RNA–Protein interactions for RNA: ENST00000591201.5

PCSK4-210, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 5

Gene PCSK4, Length 2,358 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-210ENST00000591201 CCNB3Q8WWL7 1395 aa23.69■■□□□ 1.38
PCSK4-210ENST00000591201 CFAP43Q8NDM7 1665 aa23.66■■□□□ 1.38
PCSK4-210ENST00000591201 AQRO60306 1485 aaKnown RBP eCLIP23.63■■□□□ 1.375e-8■■■■□ 21.5
PCSK4-210ENST00000591201 LRRC9Q6ZRR7 1453 aa23.63■■□□□ 1.37
PCSK4-210ENST00000591201 PCF11O94913 1555 aaKnown RBP23.62■■□□□ 1.37
PCSK4-210ENST00000591201 KIF21AQ7Z4S6 1674 aa23.62■■□□□ 1.37
PCSK4-210ENST00000591201 FYCO1Q9BQS8 1478 aa23.62■■□□□ 1.37
PCSK4-210ENST00000591201 GAPVD1Q14C86 1478 aa23.61■■□□□ 1.37
PCSK4-210ENST00000591201 DIEXFQ68CQ4 756 aaKnown RBP23.6■■□□□ 1.37
PCSK4-210ENST00000591201 ZNF316A6NFI3 1004 aaPredicted RBP23.6■■□□□ 1.37
PCSK4-210ENST00000591201 CASKIN1Q8WXD9 1431 aa23.57■■□□□ 1.36
PCSK4-210ENST00000591201 DHX57Q6P158 1386 aaKnown RBP23.56■■□□□ 1.36
PCSK4-210ENST00000591201 FHOD3Q2V2M9 1422 aa23.55■■□□□ 1.36
PCSK4-210ENST00000591201 FMN1Q68DA7 1419 aa23.54■■□□□ 1.36
PCSK4-210ENST00000591201 TARBP1Q13395 1621 aaKnown RBP23.53■■□□□ 1.36
PCSK4-210ENST00000591201 TDRD9Q8NDG6 1382 aaKnown RBP23.53■■□□□ 1.36
PCSK4-210ENST00000591201 SAMD9Q5K651 1589 aa23.5■■□□□ 1.35
PCSK4-210ENST00000591201 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
PCSK4-210ENST00000591201 P3H3Q8IVL6 736 aa23.45■■□□□ 1.35
PCSK4-210ENST00000591201 PHLDB1Q86UU1 1377 aa23.44■■□□□ 1.34
PCSK4-210ENST00000591201 SNAPC4Q5SXM2 1469 aa23.43■■□□□ 1.34
PCSK4-210ENST00000591201 THOC2Q8NI27 1593 aaKnown RBP23.42■■□□□ 1.34
PCSK4-210ENST00000591201 PBRM1Q86U86 1689 aa23.41■■□□□ 1.34
PCSK4-210ENST00000591201 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.41■■□□□ 1.34
PCSK4-210ENST00000591201 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
PCSK4-210ENST00000591201 SETD5Q9C0A6 1442 aa23.35■■□□□ 1.33
PCSK4-210ENST00000591201 ATP1B4Q9UN42 357 aaPredicted RBP23.35■■□□□ 1.33
PCSK4-210ENST00000591201 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
PCSK4-210ENST00000591201 RAB3GAP2Q9H2M9 1393 aa23.34■■□□□ 1.33
PCSK4-210ENST00000591201 GRIN2BQ13224 1484 aa23.33■■□□□ 1.32
PCSK4-210ENST00000591201 ITGAEP38570 1179 aa23.32■■□□□ 1.32
PCSK4-210ENST00000591201 IFT140Q96RY7 1462 aa23.31■■□□□ 1.32
PCSK4-210ENST00000591201 WDR62O43379 1518 aa23.3■■□□□ 1.32
PCSK4-210ENST00000591201 FAM50AQ14320 339 aaKnown RBP23.28■■□□□ 1.32
PCSK4-210ENST00000591201 IQGAP2Q13576 1575 aa23.27■■□□□ 1.32
PCSK4-210ENST00000591201 MTUS2Q5JR59 1369 aa23.27■■□□□ 1.32
PCSK4-210ENST00000591201 CENPBP07199 599 aaPredicted RBP23.26■■□□□ 1.31
PCSK4-210ENST00000591201 EHBP1L1Q8N3D4 1523 aa23.25■■□□□ 1.31
PCSK4-210ENST00000591201 CCDC18Q5T9S5 1454 aa23.25■■□□□ 1.31
PCSK4-210ENST00000591201 FGD6Q6ZV73 1430 aa23.25■■□□□ 1.31
PCSK4-210ENST00000591201 MAPKBP1O60336 1514 aa23.22■■□□□ 1.31
PCSK4-210ENST00000591201 LRRIQ1Q96JM4 1722 aa23.21■■□□□ 1.31
PCSK4-210ENST00000591201 ACIN1Q9UKV3 1341 aaKnown RBP23.2■■□□□ 1.31
PCSK4-210ENST00000591201 HECW1Q76N89 1606 aa23.2■■□□□ 1.31
PCSK4-210ENST00000591201 SUPT6HQ7KZ85 1726 aaKnown RBP23.2■■□□□ 1.31
PCSK4-210ENST00000591201 UGGT2Q9NYU1 1516 aa23.17■■□□□ 1.3
PCSK4-210ENST00000591201 NCOA2Q15596 1464 aa23.17■■□□□ 1.3
PCSK4-210ENST00000591201 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
PCSK4-210ENST00000591201 MYOM3Q5VTT5 1437 aa23.16■■□□□ 1.3
PCSK4-210ENST00000591201 ARHGEF11O15085 1522 aa23.13■■□□□ 1.29
PCSK4-210ENST00000591201 ZNF608Q9ULD9 1512 aaPredicted RBP23.11■■□□□ 1.29
PCSK4-210ENST00000591201 KIAA0586Q9BVV6 1533 aa23.09■■□□□ 1.29
PCSK4-210ENST00000591201 NEUROD1Q13562 356 aa23.07■■□□□ 1.28
PCSK4-210ENST00000591201 TIMELESSQ9UNS1 1208 aa23.07■■□□□ 1.28
PCSK4-210ENST00000591201 EIF4G3O43432 1585 aaKnown RBP23.07■■□□□ 1.28
PCSK4-210ENST00000591201 HFM1A2PYH4 1435 aa23.07■■□□□ 1.28
PCSK4-210ENST00000591201 EPRSP07814 1512 aaKnown RBP23.06■■□□□ 1.28
PCSK4-210ENST00000591201 MIER1Q8N108 512 aa23.06■■□□□ 1.28
PCSK4-210ENST00000591201 PTPN23Q9H3S7 1636 aa23.04■■□□□ 1.28
PCSK4-210ENST00000591201 TCOF1Q13428 1488 aaKnown RBP23.04■■□□□ 1.28
PCSK4-210ENST00000591201 MAGI3Q5TCQ9 1506 aa23.03■■□□□ 1.28
PCSK4-210ENST00000591201 GRIN2AQ12879 1464 aa23.03■■□□□ 1.28
PCSK4-210ENST00000591201 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
PCSK4-210ENST00000591201 KIAA0556O60303 1618 aa23.02■■□□□ 1.28
PCSK4-210ENST00000591201 PTPRKQ15262 1439 aa22.97■■□□□ 1.27
PCSK4-210ENST00000591201 MIA2Q96PC5 1412 aa22.97■■□□□ 1.27
PCSK4-210ENST00000591201 UACAQ9BZF9 1416 aa22.97■■□□□ 1.27
PCSK4-210ENST00000591201 DISP1Q96F81 1524 aa22.97■■□□□ 1.27
PCSK4-210ENST00000591201 AKNAQ7Z591 1439 aa22.95■■□□□ 1.26
PCSK4-210ENST00000591201 NAIPQ13075 1403 aa22.95■■□□□ 1.26
PCSK4-210ENST00000591201 CDK13Q14004 1512 aaKnown RBP22.94■■□□□ 1.26
PCSK4-210ENST00000591201 SYNJ2O15056 1496 aa22.93■■□□□ 1.26
PCSK4-210ENST00000591201 RAPGEF6Q8TEU7 1601 aa22.9■■□□□ 1.26
PCSK4-210ENST00000591201 GCC2Q8IWJ2 1684 aa22.9■■□□□ 1.26
PCSK4-210ENST00000591201 SIN3AQ96ST3 1273 aa22.87■■□□□ 1.25
PCSK4-210ENST00000591201 NUP153P49790 1475 aaKnown RBP22.85■■□□□ 1.25
PCSK4-210ENST00000591201 CEP170Q5SW79 1584 aa22.85■■□□□ 1.25
PCSK4-210ENST00000591201 FBLN2P98095 1184 aa22.84■■□□□ 1.25
PCSK4-210ENST00000591201 YTHDC1Q96MU7 727 aaKnown RBP22.83■■□□□ 1.25
PCSK4-210ENST00000591201 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
PCSK4-210ENST00000591201 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
PCSK4-210ENST00000591201 NUP160Q12769 1436 aa22.82■■□□□ 1.24
PCSK4-210ENST00000591201 GTF3C3Q9Y5Q9 886 aa22.82■■□□□ 1.24
PCSK4-210ENST00000591201 CARMIL2Q6F5E8 1435 aa22.79■■□□□ 1.24
PCSK4-210ENST00000591201 TONSLQ96HA7 1378 aa22.79■■□□□ 1.24
PCSK4-210ENST00000591201 PPP1R15AO75807 674 aaPredicted RBP22.79■■□□□ 1.24
PCSK4-210ENST00000591201 ROCK1Q13464 1354 aa22.76■■□□□ 1.23
PCSK4-210ENST00000591201 TROQ12816 1431 aaPredicted RBP22.74■■□□□ 1.23
PCSK4-210ENST00000591201 DNMT1P26358 1616 aaKnown RBP22.73■■□□□ 1.23
PCSK4-210ENST00000591201 DAPK1P53355 1430 aa22.71■■□□□ 1.23
PCSK4-210ENST00000591201 ADCY10Q96PN6 1610 aa22.71■■□□□ 1.23
PCSK4-210ENST00000591201 RRP7BPQ9NSQ0 103 aa22.7■■□□□ 1.22
PCSK4-210ENST00000591201 ITSN2Q9NZM3 1697 aa22.7■■□□□ 1.22
PCSK4-210ENST00000591201 ARID3CA6NKF2 412 aa22.69■■□□□ 1.22
PCSK4-210ENST00000591201 CHIC2Q9UKJ5 165 aa22.68■■□□□ 1.22
PCSK4-210ENST00000591201 PLB1Q6P1J6 1458 aa22.65■■□□□ 1.22
PCSK4-210ENST00000591201 JPH4Q96JJ6 628 aa22.65■■□□□ 1.22
PCSK4-210ENST00000591201 ABCC5O15440 1437 aa22.65■■□□□ 1.22
PCSK4-210ENST00000591201 KDM6BO15054 1643 aa22.64■■□□□ 1.21
PCSK4-210ENST00000591201 ABCA8O94911 1581 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms