RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 RUSC2Q8N2Y8 1516 aa36.64■■■■□ 3.46
TMC6-213ENST00000589933 IGF1RP08069 1367 aa36.57■■■■□ 3.45
TMC6-213ENST00000589933 KIAA0586Q9BVV6 1533 aa36.49■■■■□ 3.43
TMC6-213ENST00000589933 NPM1P06748 294 aaKnown RBP eCLIP36.43■■■■□ 3.42
TMC6-213ENST00000589933 CARMIL1Q5VZK9 1371 aa36.4■■■■□ 3.42
TMC6-213ENST00000589933 KIF13AQ9H1H9 1805 aa36.32■■■■□ 3.41
TMC6-213ENST00000589933 CARMIL2Q6F5E8 1435 aa36.23■■■■□ 3.39
TMC6-213ENST00000589933 ADCY10Q96PN6 1610 aa36.23■■■■□ 3.39
TMC6-213ENST00000589933 MAPKBP1O60336 1514 aa36.21■■■■□ 3.39
TMC6-213ENST00000589933 IQGAP2Q13576 1575 aa36.19■■■■□ 3.38
TMC6-213ENST00000589933 PTPRGP23470 1445 aa36.17■■■■□ 3.38
TMC6-213ENST00000589933 FAM69CQ0P6D2 419 aa36.15■■■■□ 3.38
TMC6-213ENST00000589933 ABCC10Q5T3U5 1492 aa36.15■■■■□ 3.38
TMC6-213ENST00000589933 AEBP2Q6ZN18 517 aaPredicted RBP36.13■■■■□ 3.37
TMC6-213ENST00000589933 TNIKQ9UKE5 1360 aa36.11■■■■□ 3.37
TMC6-213ENST00000589933 RAPGEF2Q9Y4G8 1499 aa36.11■■■■□ 3.37
TMC6-213ENST00000589933 TTBK1Q5TCY1 1321 aaPredicted RBP36.08■■■■□ 3.37
TMC6-213ENST00000589933 DIP2BQ9P265 1576 aa36.06■■■■□ 3.36
TMC6-213ENST00000589933 ABCC2Q92887 1545 aa35.93■■■■□ 3.34
TMC6-213ENST00000589933 TSPOAP1O95153 1857 aa35.92■■■■□ 3.34
TMC6-213ENST00000589933 UGGT2Q9NYU1 1516 aa35.91■■■■□ 3.34
TMC6-213ENST00000589933 DISP1Q96F81 1524 aa35.9■■■■□ 3.34
TMC6-213ENST00000589933 UHRF1BP1LA0JNW5 1464 aa35.88■■■■□ 3.33
TMC6-213ENST00000589933 UACAQ9BZF9 1416 aa35.88■■■■□ 3.33
TMC6-213ENST00000589933 CTTNBP2Q8WZ74 1663 aa35.88■■■■□ 3.33
TMC6-213ENST00000589933 PLB1Q6P1J6 1458 aa35.83■■■■□ 3.33
TMC6-213ENST00000589933 KIAA0556O60303 1618 aa35.83■■■■□ 3.33
TMC6-213ENST00000589933 KDM6BO15054 1643 aa35.79■■■■□ 3.32
TMC6-213ENST00000589933 ASXL2Q76L83 1435 aa35.79■■■■□ 3.32
TMC6-213ENST00000589933 GOLGA3Q08378 1498 aa35.74■■■■□ 3.31
TMC6-213ENST00000589933 GLI2P10070 1586 aa35.71■■■■□ 3.31
TMC6-213ENST00000589933 KDM5BQ9UGL1 1544 aa35.7■■■■□ 3.31
TMC6-213ENST00000589933 PRXQ9BXM0 1461 aa35.67■■■■□ 3.3
TMC6-213ENST00000589933 ZCCHC11Q5TAX3 1644 aaKnown RBP35.66■■■■□ 3.3
TMC6-213ENST00000589933 FAM9AQ8IZU1 332 aaPredicted RBP35.65■■■■□ 3.3
TMC6-213ENST00000589933 EPRSP07814 1512 aaKnown RBP35.57■■■■□ 3.28
TMC6-213ENST00000589933 PPRC1Q5VV67 1664 aaKnown RBP35.54■■■■□ 3.28
TMC6-213ENST00000589933 MAP3K4Q9Y6R4 1608 aa35.51■■■■□ 3.28
TMC6-213ENST00000589933 TEX14Q8IWB6 1497 aa35.5■■■■□ 3.27
TMC6-213ENST00000589933 CSRNP3Q8WYN3 585 aa35.5■■■■□ 3.27
TMC6-213ENST00000589933 WDR7Q9Y4E6 1490 aa35.48■■■■□ 3.27
TMC6-213ENST00000589933 ABCA8O94911 1581 aa35.47■■■■□ 3.27
TMC6-213ENST00000589933 EEA1Q15075 1411 aa35.43■■■■□ 3.26
TMC6-213ENST00000589933 CFAP43Q8NDM7 1665 aa35.33■■■■□ 3.25
TMC6-213ENST00000589933 P3H3Q8IVL6 736 aa35.33■■■■□ 3.25
TMC6-213ENST00000589933 KCNH8Q96L42 1107 aa35.32■■■■□ 3.24
TMC6-213ENST00000589933 CD109Q6YHK3 1445 aa35.27■■■■□ 3.24
TMC6-213ENST00000589933 SAMD9Q5K651 1589 aa35.26■■■■□ 3.24
TMC6-213ENST00000589933 KDM4FA0A1W2PPD8 638 aa35.26■■■■□ 3.24
TMC6-213ENST00000589933 MAGI3Q5TCQ9 1506 aa35.22■■■■□ 3.23
TMC6-213ENST00000589933 COL17A1Q9UMD9 1497 aaPredicted RBP35.22■■■■□ 3.23
TMC6-213ENST00000589933 ARID3CA6NKF2 412 aa35.17■■■■□ 3.22
TMC6-213ENST00000589933 RAPGEF6Q8TEU7 1601 aa35.17■■■■□ 3.22
TMC6-213ENST00000589933 ATP10BO94823 1461 aa35.16■■■■□ 3.22
TMC6-213ENST00000589933 RANGAP1P46060 587 aaPredicted RBP35.12■■■■□ 3.21
TMC6-213ENST00000589933 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.11■■■■□ 3.21
TMC6-213ENST00000589933 HNRNPUL2Q1KMD3 747 aaKnown RBP35.11■■■■□ 3.21
TMC6-213ENST00000589933 KIF21BO75037 1637 aa35.09■■■■□ 3.21
TMC6-213ENST00000589933 ADGRL1O94910 1474 aa35.08■■■■□ 3.21
TMC6-213ENST00000589933 ABCA9Q8IUA7 1624 aa35.02■■■■□ 3.2
TMC6-213ENST00000589933 FHOD3Q2V2M9 1422 aa35■■■■□ 3.19
TMC6-213ENST00000589933 EFCAB5A4FU69 1503 aa35■■■■□ 3.19
TMC6-213ENST00000589933 PHLDB1Q86UU1 1377 aa34.99■■■■□ 3.19
TMC6-213ENST00000589933 NUP153P49790 1475 aaKnown RBP34.95■■■■□ 3.19
TMC6-213ENST00000589933 ARAP3Q8WWN8 1544 aa34.95■■■■□ 3.19
TMC6-213ENST00000589933 PLEKHD1A6NEE1 506 aa34.9■■■■□ 3.18
TMC6-213ENST00000589933 UBTFP17480 764 aaKnown RBP34.88■■■■□ 3.17
TMC6-213ENST00000589933 NEO1Q92859 1461 aa34.85■■■■□ 3.17
TMC6-213ENST00000589933 CHIC1Q5VXU3 224 aa34.84■■■■□ 3.17
TMC6-213ENST00000589933 EHMT2Q96KQ7 1210 aa34.77■■■■□ 3.16
TMC6-213ENST00000589933 CFAP74Q9C0B2 1584 aa34.71■■■■□ 3.15
TMC6-213ENST00000589933 FMN1Q68DA7 1419 aa34.71■■■■□ 3.15
TMC6-213ENST00000589933 RAPGEF3O95398 923 aa34.7■■■■□ 3.15
TMC6-213ENST00000589933 ATP1B4Q9UN42 357 aaPredicted RBP34.66■■■■□ 3.14
TMC6-213ENST00000589933 HECW1Q76N89 1606 aa34.65■■■■□ 3.14
TMC6-213ENST00000589933 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.65■■■■□ 3.142e-6■□□□□ 8.9
TMC6-213ENST00000589933 FANCAO15360 1455 aa34.62■■■■□ 3.13
TMC6-213ENST00000589933 CDK13Q14004 1512 aaKnown RBP34.61■■■■□ 3.13
TMC6-213ENST00000589933 DENND4BO75064 1496 aaPredicted RBP34.61■■■■□ 3.13
TMC6-213ENST00000589933 CDK11AQ9UQ88 783 aaPredicted RBP34.61■■■■□ 3.13
TMC6-213ENST00000589933 AKNAQ7Z591 1439 aa34.6■■■■□ 3.13
TMC6-213ENST00000589933 ARHGAP35Q9NRY4 1499 aa34.59■■■■□ 3.13
TMC6-213ENST00000589933 TTC37Q6PGP7 1564 aa34.58■■■■□ 3.13
TMC6-213ENST00000589933 FRMPD1Q5SYB0 1578 aa34.57■■■■□ 3.13
TMC6-213ENST00000589933 HECW2Q9P2P5 1572 aa34.57■■■■□ 3.12
TMC6-213ENST00000589933 RICTORQ6R327 1708 aa34.55■■■■□ 3.12
TMC6-213ENST00000589933 ARID4BQ4LE39 1312 aaPredicted RBP34.55■■■■□ 3.12
TMC6-213ENST00000589933 ADAMTSL3P82987 1691 aa34.5■■■■□ 3.11
TMC6-213ENST00000589933 ARHGEF40Q8TER5 1519 aa34.48■■■■□ 3.11
TMC6-213ENST00000589933 BCORL1Q5H9F3 1711 aa34.47■■■■□ 3.11
TMC6-213ENST00000589933 MYO5CQ9NQX4 1742 aa34.47■■■■□ 3.11
TMC6-213ENST00000589933 PLCH2O75038 1416 aa34.46■■■■□ 3.11
TMC6-213ENST00000589933 CLIP1P30622 1438 aa34.42■■■■□ 3.1
TMC6-213ENST00000589933 KIF14Q15058 1648 aa34.41■■■■□ 3.1
TMC6-213ENST00000589933 ZMYM4Q5VZL5 1548 aa34.41■■■■□ 3.1
TMC6-213ENST00000589933 PTPRMP28827 1452 aa34.4■■■■□ 3.1
TMC6-213ENST00000589933 EFCAB2Q5VUJ9 269 aa34.39■■■■□ 3.1
TMC6-213ENST00000589933 MAGI2Q86UL8 1455 aa34.39■■■■□ 3.1
TMC6-213ENST00000589933 ZFYVE16Q7Z3T8 1539 aa34.38■■■■□ 3.09
TMC6-213ENST00000589933 TROQ12816 1431 aaPredicted RBP34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms