□ 2.04
DDX39A-216ENST00000591275 GLI2P10070 1586 aa27.77■■■□□ 2.04
DDX39A-216ENST00000591275 DISP1Q96F81 1524 aa27.77■■■□□ 2.04
DDX39A-216ENST00000591275 UACAQ9BZF9 1416 aa27.77■■■□□ 2.04
DDX39A-216ENST00000591275 EPRSP07814 1512 aaKnown RBP27.67■■■□□ 2.02
DDX39A-216ENST00000591275 KDM5BQ9UGL1 1544 aa27.67■■■□□ 2.02
DDX39A-216ENST00000591275 RAPGEF2Q9Y4G8 1499 aa27.67■■■□□ 2.02
DDX39A-216ENST00000591275 UGGT2Q9NYU1 1516 aa27.67■■■□□ 2.02
DDX39A-216ENST00000591275 COL17A1Q9UMD9 1497 aaPredicted RBP27.66■■■□□ 2.02
DDX39A-216ENST00000591275 ZCCHC11Q5TAX3 1644 aaKnown RBP27.65■■■□□ 2.02
DDX39A-216ENST00000591275 ADGRL1O94910 1474 aa27.64■■■□□ 2.02
DDX39A-216ENST00000591275 MAP3K4Q9Y6R4 1608 aa27.64■■■□□ 2.02
DDX39A-216ENST00000591275 KIAA0556O60303 1618 aa27.63■■■□□ 2.01
DDX39A-216ENST00000591275 TEX14Q8IWB6 1497 aa27.57■■■□□ 2
DDX39A-216ENST00000591275 WDR7Q9Y4E6 1490 aa27.51■■■□□ 2
DDX39A-216ENST00000591275 ILDR1Q86SU0 546 aaPredicted RBP27.5■■□□□ 1.99
DDX39A-216ENST00000591275 CTTNBP2Q8WZ74 1663 aa27.47■■□□□ 1.99
DDX39A-216ENST00000591275 KCNH8Q96L42 1107 aa27.43■■□□□ 1.98
DDX39A-216ENST00000591275 GOLGA3Q08378 1498 aa27.4■■□□□ 1.98
DDX39A-216ENST00000591275 CD109Q6YHK3 1445 aa27.4■■□□□ 1.98
DDX39A-216ENST00000591275 HECW2Q9P2P5 1572 aa27.39■■□□□ 1.98
DDX39A-216ENST00000591275 ABCA8O94911 1581 aa27.39■■□□□ 1.97
DDX39A-216ENST00000591275 CFAP43Q8NDM7 1665 aa27.36■■□□□ 1.97
DDX39A-216ENST00000591275 MAGI3Q5TCQ9 1506 aa27.36■■□□□ 1.97
DDX39A-216ENST00000591275 ARID3CA6NKF2 412 aa27.29■■□□□ 1.96
DDX39A-216ENST00000591275 PRXQ9BXM0 1461 aa27.28■■□□□ 1.96
DDX39A-216ENST00000591275 P3H3Q8IVL6 736 aa27.24■■□□□ 1.95
DDX39A-216ENST00000591275 KIF21BO75037 1637 aa27.23■■□□□ 1.95
DDX39A-216ENST00000591275 ATP10BO94823 1461 aa27.18■■□□□ 1.94
DDX39A-216ENST00000591275 ARAP3Q8WWN8 1544 aa27.16■■□□□ 1.94
DDX39A-216ENST00000591275 FAM9AQ8IZU1 332 aaPredicted RBP27.15■■□□□ 1.94
DDX39A-216ENST00000591275 ABCA9Q8IUA7 1624 aa27.09■■□□□ 1.93
DDX39A-216ENST00000591275 RAPGEF3O95398 923 aa27.06■■□□□ 1.92
DDX39A-216ENST00000591275 SAMD9Q5K651 1589 aa27.05■■□□□ 1.92
DDX39A-216ENST00000591275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.04■■□□□ 1.92
DDX39A-216ENST00000591275 HNRNPUL2Q1KMD3 747 aaKnown RBP27.04■■□□□ 1.92
DDX39A-216ENST00000591275 RAPGEF6Q8TEU7 1601 aa27.04■■□□□ 1.92
DDX39A-216ENST00000591275 PHLDB1Q86UU1 1377 aa27.03■■□□□ 1.92
DDX39A-216ENST00000591275 CSRNP3Q8WYN3 585 aa27■■□□□ 1.91
DDX39A-216ENST00000591275 ADAMTSL3P82987 1691 aa26.99■■□□□ 1.91
DDX39A-216ENST00000591275 RANGAP1P46060 587 aaPredicted RBP26.99■■□□□ 1.91
DDX39A-216ENST00000591275 PTPRMP28827 1452 aa26.99■■□□□ 1.91
DDX39A-216ENST00000591275 NEO1Q92859 1461 aa26.98■■□□□ 1.91
DDX39A-216ENST00000591275 FRMPD1Q5SYB0 1578 aa26.95■■□□□ 1.9
DDX39A-216ENST00000591275 NUP153P49790 1475 aaKnown RBP26.94■■□□□ 1.9
DDX39A-216ENST00000591275 ARID4BQ4LE39 1312 aaPredicted RBP26.93■■□□□ 1.9
DDX39A-216ENST00000591275 FHOD3Q2V2M9 1422 aa26.9■■□□□ 1.9
DDX39A-216ENST00000591275 BCORL1Q5H9F3 1711 aa26.9■■□□□ 1.9
DDX39A-216ENST00000591275 MADDQ8WXG6 1647 aa26.88■■□□□ 1.89
DDX39A-216ENST00000591275 FBXO41Q8TF61 875 aa26.86■■□□□ 1.89
DDX39A-216ENST00000591275 PLEKHD1A6NEE1 506 aa26.83■■□□□ 1.89
DDX39A-216ENST00000591275 DENND4BO75064 1496 aaPredicted RBP26.81■■□□□ 1.88
DDX39A-216ENST00000591275 ARHGEF40Q8TER5 1519 aa26.81■■□□□ 1.88
DDX39A-216ENST00000591275 PCF11O94913 1555 aaKnown RBP26.8■■□□□ 1.88
DDX39A-216ENST00000591275 RICTORQ6R327 1708 aa26.8■■□□□ 1.88
DDX39A-216ENST00000591275 AKNAQ7Z591 1439 aa26.8■■□□□ 1.88
DDX39A-216ENST00000591275 RIMS1Q86UR5 1692 aaKnown RBP26.79■■□□□ 1.88
DDX39A-216ENST00000591275 FANCAO15360 1455 aa26.78■■□□□ 1.88
DDX39A-216ENST00000591275 LMTK3Q96Q04 1460 aa26.77■■□□□ 1.88
DDX39A-216ENST00000591275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.76■■□□□ 1.872e-7■□□□□ 10.7
DDX39A-216ENST00000591275 EEA1Q15075 1411 aa26.76■■□□□ 1.87
DDX39A-216ENST00000591275 TTC37Q6PGP7 1564 aa26.75■■□□□ 1.87
DDX39A-216ENST00000591275 PLPPR3Q6T4P5 718 aa26.74■■□□□ 1.87
DDX39A-216ENST00000591275 CFAP74Q9C0B2 1584 aa26.74■■□□□ 1.87
DDX39A-216ENST00000591275 YEATS2Q9ULM3 1422 aa26.69■■□□□ 1.86
DDX39A-216ENST00000591275 EFCAB5A4FU69 1503 aa26.69■■□□□ 1.86
DDX39A-216ENST00000591275 HSPA2P54652 639 aa26.68■■□□□ 1.86
DDX39A-216ENST00000591275 CDK13Q14004 1512 aaKnown RBP26.68■■□□□ 1.86
DDX39A-216ENST00000591275 ZMYM4Q5VZL5 1548 aa26.68■■□□□ 1.86
DDX39A-216ENST00000591275 ZFYVE16Q7Z3T8 1539 aa26.68■■□□□ 1.86
DDX39A-216ENST00000591275 SIGLEC1Q9BZZ2 1709 aa26.68■■□□□ 1.86
DDX39A-216ENST00000591275 POGZQ7Z3K3 1410 aa26.66■■□□□ 1.86
DDX39A-216ENST00000591275 MLECQ14165 292 aa26.64■■□□□ 1.86
DDX39A-216ENST00000591275 HECW1Q76N89 1606 aa26.62■■□□□ 1.85
DDX39A-216ENST00000591275 SCAPERQ9BY12 1400 aa26.6■■□□□ 1.85
DDX39A-216ENST00000591275 EHMT2Q96KQ7 1210 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms