RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
DDX39A-210ENST00000589675 PRG4Q92954 1404 aaPredicted RBP19.41■□□□□ 0.7
DDX39A-210ENST00000589675 KIAA0586Q9BVV6 1533 aa19.35■□□□□ 0.69
DDX39A-210ENST00000589675 CARMIL1Q5VZK9 1371 aa19.31■□□□□ 0.68
DDX39A-210ENST00000589675 KIF13AQ9H1H9 1805 aa19.21■□□□□ 0.67
DDX39A-210ENST00000589675 ADCY10Q96PN6 1610 aa19.18■□□□□ 0.66
DDX39A-210ENST00000589675 NPM1P06748 294 aaKnown RBP eCLIP19.18■□□□□ 0.66
DDX39A-210ENST00000589675 MAPKBP1O60336 1514 aa19.17■□□□□ 0.66
DDX39A-210ENST00000589675 IQGAP2Q13576 1575 aa19.17■□□□□ 0.66
DDX39A-210ENST00000589675 CARMIL2Q6F5E8 1435 aa19.15■□□□□ 0.66
DDX39A-210ENST00000589675 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
DDX39A-210ENST00000589675 PTPRGP23470 1445 aa19.13■□□□□ 0.65
DDX39A-210ENST00000589675 ABCC10Q5T3U5 1492 aa19.13■□□□□ 0.65
DDX39A-210ENST00000589675 TNIKQ9UKE5 1360 aa19.12■□□□□ 0.65
DDX39A-210ENST00000589675 DIP2BQ9P265 1576 aa19.07■□□□□ 0.64
DDX39A-210ENST00000589675 DISP1Q96F81 1524 aa19.07■□□□□ 0.64
DDX39A-210ENST00000589675 UGGT2Q9NYU1 1516 aa19.07■□□□□ 0.64
DDX39A-210ENST00000589675 FAM69CQ0P6D2 419 aa19.06■□□□□ 0.64
DDX39A-210ENST00000589675 UHRF1BP1LA0JNW5 1464 aa19.03■□□□□ 0.64
DDX39A-210ENST00000589675 ABCC2Q92887 1545 aa19.03■□□□□ 0.64
DDX39A-210ENST00000589675 CTTNBP2Q8WZ74 1663 aa19.01■□□□□ 0.63
DDX39A-210ENST00000589675 UACAQ9BZF9 1416 aa19■□□□□ 0.63
DDX39A-210ENST00000589675 PRXQ9BXM0 1461 aa18.99■□□□□ 0.63
DDX39A-210ENST00000589675 KIAA0556O60303 1618 aa18.99■□□□□ 0.63
DDX39A-210ENST00000589675 TTBK1Q5TCY1 1321 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-210ENST00000589675 PLB1Q6P1J6 1458 aa18.96■□□□□ 0.63
DDX39A-210ENST00000589675 KDM5BQ9UGL1 1544 aa18.94■□□□□ 0.62
DDX39A-210ENST00000589675 ASXL2Q76L83 1435 aa18.93■□□□□ 0.62
DDX39A-210ENST00000589675 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
DDX39A-210ENST00000589675 GLI2P10070 1586 aa18.92■□□□□ 0.62
DDX39A-210ENST00000589675 TSPOAP1O95153 1857 aa18.92■□□□□ 0.62
DDX39A-210ENST00000589675 AEBP2Q6ZN18 517 aaPredicted RBP18.88■□□□□ 0.61
DDX39A-210ENST00000589675 ZCCHC11Q5TAX3 1644 aaKnown RBP18.87■□□□□ 0.61
DDX39A-210ENST00000589675 KDM6BO15054 1643 aa18.86■□□□□ 0.61
DDX39A-210ENST00000589675 CSRNP3Q8WYN3 585 aa18.86■□□□□ 0.61
DDX39A-210ENST00000589675 EPRSP07814 1512 aaKnown RBP18.84■□□□□ 0.61
DDX39A-210ENST00000589675 EEA1Q15075 1411 aa18.83■□□□□ 0.61
DDX39A-210ENST00000589675 PPRC1Q5VV67 1664 aaKnown RBP18.83■□□□□ 0.61
DDX39A-210ENST00000589675 ABCA8O94911 1581 aa18.82■□□□□ 0.6
DDX39A-210ENST00000589675 MAP3K4Q9Y6R4 1608 aa18.8■□□□□ 0.6
DDX39A-210ENST00000589675 WDR7Q9Y4E6 1490 aa18.77■□□□□ 0.6
DDX39A-210ENST00000589675 FAM9AQ8IZU1 332 aaPredicted RBP18.75■□□□□ 0.59
DDX39A-210ENST00000589675 SAMD9Q5K651 1589 aa18.74■□□□□ 0.59
DDX39A-210ENST00000589675 TEX14Q8IWB6 1497 aa18.74■□□□□ 0.59
DDX39A-210ENST00000589675 CFAP43Q8NDM7 1665 aa18.69■□□□□ 0.58
DDX39A-210ENST00000589675 P3H3Q8IVL6 736 aa18.67■□□□□ 0.58
DDX39A-210ENST00000589675 ATP10BO94823 1461 aa18.66■□□□□ 0.58
DDX39A-210ENST00000589675 COL17A1Q9UMD9 1497 aaPredicted RBP18.66■□□□□ 0.58
DDX39A-210ENST00000589675 MAGI3Q5TCQ9 1506 aa18.66■□□□□ 0.58
DDX39A-210ENST00000589675 KIF21BO75037 1637 aa18.66■□□□□ 0.58
DDX39A-210ENST00000589675 CD109Q6YHK3 1445 aa18.65■□□□□ 0.58
DDX39A-210ENST00000589675 KDM4FA0A1W2PPD8 638 aa18.63■□□□□ 0.57
DDX39A-210ENST00000589675 KCNH8Q96L42 1107 aa18.63■□□□□ 0.57
DDX39A-210ENST00000589675 RAPGEF6Q8TEU7 1601 aa18.63■□□□□ 0.57
DDX39A-210ENST00000589675 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
DDX39A-210ENST00000589675 EFCAB5A4FU69 1503 aa18.58■□□□□ 0.56
DDX39A-210ENST00000589675 ABCA9Q8IUA7 1624 aa18.56■□□□□ 0.56
DDX39A-210ENST00000589675 NUP153P49790 1475 aaKnown RBP18.55■□□□□ 0.56
DDX39A-210ENST00000589675 FHOD3Q2V2M9 1422 aa18.55■□□□□ 0.56
DDX39A-210ENST00000589675 ARID3CA6NKF2 412 aa18.54■□□□□ 0.56
DDX39A-210ENST00000589675 ARAP3Q8WWN8 1544 aa18.53■□□□□ 0.56
DDX39A-210ENST00000589675 PHLDB1Q86UU1 1377 aa18.53■□□□□ 0.56
DDX39A-210ENST00000589675 RANGAP1P46060 587 aaPredicted RBP18.51■□□□□ 0.55
DDX39A-210ENST00000589675 ADGRL1O94910 1474 aa18.49■□□□□ 0.55
DDX39A-210ENST00000589675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
DDX39A-210ENST00000589675 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
DDX39A-210ENST00000589675 PLEKHD1A6NEE1 506 aa18.46■□□□□ 0.55
DDX39A-210ENST00000589675 NEO1Q92859 1461 aa18.46■□□□□ 0.54
DDX39A-210ENST00000589675 UBTFP17480 764 aaKnown RBP18.45■□□□□ 0.54
DDX39A-210ENST00000589675 FMN1Q68DA7 1419 aa18.4■□□□□ 0.54
DDX39A-210ENST00000589675 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.54
DDX39A-210ENST00000589675 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.37■□□□□ 0.534e-7■■□□□ 11.9
DDX39A-210ENST00000589675 HECW1Q76N89 1606 aa18.35■□□□□ 0.53
DDX39A-210ENST00000589675 CFAP74Q9C0B2 1584 aa18.35■□□□□ 0.53
DDX39A-210ENST00000589675 CDK13Q14004 1512 aaKnown RBP18.35■□□□□ 0.53
DDX39A-210ENST00000589675 RAPGEF3O95398 923 aa18.34■□□□□ 0.53
DDX39A-210ENST00000589675 EHMT2Q96KQ7 1210 aa18.34■□□□□ 0.53
DDX39A-210ENST00000589675 FRMPD1Q5SYB0 1578 aa18.33■□□□□ 0.52
DDX39A-210ENST00000589675 TTC37Q6PGP7 1564 aa18.32■□□□□ 0.52
DDX39A-210ENST00000589675 FANCAO15360 1455 aa18.32■□□□□ 0.52
DDX39A-210ENST00000589675 AKNAQ7Z591 1439 aa18.32■□□□□ 0.52
DDX39A-210ENST00000589675 RICTORQ6R327 1708 aa18.31■□□□□ 0.52
DDX39A-210ENST00000589675 CDK11AQ9UQ88 783 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-210ENST00000589675 DENND4BO75064 1496 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-210ENST00000589675 PLCH2O75038 1416 aa18.28■□□□□ 0.52
DDX39A-210ENST00000589675 ATP1B4Q9UN42 357 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-210ENST00000589675 ADAMTSL3P82987 1691 aa18.25■□□□□ 0.51
DDX39A-210ENST00000589675 ZMYM4Q5VZL5 1548 aa18.24■□□□□ 0.51
DDX39A-210ENST00000589675 LRRIQ1Q96JM4 1722 aa18.24■□□□□ 0.51
DDX39A-210ENST00000589675 ARHGEF40Q8TER5 1519 aa18.23■□□□□ 0.51
DDX39A-210ENST00000589675 MYO5CQ9NQX4 1742 aa18.23■□□□□ 0.51
DDX39A-210ENST00000589675 TROQ12816 1431 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-210ENST00000589675 MAGI2Q86UL8 1455 aa18.22■□□□□ 0.51
DDX39A-210ENST00000589675 BCORL1Q5H9F3 1711 aa18.22■□□□□ 0.51
DDX39A-210ENST00000589675 CASKIN1Q8WXD9 1431 aa18.22■□□□□ 0.51
DDX39A-210ENST00000589675 KIF14Q15058 1648 aa18.21■□□□□ 0.51
DDX39A-210ENST00000589675 HECW2Q9P2P5 1572 aa18.21■□□□□ 0.51
DDX39A-210ENST00000589675 EFCAB2Q5VUJ9 269 aa18.2■□□□□ 0.5
DDX39A-210ENST00000589675 CLIP1P30622 1438 aa18.2■□□□□ 0.5
DDX39A-210ENST00000589675 CCDC18Q5T9S5 1454 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms