RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 JPH4Q96JJ6 628 aa28.44■■■□□ 2.14
NFIC-208ENST00000589537 KIAA0586Q9BVV6 1533 aa28.43■■■□□ 2.14
NFIC-208ENST00000589537 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
NFIC-208ENST00000589537 TRHP20396 242 aaPredicted RBP28.36■■■□□ 2.13
NFIC-208ENST00000589537 RAPGEF2Q9Y4G8 1499 aa28.26■■■□□ 2.11
NFIC-208ENST00000589537 IQGAP2Q13576 1575 aa28.21■■■□□ 2.11
NFIC-208ENST00000589537 CARMIL2Q6F5E8 1435 aa28.17■■■□□ 2.1
NFIC-208ENST00000589537 TNIKQ9UKE5 1360 aa28.07■■■□□ 2.08
NFIC-208ENST00000589537 NPM1P06748 294 aaKnown RBP eCLIP28.06■■■□□ 2.08
NFIC-208ENST00000589537 PTPRGP23470 1445 aa28.06■■■□□ 2.08
NFIC-208ENST00000589537 PRXQ9BXM0 1461 aa28.06■■■□□ 2.08
NFIC-208ENST00000589537 UGGT2Q9NYU1 1516 aa28.05■■■□□ 2.08
NFIC-208ENST00000589537 ADCY10Q96PN6 1610 aa28.04■■■□□ 2.08
NFIC-208ENST00000589537 MAPKBP1O60336 1514 aa28.01■■■□□ 2.07
NFIC-208ENST00000589537 DISP1Q96F81 1524 aa28■■■□□ 2.07
NFIC-208ENST00000589537 CTTNBP2Q8WZ74 1663 aa28■■■□□ 2.07
NFIC-208ENST00000589537 EEA1Q15075 1411 aa28■■■□□ 2.07
NFIC-208ENST00000589537 KIAA0556O60303 1618 aa27.92■■■□□ 2.06
NFIC-208ENST00000589537 GOLGA3Q08378 1498 aa27.91■■■□□ 2.06
NFIC-208ENST00000589537 CSRNP3Q8WYN3 585 aa27.91■■■□□ 2.06
NFIC-208ENST00000589537 UHRF1BP1LA0JNW5 1464 aa27.9■■■□□ 2.06
NFIC-208ENST00000589537 ABCC10Q5T3U5 1492 aa27.9■■■□□ 2.06
NFIC-208ENST00000589537 ABCC2Q92887 1545 aa27.88■■■□□ 2.05
NFIC-208ENST00000589537 UACAQ9BZF9 1416 aa27.88■■■□□ 2.05
NFIC-208ENST00000589537 TTBK1Q5TCY1 1321 aaPredicted RBP27.88■■■□□ 2.05
NFIC-208ENST00000589537 KIF13AQ9H1H9 1805 aa27.88■■■□□ 2.05
NFIC-208ENST00000589537 DIP2BQ9P265 1576 aa27.82■■■□□ 2.04
NFIC-208ENST00000589537 FAM69CQ0P6D2 419 aa27.8■■■□□ 2.04
NFIC-208ENST00000589537 PLB1Q6P1J6 1458 aa27.76■■■□□ 2.03
NFIC-208ENST00000589537 KDM5BQ9UGL1 1544 aa27.75■■■□□ 2.03
NFIC-208ENST00000589537 ASXL2Q76L83 1435 aa27.71■■■□□ 2.03
NFIC-208ENST00000589537 CHIC1Q5VXU3 224 aa27.7■■■□□ 2.02
NFIC-208ENST00000589537 FAM9AQ8IZU1 332 aaPredicted RBP27.69■■■□□ 2.02
NFIC-208ENST00000589537 KIF21BO75037 1637 aa27.67■■■□□ 2.02
NFIC-208ENST00000589537 ABCA8O94911 1581 aa27.65■■■□□ 2.02
NFIC-208ENST00000589537 ZCCHC11Q5TAX3 1644 aaKnown RBP27.65■■■□□ 2.02
NFIC-208ENST00000589537 GLI2P10070 1586 aa27.65■■■□□ 2.02
NFIC-208ENST00000589537 SAMD9Q5K651 1589 aa27.63■■■□□ 2.01
NFIC-208ENST00000589537 EPRSP07814 1512 aaKnown RBP27.56■■■□□ 2
NFIC-208ENST00000589537 WDR7Q9Y4E6 1490 aa27.54■■■□□ 2
NFIC-208ENST00000589537 P3H3Q8IVL6 736 aa27.51■■□□□ 1.99
NFIC-208ENST00000589537 TSPOAP1O95153 1857 aa27.51■■□□□ 1.99
NFIC-208ENST00000589537 KDM6BO15054 1643 aa27.49■■□□□ 1.99
NFIC-208ENST00000589537 EFCAB5A4FU69 1503 aa27.49■■□□□ 1.99
NFIC-208ENST00000589537 MAP3K4Q9Y6R4 1608 aa27.47■■□□□ 1.99
NFIC-208ENST00000589537 TEX14Q8IWB6 1497 aa27.44■■□□□ 1.98
NFIC-208ENST00000589537 RAPGEF6Q8TEU7 1601 aa27.43■■□□□ 1.98
NFIC-208ENST00000589537 PPRC1Q5VV67 1664 aaKnown RBP27.43■■□□□ 1.98
NFIC-208ENST00000589537 FHOD3Q2V2M9 1422 aa27.4■■□□□ 1.98
NFIC-208ENST00000589537 ATP10BO94823 1461 aa27.39■■□□□ 1.98
NFIC-208ENST00000589537 UBTFP17480 764 aaKnown RBP27.38■■□□□ 1.97
NFIC-208ENST00000589537 RANGAP1P46060 587 aaPredicted RBP27.38■■□□□ 1.97
NFIC-208ENST00000589537 CFAP43Q8NDM7 1665 aa27.36■■□□□ 1.97
NFIC-208ENST00000589537 CD109Q6YHK3 1445 aa27.32■■□□□ 1.96
NFIC-208ENST00000589537 NUP153P49790 1475 aaKnown RBP27.32■■□□□ 1.96
NFIC-208ENST00000589537 MAGI3Q5TCQ9 1506 aa27.31■■□□□ 1.96
NFIC-208ENST00000589537 KCNH8Q96L42 1107 aa27.31■■□□□ 1.96
NFIC-208ENST00000589537 ARID3CA6NKF2 412 aa27.28■■□□□ 1.96
NFIC-208ENST00000589537 AEBP2Q6ZN18 517 aaPredicted RBP27.25■■□□□ 1.95
NFIC-208ENST00000589537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.24■■□□□ 1.95
NFIC-208ENST00000589537 HNRNPUL2Q1KMD3 747 aaKnown RBP27.24■■□□□ 1.95
NFIC-208ENST00000589537 EHMT2Q96KQ7 1210 aa27.24■■□□□ 1.95
NFIC-208ENST00000589537 FMN1Q68DA7 1419 aa27.24■■□□□ 1.95
NFIC-208ENST00000589537 ARHGAP35Q9NRY4 1499 aa27.21■■□□□ 1.95
NFIC-208ENST00000589537 ABCA9Q8IUA7 1624 aa27.21■■□□□ 1.95
NFIC-208ENST00000589537 COL17A1Q9UMD9 1497 aaPredicted RBP27.18■■□□□ 1.94
NFIC-208ENST00000589537 PLEKHD1A6NEE1 506 aa27.15■■□□□ 1.94
NFIC-208ENST00000589537 PHLDB1Q86UU1 1377 aa27.14■■□□□ 1.94
NFIC-208ENST00000589537 HECW1Q76N89 1606 aa27.12■■□□□ 1.93
NFIC-208ENST00000589537 ARAP3Q8WWN8 1544 aa27.08■■□□□ 1.93
NFIC-208ENST00000589537 NEO1Q92859 1461 aa27.06■■□□□ 1.92
NFIC-208ENST00000589537 CDK13Q14004 1512 aaKnown RBP27.06■■□□□ 1.92
NFIC-208ENST00000589537 CDK11AQ9UQ88 783 aaPredicted RBP27.01■■□□□ 1.91
NFIC-208ENST00000589537 ATP1B4Q9UN42 357 aaPredicted RBP27■■□□□ 1.91
NFIC-208ENST00000589537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.99■■□□□ 1.914e-6■■■□□ 14.8
NFIC-208ENST00000589537 CFAP74Q9C0B2 1584 aa26.97■■□□□ 1.91
NFIC-208ENST00000589537 CLIP1P30622 1438 aa26.95■■□□□ 1.9
NFIC-208ENST00000589537 CASKIN1Q8WXD9 1431 aa26.95■■□□□ 1.9
NFIC-208ENST00000589537 KDM4FA0A1W2PPD8 638 aa26.94■■□□□ 1.9
NFIC-208ENST00000589537 TTC37Q6PGP7 1564 aa26.93■■□□□ 1.9
NFIC-208ENST00000589537 CCDC18Q5T9S5 1454 aa26.93■■□□□ 1.9
NFIC-208ENST00000589537 FANCAO15360 1455 aa26.91■■□□□ 1.9
NFIC-208ENST00000589537 PCF11O94913 1555 aaKnown RBP26.9■■□□□ 1.9
NFIC-208ENST00000589537 TROQ12816 1431 aaPredicted RBP26.9■■□□□ 1.9
NFIC-208ENST00000589537 ADGRL1O94910 1474 aa26.89■■□□□ 1.9
NFIC-208ENST00000589537 FYCO1Q9BQS8 1478 aa26.89■■□□□ 1.9
NFIC-208ENST00000589537 KIF14Q15058 1648 aa26.88■■□□□ 1.89
NFIC-208ENST00000589537 AKNAQ7Z591 1439 aa26.87■■□□□ 1.89
NFIC-208ENST00000589537 PLCH2O75038 1416 aa26.85■■□□□ 1.89
NFIC-208ENST00000589537 DENND4BO75064 1496 aaPredicted RBP26.85■■□□□ 1.89
NFIC-208ENST00000589537 LRRIQ1Q96JM4 1722 aa26.85■■□□□ 1.89
NFIC-208ENST00000589537 RAPGEF3O95398 923 aa26.83■■□□□ 1.89
NFIC-208ENST00000589537 FRMPD1Q5SYB0 1578 aa26.83■■□□□ 1.89
NFIC-208ENST00000589537 MYO5CQ9NQX4 1742 aa26.8■■□□□ 1.88
NFIC-208ENST00000589537 RICTORQ6R327 1708 aa26.77■■□□□ 1.88
NFIC-208ENST00000589537 EFCAB2Q5VUJ9 269 aa26.76■■□□□ 1.87
NFIC-208ENST00000589537 ZMYM4Q5VZL5 1548 aa26.74■■□□□ 1.87
NFIC-208ENST00000589537 CEP162Q5TB80 1403 aa26.73■■□□□ 1.87
NFIC-208ENST00000589537 ARHGEF40Q8TER5 1519 aa26.73■■□□□ 1.87
NFIC-208ENST00000589537 MAGI2Q86UL8 1455 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms