RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 RUSC2Q8N2Y8 1516 aa28.48■■■□□ 2.15
MBD3-206ENST00000589901 KIAA0586Q9BVV6 1533 aa28.38■■■□□ 2.13
MBD3-206ENST00000589901 CUL7Q14999 1698 aa28.35■■■□□ 2.13
MBD3-206ENST00000589901 CARMIL1Q5VZK9 1371 aa28.31■■■□□ 2.12
MBD3-206ENST00000589901 NPM1P06748 294 aaKnown RBP eCLIP28.25■■■□□ 2.11
MBD3-206ENST00000589901 ADCY10Q96PN6 1610 aa28.21■■■□□ 2.11
MBD3-206ENST00000589901 KIF13AQ9H1H9 1805 aa28.2■■■□□ 2.11
MBD3-206ENST00000589901 FAM69CQ0P6D2 419 aa28.18■■■□□ 2.1
MBD3-206ENST00000589901 ABCC10Q5T3U5 1492 aa28.16■■■□□ 2.1
MBD3-206ENST00000589901 MAPKBP1O60336 1514 aa28.16■■■□□ 2.1
MBD3-206ENST00000589901 TTBK1Q5TCY1 1321 aaPredicted RBP28.14■■■□□ 2.09
MBD3-206ENST00000589901 PTPRGP23470 1445 aa28.13■■■□□ 2.09
MBD3-206ENST00000589901 AEBP2Q6ZN18 517 aaPredicted RBP28.12■■■□□ 2.09
MBD3-206ENST00000589901 CARMIL2Q6F5E8 1435 aa28.09■■■□□ 2.09
MBD3-206ENST00000589901 IQGAP2Q13576 1575 aa28.07■■■□□ 2.08
MBD3-206ENST00000589901 TNIKQ9UKE5 1360 aa28.07■■■□□ 2.08
MBD3-206ENST00000589901 DIP2BQ9P265 1576 aa28.07■■■□□ 2.08
MBD3-206ENST00000589901 RAPGEF2Q9Y4G8 1499 aa28.03■■■□□ 2.08
MBD3-206ENST00000589901 DISP1Q96F81 1524 aa27.98■■■□□ 2.07
MBD3-206ENST00000589901 ABCC2Q92887 1545 aa27.96■■■□□ 2.07
MBD3-206ENST00000589901 UGGT2Q9NYU1 1516 aa27.91■■■□□ 2.06
MBD3-206ENST00000589901 UACAQ9BZF9 1416 aa27.91■■■□□ 2.06
MBD3-206ENST00000589901 UHRF1BP1LA0JNW5 1464 aa27.89■■■□□ 2.06
MBD3-206ENST00000589901 ASXL2Q76L83 1435 aa27.88■■■□□ 2.05
MBD3-206ENST00000589901 PLB1Q6P1J6 1458 aa27.83■■■□□ 2.05
MBD3-206ENST00000589901 TSPOAP1O95153 1857 aa27.83■■■□□ 2.04
MBD3-206ENST00000589901 KIAA0556O60303 1618 aa27.82■■■□□ 2.04
MBD3-206ENST00000589901 KDM6BO15054 1643 aa27.81■■■□□ 2.04
MBD3-206ENST00000589901 KDM5BQ9UGL1 1544 aa27.78■■■□□ 2.04
MBD3-206ENST00000589901 PRXQ9BXM0 1461 aa27.76■■■□□ 2.03
MBD3-206ENST00000589901 GLI2P10070 1586 aa27.75■■■□□ 2.03
MBD3-206ENST00000589901 CTTNBP2Q8WZ74 1663 aa27.72■■■□□ 2.03
MBD3-206ENST00000589901 EPRSP07814 1512 aaKnown RBP27.7■■■□□ 2.02
MBD3-206ENST00000589901 ZCCHC11Q5TAX3 1644 aaKnown RBP27.69■■■□□ 2.02
MBD3-206ENST00000589901 GOLGA3Q08378 1498 aa27.67■■■□□ 2.02
MBD3-206ENST00000589901 PPRC1Q5VV67 1664 aaKnown RBP27.67■■■□□ 2.02
MBD3-206ENST00000589901 KDM4FA0A1W2PPD8 638 aa27.62■■■□□ 2.01
MBD3-206ENST00000589901 WDR7Q9Y4E6 1490 aa27.59■■■□□ 2.01
MBD3-206ENST00000589901 MAP3K4Q9Y6R4 1608 aa27.59■■■□□ 2.01
MBD3-206ENST00000589901 ABCA8O94911 1581 aa27.58■■■□□ 2.01
MBD3-206ENST00000589901 COL17A1Q9UMD9 1497 aaPredicted RBP27.57■■■□□ 2
MBD3-206ENST00000589901 CSRNP3Q8WYN3 585 aa27.57■■■□□ 2
MBD3-206ENST00000589901 P3H3Q8IVL6 736 aa27.54■■■□□ 2
MBD3-206ENST00000589901 TEX14Q8IWB6 1497 aa27.52■■■□□ 2
MBD3-206ENST00000589901 KCNH8Q96L42 1107 aa27.51■■□□□ 1.99
MBD3-206ENST00000589901 ARID3CA6NKF2 412 aa27.46■■□□□ 1.99
MBD3-206ENST00000589901 CD109Q6YHK3 1445 aa27.44■■□□□ 1.98
MBD3-206ENST00000589901 FAM9AQ8IZU1 332 aaPredicted RBP27.42■■□□□ 1.98
MBD3-206ENST00000589901 MAGI3Q5TCQ9 1506 aa27.39■■□□□ 1.98
MBD3-206ENST00000589901 EEA1Q15075 1411 aa27.39■■□□□ 1.97
MBD3-206ENST00000589901 ATP10BO94823 1461 aa27.38■■□□□ 1.97
MBD3-206ENST00000589901 SAMD9Q5K651 1589 aa27.37■■□□□ 1.97
MBD3-206ENST00000589901 RANGAP1P46060 587 aaPredicted RBP27.36■■□□□ 1.97
MBD3-206ENST00000589901 ADGRL1O94910 1474 aa27.36■■□□□ 1.97
MBD3-206ENST00000589901 CFAP43Q8NDM7 1665 aa27.36■■□□□ 1.97
MBD3-206ENST00000589901 RAPGEF6Q8TEU7 1601 aa27.27■■□□□ 1.96
MBD3-206ENST00000589901 FHOD3Q2V2M9 1422 aa27.26■■□□□ 1.95
MBD3-206ENST00000589901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.25■■□□□ 1.95
MBD3-206ENST00000589901 HNRNPUL2Q1KMD3 747 aaKnown RBP27.25■■□□□ 1.95
MBD3-206ENST00000589901 NUP153P49790 1475 aaKnown RBP27.22■■□□□ 1.95
MBD3-206ENST00000589901 ABCA9Q8IUA7 1624 aa27.19■■□□□ 1.94
MBD3-206ENST00000589901 ARAP3Q8WWN8 1544 aa27.18■■□□□ 1.94
MBD3-206ENST00000589901 KIF21BO75037 1637 aa27.16■■□□□ 1.94
MBD3-206ENST00000589901 EHMT2Q96KQ7 1210 aa27.13■■□□□ 1.93
MBD3-206ENST00000589901 PHLDB1Q86UU1 1377 aa27.1■■□□□ 1.93
MBD3-206ENST00000589901 RAPGEF3O95398 923 aa27.09■■□□□ 1.93
MBD3-206ENST00000589901 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
MBD3-206ENST00000589901 EFCAB5A4FU69 1503 aa27.09■■□□□ 1.93
MBD3-206ENST00000589901 PLEKHD1A6NEE1 506 aa27.08■■□□□ 1.93
MBD3-206ENST00000589901 NEO1Q92859 1461 aa27.06■■□□□ 1.92
MBD3-206ENST00000589901 UBTFP17480 764 aaKnown RBP27.04■■□□□ 1.92
MBD3-206ENST00000589901 HECW2Q9P2P5 1572 aa26.96■■□□□ 1.91
MBD3-206ENST00000589901 CDK13Q14004 1512 aaKnown RBP26.95■■□□□ 1.91
MBD3-206ENST00000589901 FRMPD1Q5SYB0 1578 aa26.95■■□□□ 1.9
MBD3-206ENST00000589901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.95■■□□□ 1.9
MBD3-206ENST00000589901 ATP1B4Q9UN42 357 aaPredicted RBP26.92■■□□□ 1.9
MBD3-206ENST00000589901 ARHGAP35Q9NRY4 1499 aa26.92■■□□□ 1.9
MBD3-206ENST00000589901 AKNAQ7Z591 1439 aa26.91■■□□□ 1.9
MBD3-206ENST00000589901 FANCAO15360 1455 aa26.91■■□□□ 1.9
MBD3-206ENST00000589901 TTC37Q6PGP7 1564 aa26.9■■□□□ 1.9
MBD3-206ENST00000589901 DENND4BO75064 1496 aaPredicted RBP26.89■■□□□ 1.9
MBD3-206ENST00000589901 FMN1Q68DA7 1419 aa26.89■■□□□ 1.89
MBD3-206ENST00000589901 ARID4BQ4LE39 1312 aaPredicted RBP26.86■■□□□ 1.89
MBD3-206ENST00000589901 ADAMTSL3P82987 1691 aa26.83■■□□□ 1.89
MBD3-206ENST00000589901 CFAP74Q9C0B2 1584 aa26.82■■□□□ 1.88
MBD3-206ENST00000589901 PTPRMP28827 1452 aa26.81■■□□□ 1.88
MBD3-206ENST00000589901 HECW1Q76N89 1606 aa26.81■■□□□ 1.88
MBD3-206ENST00000589901 RICTORQ6R327 1708 aa26.81■■□□□ 1.88
MBD3-206ENST00000589901 PLCH2O75038 1416 aa26.8■■□□□ 1.88
MBD3-206ENST00000589901 ARHGEF40Q8TER5 1519 aa26.8■■□□□ 1.88
MBD3-206ENST00000589901 BCORL1Q5H9F3 1711 aa26.76■■□□□ 1.88
MBD3-206ENST00000589901 ILDR1Q86SU0 546 aaPredicted RBP26.76■■□□□ 1.87
MBD3-206ENST00000589901 CDK11AQ9UQ88 783 aaPredicted RBP26.76■■□□□ 1.87
MBD3-206ENST00000589901 SCAPERQ9BY12 1400 aa26.74■■□□□ 1.87
MBD3-206ENST00000589901 YEATS2Q9ULM3 1422 aa26.74■■□□□ 1.87
MBD3-206ENST00000589901 ZMYM4Q5VZL5 1548 aa26.74■■□□□ 1.87
MBD3-206ENST00000589901 MADDQ8WXG6 1647 aa26.72■■□□□ 1.87
MBD3-206ENST00000589901 ZFYVE16Q7Z3T8 1539 aa26.7■■□□□ 1.87
MBD3-206ENST00000589901 EFCAB2Q5VUJ9 269 aa26.7■■□□□ 1.86
MBD3-206ENST00000589901 TROQ12816 1431 aaPredicted RBP26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms