RNA–Protein interactions for RNA: ENST00000589572.5

TNPO2-215, Transcript of transportin 2, humanhuman

TSL 3

Gene TNPO2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-215ENST00000589572 NUP160Q12769 1436 aa19.35■□□□□ 0.69
TNPO2-215ENST00000589572 UBTFP17480 764 aaKnown RBP19.31■□□□□ 0.68
TNPO2-215ENST00000589572 CTTNBP2Q8WZ74 1663 aa19.28■□□□□ 0.68
TNPO2-215ENST00000589572 CLASP1Q7Z460 1538 aa19.27■□□□□ 0.68
TNPO2-215ENST00000589572 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
TNPO2-215ENST00000589572 TNIKQ9UKE5 1360 aa19.24■□□□□ 0.67
TNPO2-215ENST00000589572 IQGAP2Q13576 1575 aa19.23■□□□□ 0.67
TNPO2-215ENST00000589572 RANGAP1P46060 587 aaPredicted RBP19.21■□□□□ 0.67
TNPO2-215ENST00000589572 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
TNPO2-215ENST00000589572 SHROOM2Q13796 1616 aa19.15■□□□□ 0.66
TNPO2-215ENST00000589572 JPH4Q96JJ6 628 aa19.15■□□□□ 0.66
TNPO2-215ENST00000589572 UGGT2Q9NYU1 1516 aa19.14■□□□□ 0.65
TNPO2-215ENST00000589572 ERCC6L2Q5T890 1561 aa19.12■□□□□ 0.65
TNPO2-215ENST00000589572 CEP162Q5TB80 1403 aa19.11■□□□□ 0.65
TNPO2-215ENST00000589572 PRG4Q92954 1404 aaPredicted RBP19.1■□□□□ 0.65
TNPO2-215ENST00000589572 DISP1Q96F81 1524 aa19.1■□□□□ 0.65
TNPO2-215ENST00000589572 SAMD9Q5K651 1589 aa19.08■□□□□ 0.65
TNPO2-215ENST00000589572 P3H3Q8IVL6 736 aa19.08■□□□□ 0.64
TNPO2-215ENST00000589572 ARHGAP35Q9NRY4 1499 aa19.08■□□□□ 0.64
TNPO2-215ENST00000589572 CLIP1P30622 1438 aa19.08■□□□□ 0.64
TNPO2-215ENST00000589572 KIAA0556O60303 1618 aa19.06■□□□□ 0.64
TNPO2-215ENST00000589572 ARHGEF11O15085 1522 aa19.05■□□□□ 0.64
TNPO2-215ENST00000589572 FHOD3Q2V2M9 1422 aa19.03■□□□□ 0.64
TNPO2-215ENST00000589572 EFCAB5A4FU69 1503 aa19.03■□□□□ 0.64
TNPO2-215ENST00000589572 ARAP1Q96P48 1450 aa19.01■□□□□ 0.63
TNPO2-215ENST00000589572 CARMIL2Q6F5E8 1435 aa19■□□□□ 0.63
TNPO2-215ENST00000589572 RIMBP3CA6NJZ7 1639 aa19■□□□□ 0.63
TNPO2-215ENST00000589572 RIMBP3BA6NNM3 1639 aa19■□□□□ 0.63
TNPO2-215ENST00000589572 RIMBP3Q9UFD9 1639 aa19■□□□□ 0.63
TNPO2-215ENST00000589572 TTBK1Q5TCY1 1321 aaPredicted RBP18.99■□□□□ 0.63
TNPO2-215ENST00000589572 TRHP20396 242 aaPredicted RBP18.96■□□□□ 0.63
TNPO2-215ENST00000589572 PTPRGP23470 1445 aa18.91■□□□□ 0.62
TNPO2-215ENST00000589572 PLB1Q6P1J6 1458 aa18.86■□□□□ 0.61
TNPO2-215ENST00000589572 PCF11O94913 1555 aaKnown RBP18.84■□□□□ 0.61
TNPO2-215ENST00000589572 FMN1Q68DA7 1419 aa18.83■□□□□ 0.61
TNPO2-215ENST00000589572 ABCA8O94911 1581 aa18.83■□□□□ 0.6
TNPO2-215ENST00000589572 VPS8Q8N3P4 1428 aa18.83■□□□□ 0.6
TNPO2-215ENST00000589572 NPM1P06748 294 aaKnown RBP eCLIP18.82■□□□□ 0.6
TNPO2-215ENST00000589572 RAPGEF6Q8TEU7 1601 aa18.8■□□□□ 0.6
TNPO2-215ENST00000589572 UACAQ9BZF9 1416 aa18.79■□□□□ 0.6
TNPO2-215ENST00000589572 CASKIN1Q8WXD9 1431 aa18.78■□□□□ 0.6
TNPO2-215ENST00000589572 ARID3CA6NKF2 412 aa18.77■□□□□ 0.6
TNPO2-215ENST00000589572 ADCY10Q96PN6 1610 aa18.77■□□□□ 0.6
TNPO2-215ENST00000589572 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.59
TNPO2-215ENST00000589572 ABCC2Q92887 1545 aa18.76■□□□□ 0.59
TNPO2-215ENST00000589572 ATP1B4Q9UN42 357 aaPredicted RBP18.76■□□□□ 0.59
TNPO2-215ENST00000589572 UHRF1BP1LA0JNW5 1464 aa18.74■□□□□ 0.59
TNPO2-215ENST00000589572 FYCO1Q9BQS8 1478 aa18.74■□□□□ 0.59
TNPO2-215ENST00000589572 LRRIQ1Q96JM4 1722 aa18.74■□□□□ 0.59
TNPO2-215ENST00000589572 HECW1Q76N89 1606 aa18.73■□□□□ 0.59
TNPO2-215ENST00000589572 CDK13Q14004 1512 aaKnown RBP18.7■□□□□ 0.58
TNPO2-215ENST00000589572 EPRSP07814 1512 aaKnown RBP18.69■□□□□ 0.58
TNPO2-215ENST00000589572 ATP10BO94823 1461 aa18.68■□□□□ 0.58
TNPO2-215ENST00000589572 KDM5BQ9UGL1 1544 aa18.66■□□□□ 0.58
TNPO2-215ENST00000589572 ZCCHC11Q5TAX3 1644 aaKnown RBP18.65■□□□□ 0.58
TNPO2-215ENST00000589572 CCDC18Q5T9S5 1454 aa18.63■□□□□ 0.57
TNPO2-215ENST00000589572 CFAP43Q8NDM7 1665 aa18.63■□□□□ 0.57
TNPO2-215ENST00000589572 TIAM1Q13009 1591 aa18.62■□□□□ 0.57
TNPO2-215ENST00000589572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
TNPO2-215ENST00000589572 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
TNPO2-215ENST00000589572 MAGI3Q5TCQ9 1506 aa18.6■□□□□ 0.57
TNPO2-215ENST00000589572 KANK4Q5T7N3 995 aaPredicted RBP18.58■□□□□ 0.56
TNPO2-215ENST00000589572 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
TNPO2-215ENST00000589572 MAP3K1Q13233 1512 aa18.56■□□□□ 0.56
TNPO2-215ENST00000589572 APLP2Q06481 763 aa18.54■□□□□ 0.56
TNPO2-215ENST00000589572 ASXL2Q76L83 1435 aa18.54■□□□□ 0.56
TNPO2-215ENST00000589572 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.56
TNPO2-215ENST00000589572 MAPKBP1O60336 1514 aa18.51■□□□□ 0.55
TNPO2-215ENST00000589572 FAM69CQ0P6D2 419 aa18.51■□□□□ 0.55
TNPO2-215ENST00000589572 TROQ12816 1431 aaPredicted RBP18.5■□□□□ 0.55
TNPO2-215ENST00000589572 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
TNPO2-215ENST00000589572 WDR7Q9Y4E6 1490 aa18.5■□□□□ 0.55
TNPO2-215ENST00000589572 PLEKHD1A6NEE1 506 aa18.49■□□□□ 0.55
TNPO2-215ENST00000589572 EHBP1L1Q8N3D4 1523 aa18.49■□□□□ 0.55
TNPO2-215ENST00000589572 KIF14Q15058 1648 aa18.48■□□□□ 0.55
TNPO2-215ENST00000589572 CDK11AQ9UQ88 783 aaPredicted RBP18.47■□□□□ 0.55
TNPO2-215ENST00000589572 KCNH8Q96L42 1107 aa18.46■□□□□ 0.55
TNPO2-215ENST00000589572 NCOA2Q15596 1464 aa18.41■□□□□ 0.54
TNPO2-215ENST00000589572 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
TNPO2-215ENST00000589572 TTC37Q6PGP7 1564 aa18.4■□□□□ 0.54
TNPO2-215ENST00000589572 SUPT6HQ7KZ85 1726 aaKnown RBP18.4■□□□□ 0.54
TNPO2-215ENST00000589572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.39■□□□□ 0.54
TNPO2-215ENST00000589572 DIP2BQ9P265 1576 aa18.39■□□□□ 0.53
TNPO2-215ENST00000589572 PHLDB1Q86UU1 1377 aa18.36■□□□□ 0.53
TNPO2-215ENST00000589572 ABCA9Q8IUA7 1624 aa18.34■□□□□ 0.53
TNPO2-215ENST00000589572 GLI2P10070 1586 aa18.34■□□□□ 0.53
TNPO2-215ENST00000589572 KIF13AQ9H1H9 1805 aa18.33■□□□□ 0.52
TNPO2-215ENST00000589572 CCNB3Q8WWL7 1395 aa18.31■□□□□ 0.52
TNPO2-215ENST00000589572 GPATCH8Q9UKJ3 1502 aaKnown RBP18.31■□□□□ 0.52
TNPO2-215ENST00000589572 CDC42BPAQ5VT25 1732 aa18.3■□□□□ 0.52
TNPO2-215ENST00000589572 MAP3K4Q9Y6R4 1608 aa18.3■□□□□ 0.52
TNPO2-215ENST00000589572 MYOM3Q5VTT5 1437 aa18.28■□□□□ 0.52
TNPO2-215ENST00000589572 CD109Q6YHK3 1445 aa18.28■□□□□ 0.52
TNPO2-215ENST00000589572 PREX2Q70Z35 1606 aa18.27■□□□□ 0.52
TNPO2-215ENST00000589572 MYO5CQ9NQX4 1742 aa18.27■□□□□ 0.52
TNPO2-215ENST00000589572 CDC42BPBQ9Y5S2 1711 aa18.26■□□□□ 0.51
TNPO2-215ENST00000589572 PLCH2O75038 1416 aa18.26■□□□□ 0.51
TNPO2-215ENST00000589572 PPRC1Q5VV67 1664 aaKnown RBP18.24■□□□□ 0.51
TNPO2-215ENST00000589572 ITSN2Q9NZM3 1697 aa18.24■□□□□ 0.51
TNPO2-215ENST00000589572 FGD6Q6ZV73 1430 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms