RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 NISCHQ9Y2I1 1504 aa52.39■■■■■ 5.98
TMC6-213ENST00000589933 CCDC180Q9P1Z9 1646 aa47.07■■■■■ 5.13
TMC6-213ENST00000589933 ABCC9O60706 1549 aa46.82■■■■■ 5.09
TMC6-213ENST00000589933 RB1CC1Q8TDY2 1594 aa44.73■■■■■ 4.75
TMC6-213ENST00000589933 NACADO15069 1562 aa44.44■■■■■ 4.71
TMC6-213ENST00000589933 DCAF8L2P0C7V8 631 aa44.26■■■■■ 4.68
TMC6-213ENST00000589933 MYO15BQ96JP2 1530 aa43.85■■■■■ 4.61
TMC6-213ENST00000589933 UNC13AQ9UPW8 1703 aa43.68■■■■■ 4.58
TMC6-213ENST00000589933 DNAJC5BQ9UF47 199 aa43.65■■■■■ 4.58
TMC6-213ENST00000589933 PABPN1Q86U42 306 aaKnown RBP eCLIP43.58■■■■■ 4.571e-8■□□□□ 10.7
TMC6-213ENST00000589933 ZCCHC6Q5VYS8 1495 aaKnown RBP43.43■■■■■ 4.54
TMC6-213ENST00000589933 DCAF1Q9Y4B6 1507 aa43.32■■■■■ 4.53
TMC6-213ENST00000589933 BICRAQ9NZM4 1560 aa43.26■■■■■ 4.52
TMC6-213ENST00000589933 SHROOM4Q9ULL8 1493 aa42.87■■■■■ 4.45
TMC6-213ENST00000589933 SCRIBQ14160 1630 aa42.82■■■■■ 4.44
TMC6-213ENST00000589933 CC2D2AQ9P2K1 1620 aa42.33■■■■■ 4.37
TMC6-213ENST00000589933 EIF4G1Q04637 1599 aaKnown RBP42.27■■■■■ 4.36
TMC6-213ENST00000589933 CECR2Q9BXF3 1484 aa42.19■■■■■ 4.34
TMC6-213ENST00000589933 NCAPD3P42695 1498 aa40.96■■■■■ 4.15
TMC6-213ENST00000589933 SMARCA4P51532 1647 aa40.87■■■■■ 4.13
TMC6-213ENST00000589933 SMARCA2P51531 1590 aa40.84■■■■■ 4.13
TMC6-213ENST00000589933 ATAD2BQ9ULI0 1458 aa40.83■■■■■ 4.13
TMC6-213ENST00000589933 BAZ1AQ9NRL2 1556 aaPredicted RBP40.74■■■■■ 4.11
TMC6-213ENST00000589933 HMGXB3Q12766 1538 aa40.71■■■■■ 4.11
TMC6-213ENST00000589933 ERCC6Q03468 1493 aa40.52■■■■■ 4.08
TMC6-213ENST00000589933 BAZ1BQ9UIG0 1483 aaKnown RBP40.52■■■■■ 4.08
TMC6-213ENST00000589933 PEG3Q9GZU2 1588 aa40.45■■■■■ 4.07
TMC6-213ENST00000589933 CUX2O14529 1486 aa40.38■■■■■ 4.05
TMC6-213ENST00000589933 MROH2BQ7Z745 1585 aa40.32■■■■■ 4.05
TMC6-213ENST00000589933 NESP48681 1621 aa40.2■■■■■ 4.03
TMC6-213ENST00000589933 DNAJC5Q9H3Z4 198 aa40.14■■■■■ 4.02
TMC6-213ENST00000589933 LAMC3Q9Y6N6 1575 aa40.1■■■■■ 4.01
TMC6-213ENST00000589933 WIZO95785 1651 aa39.89■■■■□ 3.98
TMC6-213ENST00000589933 PDS5BQ9NTI5 1447 aa39.87■■■■□ 3.97
TMC6-213ENST00000589933 THOC2Q8NI27 1593 aaKnown RBP39.82■■■■□ 3.97
TMC6-213ENST00000589933 KIF21AQ7Z4S6 1674 aa39.8■■■■□ 3.96
TMC6-213ENST00000589933 CADPSQ9ULU8 1353 aa39.74■■■■□ 3.95
TMC6-213ENST00000589933 RSF1Q96T23 1441 aaPredicted RBP39.54■■■■□ 3.92
TMC6-213ENST00000589933 MRC2Q9UBG0 1479 aa39.47■■■■□ 3.91
TMC6-213ENST00000589933 TOP2AP11388 1531 aaKnown RBP39.43■■■■□ 3.9
TMC6-213ENST00000589933 CEP164Q9UPV0 1460 aa39.36■■■■□ 3.89
TMC6-213ENST00000589933 WDR62O43379 1518 aa39.34■■■■□ 3.89
TMC6-213ENST00000589933 CFTRP13569 1480 aa39.29■■■■□ 3.88
TMC6-213ENST00000589933 FANCD2Q9BXW9 1451 aa39.29■■■■□ 3.88
TMC6-213ENST00000589933 PRDM2Q13029 1718 aa39.07■■■■□ 3.85
TMC6-213ENST00000589933 CCDC88BA6NC98 1476 aa38.93■■■■□ 3.82
TMC6-213ENST00000589933 URB2Q14146 1524 aaKnown RBP38.89■■■■□ 3.82
TMC6-213ENST00000589933 ABCC8Q09428 1581 aa38.61■■■■□ 3.77
TMC6-213ENST00000589933 OSCARQ8IYS5 282 aa38.59■■■■□ 3.77
TMC6-213ENST00000589933 IFT140Q96RY7 1462 aa38.56■■■■□ 3.76
TMC6-213ENST00000589933 TOPBP1Q92547 1522 aa38.55■■■■□ 3.76
TMC6-213ENST00000589933 TRIM41Q8WV44 630 aa38.48■■■■□ 3.75
TMC6-213ENST00000589933 DNMBPQ6XZF7 1577 aa38.46■■■■□ 3.75
TMC6-213ENST00000589933 ZNF608Q9ULD9 1512 aaPredicted RBP38.38■■■■□ 3.73
TMC6-213ENST00000589933 EIF4G3O43432 1585 aaKnown RBP38.25■■■■□ 3.71
TMC6-213ENST00000589933 TARBP1Q13395 1621 aaKnown RBP38.17■■■■□ 3.7
TMC6-213ENST00000589933 POLA1P09884 1462 aaPredicted RBP38.14■■■■□ 3.7
TMC6-213ENST00000589933 AQRO60306 1485 aaKnown RBP eCLIP38.08■■■■□ 3.695e-10■■■■□ 21.7
TMC6-213ENST00000589933 SOGA1O94964 1423 aa38.03■■■■□ 3.68
TMC6-213ENST00000589933 RIMBP3CA6NJZ7 1639 aa38■■■■□ 3.67
TMC6-213ENST00000589933 RIMBP3BA6NNM3 1639 aa38■■■■□ 3.67
TMC6-213ENST00000589933 RIMBP3Q9UFD9 1639 aa38■■■■□ 3.67
TMC6-213ENST00000589933 CHD1O14646 1710 aa38■■■■□ 3.67
TMC6-213ENST00000589933 SUPT5HO00267 1087 aaKnown RBP37.98■■■■□ 3.67
TMC6-213ENST00000589933 RAD54L2Q9Y4B4 1467 aa37.97■■■■□ 3.67
TMC6-213ENST00000589933 FGD5Q6ZNL6 1462 aa37.95■■■■□ 3.67
TMC6-213ENST00000589933 WDR97A6NE52 1622 aa37.93■■■■□ 3.66
TMC6-213ENST00000589933 FBLN2P98095 1184 aa37.92■■■■□ 3.66
TMC6-213ENST00000589933 CUX1P39880 1505 aa37.89■■■■□ 3.66
TMC6-213ENST00000589933 ARHGEF11O15085 1522 aa37.88■■■■□ 3.65
TMC6-213ENST00000589933 TDRD9Q8NDG6 1382 aaKnown RBP37.88■■■■□ 3.65
TMC6-213ENST00000589933 SNAPC4Q5SXM2 1469 aa37.72■■■■□ 3.63
TMC6-213ENST00000589933 GRIN2BQ13224 1484 aa37.7■■■■□ 3.63
TMC6-213ENST00000589933 MAGI1Q96QZ7 1491 aaPredicted RBP37.7■■■■□ 3.63
TMC6-213ENST00000589933 CHMP7Q8WUX9 453 aaPredicted RBP37.68■■■■□ 3.62
TMC6-213ENST00000589933 CYB5RLQ6IPT4 315 aa37.62■■■■□ 3.61
TMC6-213ENST00000589933 SYNJ1O43426 1573 aa37.59■■■■□ 3.61
TMC6-213ENST00000589933 PBRM1Q86U86 1689 aa37.59■■■■□ 3.61
TMC6-213ENST00000589933 GAPVD1Q14C86 1478 aa37.57■■■■□ 3.6
TMC6-213ENST00000589933 SYNJ2O15056 1496 aa37.54■■■■□ 3.6
TMC6-213ENST00000589933 ABCA10Q8WWZ4 1543 aa37.54■■■■□ 3.6
TMC6-213ENST00000589933 CLASP1Q7Z460 1538 aa37.47■■■■□ 3.59
TMC6-213ENST00000589933 ARAP1Q96P48 1450 aa37.47■■■■□ 3.59
TMC6-213ENST00000589933 WRNQ14191 1432 aaPredicted RBP eCLIP37.45■■■■□ 3.59
TMC6-213ENST00000589933 ABCA5Q8WWZ7 1642 aa37.45■■■■□ 3.59
TMC6-213ENST00000589933 BIVM-ERCC5R4GMW8 1640 aa37.4■■■■□ 3.58
TMC6-213ENST00000589933 TOP2BQ02880 1626 aa37.39■■■■□ 3.58
TMC6-213ENST00000589933 TRHP20396 242 aaPredicted RBP37.25■■■■□ 3.55
TMC6-213ENST00000589933 GRIN2AQ12879 1464 aa37.18■■■■□ 3.54
TMC6-213ENST00000589933 ADAMTS12P58397 1594 aa37.17■■■■□ 3.54
TMC6-213ENST00000589933 FHAD1B1AJZ9 1412 aa37.1■■■■□ 3.53
TMC6-213ENST00000589933 ERICH3Q5RHP9 1530 aa37.1■■■■□ 3.53
TMC6-213ENST00000589933 NUP160Q12769 1436 aa37.02■■■■□ 3.52
TMC6-213ENST00000589933 CEP170Q5SW79 1584 aa37■■■■□ 3.51
TMC6-213ENST00000589933 SHROOM2Q13796 1616 aa36.87■■■■□ 3.49
TMC6-213ENST00000589933 ERCC6L2Q5T890 1561 aa36.83■■■■□ 3.49
TMC6-213ENST00000589933 KIF27Q86VH2 1401 aa36.71■■■■□ 3.47
TMC6-213ENST00000589933 JPH4Q96JJ6 628 aa36.7■■■■□ 3.47
TMC6-213ENST00000589933 PRG4Q92954 1404 aaPredicted RBP36.69■■■■□ 3.46
TMC6-213ENST00000589933 CUL7Q14999 1698 aa36.65■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms