RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CCNB3Q8WWL7 1395 aa28.52■■■□□ 2.16
PRKCSH-209ENST00000589838 CLSPNQ9HAW4 1339 aa28.5■■■□□ 2.15
PRKCSH-209ENST00000589838 DNAJC5BQ9UF47 199 aa28.5■■■□□ 2.15
PRKCSH-209ENST00000589838 CFAP43Q8NDM7 1665 aa28.48■■■□□ 2.15
PRKCSH-209ENST00000589838 LRRC9Q6ZRR7 1453 aa28.47■■■□□ 2.15
PRKCSH-209ENST00000589838 TDRD9Q8NDG6 1382 aaKnown RBP28.47■■■□□ 2.15
PRKCSH-209ENST00000589838 AQRO60306 1485 aaKnown RBP eCLIP28.46■■■□□ 2.151e-6■■■□□ 18.9
PRKCSH-209ENST00000589838 PCF11O94913 1555 aaKnown RBP28.45■■■□□ 2.14
PRKCSH-209ENST00000589838 FYCO1Q9BQS8 1478 aa28.44■■■□□ 2.14
PRKCSH-209ENST00000589838 TARBP1Q13395 1621 aaKnown RBP28.43■■■□□ 2.14
PRKCSH-209ENST00000589838 FHOD3Q2V2M9 1422 aa28.4■■■□□ 2.14
PRKCSH-209ENST00000589838 CASKIN1Q8WXD9 1431 aa28.4■■■□□ 2.14
PRKCSH-209ENST00000589838 ZNF316A6NFI3 1004 aaPredicted RBP28.4■■■□□ 2.14
PRKCSH-209ENST00000589838 DIEXFQ68CQ4 756 aaKnown RBP28.4■■■□□ 2.14
PRKCSH-209ENST00000589838 P3H3Q8IVL6 736 aa28.4■■■□□ 2.14
PRKCSH-209ENST00000589838 FMN1Q68DA7 1419 aa28.38■■■□□ 2.13
PRKCSH-209ENST00000589838 MRC2Q9UBG0 1479 aa28.35■■■□□ 2.13
PRKCSH-209ENST00000589838 DHX57Q6P158 1386 aaKnown RBP28.35■■■□□ 2.13
PRKCSH-209ENST00000589838 SAMD9Q5K651 1589 aa28.32■■■□□ 2.12
PRKCSH-209ENST00000589838 PBRM1Q86U86 1689 aa28.29■■■□□ 2.12
PRKCSH-209ENST00000589838 ATP1B4Q9UN42 357 aaPredicted RBP28.29■■■□□ 2.12
PRKCSH-209ENST00000589838 PHLDB1Q86UU1 1377 aa28.25■■■□□ 2.11
PRKCSH-209ENST00000589838 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
PRKCSH-209ENST00000589838 ITGAEP38570 1179 aa28.19■■■□□ 2.1
PRKCSH-209ENST00000589838 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.18■■■□□ 2.1
PRKCSH-209ENST00000589838 THOC2Q8NI27 1593 aaKnown RBP28.18■■■□□ 2.1
PRKCSH-209ENST00000589838 IFT140Q96RY7 1462 aa28.16■■■□□ 2.1
PRKCSH-209ENST00000589838 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
PRKCSH-209ENST00000589838 GRIN2BQ13224 1484 aa28.16■■■□□ 2.1
PRKCSH-209ENST00000589838 WDR62O43379 1518 aa28.14■■■□□ 2.09
PRKCSH-209ENST00000589838 SETD5Q9C0A6 1442 aa28.13■■■□□ 2.09
PRKCSH-209ENST00000589838 RAB3GAP2Q9H2M9 1393 aa28.12■■■□□ 2.09
PRKCSH-209ENST00000589838 FAM50AQ14320 339 aaKnown RBP28.12■■■□□ 2.09
PRKCSH-209ENST00000589838 IQGAP2Q13576 1575 aa28.09■■■□□ 2.09
PRKCSH-209ENST00000589838 MTUS2Q5JR59 1369 aa28.08■■■□□ 2.09
PRKCSH-209ENST00000589838 LRRIQ1Q96JM4 1722 aa28.04■■■□□ 2.08
PRKCSH-209ENST00000589838 CCDC18Q5T9S5 1454 aa28.01■■■□□ 2.07
PRKCSH-209ENST00000589838 FGD6Q6ZV73 1430 aa28.01■■■□□ 2.07
PRKCSH-209ENST00000589838 EHBP1L1Q8N3D4 1523 aa27.99■■■□□ 2.07
PRKCSH-209ENST00000589838 SUPT6HQ7KZ85 1726 aaKnown RBP27.99■■■□□ 2.07
PRKCSH-209ENST00000589838 HECW1Q76N89 1606 aa27.97■■■□□ 2.07
PRKCSH-209ENST00000589838 ZNF608Q9ULD9 1512 aaPredicted RBP27.95■■■□□ 2.06
PRKCSH-209ENST00000589838 UGGT2Q9NYU1 1516 aa27.94■■■□□ 2.06
PRKCSH-209ENST00000589838 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
PRKCSH-209ENST00000589838 CENPBP07199 599 aaPredicted RBP27.93■■■□□ 2.06
PRKCSH-209ENST00000589838 NCOA2Q15596 1464 aa27.93■■■□□ 2.06
PRKCSH-209ENST00000589838 MAPKBP1O60336 1514 aa27.92■■■□□ 2.06
PRKCSH-209ENST00000589838 MYOM3Q5VTT5 1437 aa27.91■■■□□ 2.06
PRKCSH-209ENST00000589838 KIAA0586Q9BVV6 1533 aa27.88■■■□□ 2.05
PRKCSH-209ENST00000589838 EIF4G3O43432 1585 aaKnown RBP27.87■■■□□ 2.05
PRKCSH-209ENST00000589838 ACIN1Q9UKV3 1341 aaKnown RBP27.86■■■□□ 2.05
PRKCSH-209ENST00000589838 ARHGEF11O15085 1522 aa27.84■■■□□ 2.05
PRKCSH-209ENST00000589838 EPRSP07814 1512 aaKnown RBP27.82■■■□□ 2.04
PRKCSH-209ENST00000589838 GRIN2AQ12879 1464 aa27.81■■■□□ 2.04
PRKCSH-209ENST00000589838 MAGI1Q96QZ7 1491 aaPredicted RBP27.8■■■□□ 2.04
PRKCSH-209ENST00000589838 TIMELESSQ9UNS1 1208 aa27.79■■■□□ 2.04
PRKCSH-209ENST00000589838 PTPN23Q9H3S7 1636 aa27.79■■■□□ 2.04
PRKCSH-209ENST00000589838 MAGI3Q5TCQ9 1506 aa27.77■■■□□ 2.04
PRKCSH-209ENST00000589838 HFM1A2PYH4 1435 aa27.77■■■□□ 2.04
PRKCSH-209ENST00000589838 KIAA0556O60303 1618 aa27.77■■■□□ 2.04
PRKCSH-209ENST00000589838 MIER1Q8N108 512 aa27.76■■■□□ 2.04
PRKCSH-209ENST00000589838 SCAF1Q9H7N4 1312 aaKnown RBP27.76■■■□□ 2.03
PRKCSH-209ENST00000589838 TCOF1Q13428 1488 aaKnown RBP27.73■■■□□ 2.03
PRKCSH-209ENST00000589838 DISP1Q96F81 1524 aa27.72■■■□□ 2.03
PRKCSH-209ENST00000589838 NEUROD1Q13562 356 aa27.72■■■□□ 2.03
PRKCSH-209ENST00000589838 SYNJ2O15056 1496 aa27.7■■■□□ 2.02
PRKCSH-209ENST00000589838 PTPRKQ15262 1439 aa27.7■■■□□ 2.02
PRKCSH-209ENST00000589838 MIA2Q96PC5 1412 aa27.68■■■□□ 2.02
PRKCSH-209ENST00000589838 CDK13Q14004 1512 aaKnown RBP27.68■■■□□ 2.02
PRKCSH-209ENST00000589838 UACAQ9BZF9 1416 aa27.66■■■□□ 2.02
PRKCSH-209ENST00000589838 CHMP7Q8WUX9 453 aaPredicted RBP27.66■■■□□ 2.02
PRKCSH-209ENST00000589838 NAIPQ13075 1403 aa27.65■■■□□ 2.02
PRKCSH-209ENST00000589838 RAPGEF6Q8TEU7 1601 aa27.64■■■□□ 2.02
PRKCSH-209ENST00000589838 SIN3AQ96ST3 1273 aa27.62■■■□□ 2.01
PRKCSH-209ENST00000589838 CDK11AQ9UQ88 783 aaPredicted RBP27.59■■■□□ 2.01
PRKCSH-209ENST00000589838 AKNAQ7Z591 1439 aa27.59■■■□□ 2.01
PRKCSH-209ENST00000589838 CEP170Q5SW79 1584 aa27.59■■■□□ 2.01
PRKCSH-209ENST00000589838 GCC2Q8IWJ2 1684 aa27.57■■■□□ 2
PRKCSH-209ENST00000589838 NUP153P49790 1475 aaKnown RBP27.57■■■□□ 2
PRKCSH-209ENST00000589838 CARMIL2Q6F5E8 1435 aa27.54■■■□□ 2
PRKCSH-209ENST00000589838 NUP160Q12769 1436 aa27.54■■■□□ 2
PRKCSH-209ENST00000589838 PPP1R15AO75807 674 aaPredicted RBP27.49■■□□□ 1.99
PRKCSH-209ENST00000589838 YTHDC1Q96MU7 727 aaKnown RBP27.49■■□□□ 1.99
PRKCSH-209ENST00000589838 ARID3CA6NKF2 412 aa27.48■■□□□ 1.99
PRKCSH-209ENST00000589838 FBLN2P98095 1184 aa27.48■■□□□ 1.99
PRKCSH-209ENST00000589838 TONSLQ96HA7 1378 aa27.47■■□□□ 1.99
PRKCSH-209ENST00000589838 JPH4Q96JJ6 628 aa27.45■■□□□ 1.99
PRKCSH-209ENST00000589838 RRP7BPQ9NSQ0 103 aa27.44■■□□□ 1.98
PRKCSH-209ENST00000589838 TROQ12816 1431 aaPredicted RBP27.43■■□□□ 1.98
PRKCSH-209ENST00000589838 CHIC2Q9UKJ5 165 aa27.42■■□□□ 1.98
PRKCSH-209ENST00000589838 GTF3C3Q9Y5Q9 886 aa27.41■■□□□ 1.98
PRKCSH-209ENST00000589838 ROCK1Q13464 1354 aa27.41■■□□□ 1.98
PRKCSH-209ENST00000589838 DNMT1P26358 1616 aaKnown RBP27.4■■□□□ 1.98
PRKCSH-209ENST00000589838 DAPK1P53355 1430 aa27.39■■□□□ 1.97
PRKCSH-209ENST00000589838 ITSN2Q9NZM3 1697 aa27.38■■□□□ 1.97
PRKCSH-209ENST00000589838 ADCY10Q96PN6 1610 aa27.37■■□□□ 1.97
PRKCSH-209ENST00000589838 PLB1Q6P1J6 1458 aa27.37■■□□□ 1.97
PRKCSH-209ENST00000589838 TRIM52Q96A61 297 aa27.34■■□□□ 1.97
PRKCSH-209ENST00000589838 ABCC5O15440 1437 aa27.32■■□□□ 1.96
PRKCSH-209ENST00000589838 PRG4Q92954 1404 aaPredicted RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms