RNA–Protein interactions for RNA: ENST00000589126.5

PRKCSH-208, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-208ENST00000589126 JPH4Q96JJ6 628 aa23.15■■□□□ 1.3
PRKCSH-208ENST00000589126 PRG4Q92954 1404 aaPredicted RBP23.14■■□□□ 1.29
PRKCSH-208ENST00000589126 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
PRKCSH-208ENST00000589126 TRHP20396 242 aaPredicted RBP23.01■■□□□ 1.27
PRKCSH-208ENST00000589126 RAPGEF2Q9Y4G8 1499 aa23■■□□□ 1.27
PRKCSH-208ENST00000589126 IQGAP2Q13576 1575 aa22.94■■□□□ 1.26
PRKCSH-208ENST00000589126 PRXQ9BXM0 1461 aa22.89■■□□□ 1.25
PRKCSH-208ENST00000589126 DISP1Q96F81 1524 aa22.84■■□□□ 1.25
PRKCSH-208ENST00000589126 ADCY10Q96PN6 1610 aa22.84■■□□□ 1.25
PRKCSH-208ENST00000589126 CARMIL2Q6F5E8 1435 aa22.83■■□□□ 1.25
PRKCSH-208ENST00000589126 UGGT2Q9NYU1 1516 aa22.82■■□□□ 1.24
PRKCSH-208ENST00000589126 PTPRGP23470 1445 aa22.82■■□□□ 1.24
PRKCSH-208ENST00000589126 TNIKQ9UKE5 1360 aa22.81■■□□□ 1.24
PRKCSH-208ENST00000589126 CTTNBP2Q8WZ74 1663 aa22.8■■□□□ 1.24
PRKCSH-208ENST00000589126 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
PRKCSH-208ENST00000589126 TTBK1Q5TCY1 1321 aaPredicted RBP22.78■■□□□ 1.24
PRKCSH-208ENST00000589126 KIAA0556O60303 1618 aa22.75■■□□□ 1.23
PRKCSH-208ENST00000589126 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
PRKCSH-208ENST00000589126 EEA1Q15075 1411 aa22.74■■□□□ 1.23
PRKCSH-208ENST00000589126 NPM1P06748 294 aaKnown RBP eCLIP22.72■■□□□ 1.23
PRKCSH-208ENST00000589126 MAPKBP1O60336 1514 aa22.72■■□□□ 1.23
PRKCSH-208ENST00000589126 KIF13AQ9H1H9 1805 aa22.71■■□□□ 1.23
PRKCSH-208ENST00000589126 FAM9AQ8IZU1 332 aaPredicted RBP22.68■■□□□ 1.22
PRKCSH-208ENST00000589126 UHRF1BP1LA0JNW5 1464 aa22.66■■□□□ 1.22
PRKCSH-208ENST00000589126 UACAQ9BZF9 1416 aa22.66■■□□□ 1.22
PRKCSH-208ENST00000589126 ABCC2Q92887 1545 aa22.65■■□□□ 1.22
PRKCSH-208ENST00000589126 ABCC10Q5T3U5 1492 aa22.65■■□□□ 1.22
PRKCSH-208ENST00000589126 GOLGA3Q08378 1498 aa22.63■■□□□ 1.21
PRKCSH-208ENST00000589126 DIP2BQ9P265 1576 aa22.62■■□□□ 1.21
PRKCSH-208ENST00000589126 FAM69CQ0P6D2 419 aa22.6■■□□□ 1.21
PRKCSH-208ENST00000589126 PLB1Q6P1J6 1458 aa22.56■■□□□ 1.2
PRKCSH-208ENST00000589126 KIF21BO75037 1637 aa22.56■■□□□ 1.2
PRKCSH-208ENST00000589126 KDM5BQ9UGL1 1544 aa22.56■■□□□ 1.2
PRKCSH-208ENST00000589126 ASXL2Q76L83 1435 aa22.55■■□□□ 1.2
PRKCSH-208ENST00000589126 ABCA8O94911 1581 aa22.52■■□□□ 1.2
PRKCSH-208ENST00000589126 SAMD9Q5K651 1589 aa22.52■■□□□ 1.2
PRKCSH-208ENST00000589126 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
PRKCSH-208ENST00000589126 ZCCHC11Q5TAX3 1644 aaKnown RBP22.52■■□□□ 1.2
PRKCSH-208ENST00000589126 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
PRKCSH-208ENST00000589126 GLI2P10070 1586 aa22.43■■□□□ 1.18
PRKCSH-208ENST00000589126 TSPOAP1O95153 1857 aa22.43■■□□□ 1.18
PRKCSH-208ENST00000589126 EHMT2Q96KQ7 1210 aa22.42■■□□□ 1.18
PRKCSH-208ENST00000589126 EPRSP07814 1512 aaKnown RBP22.41■■□□□ 1.18
PRKCSH-208ENST00000589126 WDR7Q9Y4E6 1490 aa22.38■■□□□ 1.17
PRKCSH-208ENST00000589126 FHOD3Q2V2M9 1422 aa22.38■■□□□ 1.17
PRKCSH-208ENST00000589126 PPRC1Q5VV67 1664 aaKnown RBP22.36■■□□□ 1.17
PRKCSH-208ENST00000589126 UBTFP17480 764 aaKnown RBP22.35■■□□□ 1.17
PRKCSH-208ENST00000589126 RAPGEF6Q8TEU7 1601 aa22.34■■□□□ 1.17
PRKCSH-208ENST00000589126 ATP10BO94823 1461 aa22.34■■□□□ 1.17
PRKCSH-208ENST00000589126 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.17
PRKCSH-208ENST00000589126 MAP3K4Q9Y6R4 1608 aa22.33■■□□□ 1.17
PRKCSH-208ENST00000589126 ARID3CA6NKF2 412 aa22.33■■□□□ 1.17
PRKCSH-208ENST00000589126 KDM6BO15054 1643 aa22.29■■□□□ 1.16
PRKCSH-208ENST00000589126 NUP153P49790 1475 aaKnown RBP22.28■■□□□ 1.16
PRKCSH-208ENST00000589126 KCNH8Q96L42 1107 aa22.27■■□□□ 1.16
PRKCSH-208ENST00000589126 ARHGAP35Q9NRY4 1499 aa22.24■■□□□ 1.15
PRKCSH-208ENST00000589126 CFAP43Q8NDM7 1665 aa22.21■■□□□ 1.15
PRKCSH-208ENST00000589126 COL17A1Q9UMD9 1497 aaPredicted RBP22.2■■□□□ 1.14
PRKCSH-208ENST00000589126 CD109Q6YHK3 1445 aa22.19■■□□□ 1.14
PRKCSH-208ENST00000589126 TEX14Q8IWB6 1497 aa22.19■■□□□ 1.14
PRKCSH-208ENST00000589126 MAGI3Q5TCQ9 1506 aa22.17■■□□□ 1.14
PRKCSH-208ENST00000589126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
PRKCSH-208ENST00000589126 HNRNPUL2Q1KMD3 747 aaKnown RBP22.17■■□□□ 1.14
PRKCSH-208ENST00000589126 ABCA9Q8IUA7 1624 aa22.13■■□□□ 1.13
PRKCSH-208ENST00000589126 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
PRKCSH-208ENST00000589126 CDK13Q14004 1512 aaKnown RBP22.11■■□□□ 1.13
PRKCSH-208ENST00000589126 PLEKHD1A6NEE1 506 aa22.07■■□□□ 1.12
PRKCSH-208ENST00000589126 HECW1Q76N89 1606 aa22.06■■□□□ 1.12
PRKCSH-208ENST00000589126 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
PRKCSH-208ENST00000589126 LRRIQ1Q96JM4 1722 aa22■■□□□ 1.11
PRKCSH-208ENST00000589126 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
PRKCSH-208ENST00000589126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22■■□□□ 1.112e-23■□□□□ 8.5
PRKCSH-208ENST00000589126 CLIP1P30622 1438 aa21.99■■□□□ 1.11
PRKCSH-208ENST00000589126 ARAP3Q8WWN8 1544 aa21.99■■□□□ 1.11
PRKCSH-208ENST00000589126 TTC37Q6PGP7 1564 aa21.98■■□□□ 1.11
PRKCSH-208ENST00000589126 PCF11O94913 1555 aaKnown RBP21.97■■□□□ 1.11
PRKCSH-208ENST00000589126 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
PRKCSH-208ENST00000589126 NEO1Q92859 1461 aa21.96■■□□□ 1.11
PRKCSH-208ENST00000589126 KDM4FA0A1W2PPD8 638 aa21.95■■□□□ 1.1
PRKCSH-208ENST00000589126 PHLDB1Q86UU1 1377 aa21.94■■□□□ 1.1
PRKCSH-208ENST00000589126 CDK11AQ9UQ88 783 aaPredicted RBP21.9■■□□□ 1.1
PRKCSH-208ENST00000589126 KIF14Q15058 1648 aa21.89■■□□□ 1.09
PRKCSH-208ENST00000589126 TROQ12816 1431 aaPredicted RBP21.89■■□□□ 1.09
PRKCSH-208ENST00000589126 RAPGEF3O95398 923 aa21.88■■□□□ 1.09
PRKCSH-208ENST00000589126 FYCO1Q9BQS8 1478 aa21.88■■□□□ 1.09
PRKCSH-208ENST00000589126 FANCAO15360 1455 aa21.87■■□□□ 1.09
PRKCSH-208ENST00000589126 FRMPD1Q5SYB0 1578 aa21.87■■□□□ 1.09
PRKCSH-208ENST00000589126 CCDC18Q5T9S5 1454 aa21.86■■□□□ 1.09
PRKCSH-208ENST00000589126 AKNAQ7Z591 1439 aa21.86■■□□□ 1.09
PRKCSH-208ENST00000589126 PLCH2O75038 1416 aa21.85■■□□□ 1.09
PRKCSH-208ENST00000589126 ADGRL1O94910 1474 aa21.84■■□□□ 1.09
PRKCSH-208ENST00000589126 CFAP74Q9C0B2 1584 aa21.84■■□□□ 1.09
PRKCSH-208ENST00000589126 CEP162Q5TB80 1403 aa21.84■■□□□ 1.09
PRKCSH-208ENST00000589126 LOC105371045A0A1W2PR82 267 aa21.83■■□□□ 1.09
PRKCSH-208ENST00000589126 MYO5CQ9NQX4 1742 aa21.8■■□□□ 1.08
PRKCSH-208ENST00000589126 DENND4BO75064 1496 aaPredicted RBP21.8■■□□□ 1.08
PRKCSH-208ENST00000589126 RICTORQ6R327 1708 aa21.8■■□□□ 1.08
PRKCSH-208ENST00000589126 EFCAB2Q5VUJ9 269 aa21.74■■□□□ 1.07
PRKCSH-208ENST00000589126 SCAPERQ9BY12 1400 aa21.73■■□□□ 1.07
PRKCSH-208ENST00000589126 CDC42BPBQ9Y5S2 1711 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms