RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-215	ENST00000589883	IGF1R	P08069	1367 aa		33.24	■■■□□ 2.91
PTBP1-215	ENST00000589883	CUL7	Q14999	1698 aa		33.22	■■■□□ 2.91
PTBP1-215	ENST00000589883	KIAA0586	Q9BVV6	1533 aa		33.18	■■■□□ 2.9
PTBP1-215	ENST00000589883	NPM1	P06748	294 aa	Known RBP eCLIP	33.16	■■■□□ 2.9
PTBP1-215	ENST00000589883	CARMIL1	Q5VZK9	1371 aa		33.06	■■■□□ 2.88
PTBP1-215	ENST00000589883	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.05	■■■□□ 2.88
PTBP1-215	ENST00000589883	KIF13A	Q9H1H9	1805 aa		33.02	■■■□□ 2.88
PTBP1-215	ENST00000589883	MAPKBP1	O60336	1514 aa		32.98	■■■□□ 2.87
PTBP1-215	ENST00000589883	FAM69C	Q0P6D2	419 aa		32.96	■■■□□ 2.87
PTBP1-215	ENST00000589883	ABCC10	Q5T3U5	1492 aa		32.95	■■■□□ 2.87
PTBP1-215	ENST00000589883	ADCY10	Q96PN6	1610 aa		32.95	■■■□□ 2.86
PTBP1-215	ENST00000589883	CARMIL2	Q6F5E8	1435 aa		32.92	■■■□□ 2.86
PTBP1-215	ENST00000589883	PTPRG	P23470	1445 aa		32.9	■■■□□ 2.86
PTBP1-215	ENST00000589883	TNIK	Q9UKE5	1360 aa		32.83	■■■□□ 2.85
PTBP1-215	ENST00000589883	IQGAP2	Q13576	1575 aa		32.83	■■■□□ 2.85
PTBP1-215	ENST00000589883	DIP2B	Q9P265	1576 aa		32.83	■■■□□ 2.85
PTBP1-215	ENST00000589883	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.77	■■■□□ 2.84
PTBP1-215	ENST00000589883	RAPGEF2	Q9Y4G8	1499 aa		32.75	■■■□□ 2.83
PTBP1-215	ENST00000589883	ABCC2	Q92887	1545 aa		32.7	■■■□□ 2.83
PTBP1-215	ENST00000589883	UHRF1BP1L	A0JNW5	1464 aa		32.65	■■■□□ 2.82
PTBP1-215	ENST00000589883	UACA	Q9BZF9	1416 aa		32.64	■■■□□ 2.82
PTBP1-215	ENST00000589883	DISP1	Q96F81	1524 aa		32.63	■■■□□ 2.81
PTBP1-215	ENST00000589883	UGGT2	Q9NYU1	1516 aa		32.62	■■■□□ 2.81
PTBP1-215	ENST00000589883	PLB1	Q6P1J6	1458 aa		32.62	■■■□□ 2.81
PTBP1-215	ENST00000589883	CHIC1	Q5VXU3	224 aa		32.62	■■■□□ 2.81
PTBP1-215	ENST00000589883	TSPOAP1	O95153	1857 aa		32.61	■■■□□ 2.81
PTBP1-215	ENST00000589883	KDM6B	O15054	1643 aa		32.59	■■■□□ 2.81
PTBP1-215	ENST00000589883	ASXL2	Q76L83	1435 aa		32.58	■■■□□ 2.81
PTBP1-215	ENST00000589883	GLI2	P10070	1586 aa		32.51	■■■□□ 2.79
PTBP1-215	ENST00000589883	KIAA0556	O60303	1618 aa		32.51	■■■□□ 2.79
PTBP1-215	ENST00000589883	KDM5B	Q9UGL1	1544 aa		32.48	■■■□□ 2.79
PTBP1-215	ENST00000589883	CTTNBP2	Q8WZ74	1663 aa		32.46	■■■□□ 2.79
PTBP1-215	ENST00000589883	GOLGA3	Q08378	1498 aa		32.44	■■■□□ 2.78
PTBP1-215	ENST00000589883	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.37	■■■□□ 2.77
PTBP1-215	ENST00000589883	EPRS	P07814	1512 aa	Known RBP	32.37	■■■□□ 2.77
PTBP1-215	ENST00000589883	PRX	Q9BXM0	1461 aa		32.37	■■■□□ 2.77
PTBP1-215	ENST00000589883	FAM9A	Q8IZU1	332 aa	Predicted RBP	32.34	■■■□□ 2.77
PTBP1-215	ENST00000589883	PPRC1	Q5VV67	1664 aa	Known RBP	32.33	■■■□□ 2.77
PTBP1-215	ENST00000589883	TEX14	Q8IWB6	1497 aa		32.31	■■■□□ 2.76
PTBP1-215	ENST00000589883	MAP3K4	Q9Y6R4	1608 aa		32.29	■■■□□ 2.76
PTBP1-215	ENST00000589883	WDR7	Q9Y4E6	1490 aa		32.27	■■■□□ 2.76
PTBP1-215	ENST00000589883	KDM4F	A0A1W2PPD8	638 aa		32.23	■■■□□ 2.75
PTBP1-215	ENST00000589883	ABCA8	O94911	1581 aa		32.21	■■■□□ 2.75
PTBP1-215	ENST00000589883	CSRNP3	Q8WYN3	585 aa		32.17	■■■□□ 2.74
PTBP1-215	ENST00000589883	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.11	■■■□□ 2.73
PTBP1-215	ENST00000589883	KCNH8	Q96L42	1107 aa		32.11	■■■□□ 2.73
PTBP1-215	ENST00000589883	CD109	Q6YHK3	1445 aa		32.1	■■■□□ 2.73
PTBP1-215	ENST00000589883	EEA1	Q15075	1411 aa		32.09	■■■□□ 2.73
PTBP1-215	ENST00000589883	CFAP43	Q8NDM7	1665 aa		32.08	■■■□□ 2.73
PTBP1-215	ENST00000589883	MAGI3	Q5TCQ9	1506 aa		32.07	■■■□□ 2.72
PTBP1-215	ENST00000589883	P3H3	Q8IVL6	736 aa		32.05	■■■□□ 2.72
PTBP1-215	ENST00000589883	ADGRL1	O94910	1474 aa		32	■■■□□ 2.71
PTBP1-215	ENST00000589883	SAMD9	Q5K651	1589 aa		31.97	■■■□□ 2.71
PTBP1-215	ENST00000589883	ATP10B	O94823	1461 aa		31.96	■■■□□ 2.71
PTBP1-215	ENST00000589883	ARID3C	A6NKF2	412 aa		31.93	■■■□□ 2.7
PTBP1-215	ENST00000589883	RAPGEF6	Q8TEU7	1601 aa		31.88	■■■□□ 2.69
PTBP1-215	ENST00000589883	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.86	■■■□□ 2.69
PTBP1-215	ENST00000589883	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.86	■■■□□ 2.69
PTBP1-215	ENST00000589883	PHLDB1	Q86UU1	1377 aa		31.85	■■■□□ 2.69
PTBP1-215	ENST00000589883	ARAP3	Q8WWN8	1544 aa		31.82	■■■□□ 2.68
PTBP1-215	ENST00000589883	RANGAP1	P46060	587 aa	Predicted RBP	31.81	■■■□□ 2.68
PTBP1-215	ENST00000589883	ABCA9	Q8IUA7	1624 aa		31.81	■■■□□ 2.68
PTBP1-215	ENST00000589883	EHMT2	Q96KQ7	1210 aa		31.76	■■■□□ 2.67
PTBP1-215	ENST00000589883	FHOD3	Q2V2M9	1422 aa		31.75	■■■□□ 2.67
PTBP1-215	ENST00000589883	NUP153	P49790	1475 aa	Known RBP	31.74	■■■□□ 2.67
PTBP1-215	ENST00000589883	KIF21B	O75037	1637 aa		31.74	■■■□□ 2.67
PTBP1-215	ENST00000589883	EFCAB5	A4FU69	1503 aa		31.72	■■■□□ 2.67
PTBP1-215	ENST00000589883	NEO1	Q92859	1461 aa		31.71	■■■□□ 2.67
PTBP1-215	ENST00000589883	PLEKHD1	A6NEE1	506 aa		31.7	■■■□□ 2.67
PTBP1-215	ENST00000589883	RAPGEF3	O95398	923 aa		31.59	■■■□□ 2.65
PTBP1-215	ENST00000589883	UBTF	P17480	764 aa	Known RBP	31.57	■■■□□ 2.64
PTBP1-215	ENST00000589883	HECW2	Q9P2P5	1572 aa		31.55	■■■□□ 2.64
PTBP1-215	ENST00000589883	CFAP74	Q9C0B2	1584 aa		31.5	■■■□□ 2.63
PTBP1-215	ENST00000589883	DENND4B	O75064	1496 aa	Predicted RBP	31.48	■■■□□ 2.63
PTBP1-215	ENST00000589883	FMN1	Q68DA7	1419 aa		31.48	■■■□□ 2.63
PTBP1-215	ENST00000589883	AKNA	Q7Z591	1439 aa		31.47	■■■□□ 2.63
PTBP1-215	ENST00000589883	FANCA	O15360	1455 aa		31.46	■■■□□ 2.63
PTBP1-215	ENST00000589883	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.46	■■■□□ 2.63	2e-9	■■□□□ 13
PTBP1-215	ENST00000589883	FRMPD1	Q5SYB0	1578 aa		31.45	■■■□□ 2.63
PTBP1-215	ENST00000589883	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.44	■■■□□ 2.62
PTBP1-215	ENST00000589883	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.41	■■■□□ 2.62
PTBP1-215	ENST00000589883	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.41	■■■□□ 2.62
PTBP1-215	ENST00000589883	CDK13	Q14004	1512 aa	Known RBP	31.4	■■■□□ 2.62
PTBP1-215	ENST00000589883	ADAMTSL3	P82987	1691 aa		31.4	■■■□□ 2.62
PTBP1-215	ENST00000589883	TTC37	Q6PGP7	1564 aa		31.39	■■■□□ 2.61
PTBP1-215	ENST00000589883	HECW1	Q76N89	1606 aa		31.38	■■■□□ 2.61
PTBP1-215	ENST00000589883	PTPRM	P28827	1452 aa		31.37	■■■□□ 2.61
PTBP1-215	ENST00000589883	RICTOR	Q6R327	1708 aa		31.37	■■■□□ 2.61
PTBP1-215	ENST00000589883	ARHGEF40	Q8TER5	1519 aa		31.36	■■■□□ 2.61
PTBP1-215	ENST00000589883	ARHGAP35	Q9NRY4	1499 aa		31.35	■■■□□ 2.61
PTBP1-215	ENST00000589883	BCORL1	Q5H9F3	1711 aa		31.35	■■■□□ 2.61
PTBP1-215	ENST00000589883	LOC105371045	A0A1W2PR82	267 aa		31.34	■■■□□ 2.61
PTBP1-215	ENST00000589883	PLCH2	O75038	1416 aa		31.32	■■■□□ 2.6
PTBP1-215	ENST00000589883	MAGI2	Q86UL8	1455 aa		31.3	■■■□□ 2.6
PTBP1-215	ENST00000589883	ILDR1	Q86SU0	546 aa	Predicted RBP	31.3	■■■□□ 2.6
PTBP1-215	ENST00000589883	ZMYM4	Q5VZL5	1548 aa		31.29	■■■□□ 2.6
PTBP1-215	ENST00000589883	POGZ	Q7Z3K3	1410 aa		31.29	■■■□□ 2.6
PTBP1-215	ENST00000589883	EFCAB2	Q5VUJ9	269 aa		31.26	■■■□□ 2.59
PTBP1-215	ENST00000589883	ZFYVE16	Q7Z3T8	1539 aa		31.25	■■■□□ 2.59
PTBP1-215	ENST00000589883	MADD	Q8WXG6	1647 aa		31.25	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms