RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 RUSC2Q8N2Y8 1516 aa25.48■■□□□ 1.67
DNMT1-217ENST00000589091 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
DNMT1-217ENST00000589091 IGF1RP08069 1367 aa25.37■■□□□ 1.65
DNMT1-217ENST00000589091 JPH4Q96JJ6 628 aa25.34■■□□□ 1.65
DNMT1-217ENST00000589091 KIAA0586Q9BVV6 1533 aa25.31■■□□□ 1.64
DNMT1-217ENST00000589091 CARMIL1Q5VZK9 1371 aa25.25■■□□□ 1.63
DNMT1-217ENST00000589091 KIF13AQ9H1H9 1805 aa25.21■■□□□ 1.63
DNMT1-217ENST00000589091 IQGAP2Q13576 1575 aa25.16■■□□□ 1.62
DNMT1-217ENST00000589091 ADCY10Q96PN6 1610 aa25.14■■□□□ 1.61
DNMT1-217ENST00000589091 RAPGEF2Q9Y4G8 1499 aa25.09■■□□□ 1.61
DNMT1-217ENST00000589091 MAPKBP1O60336 1514 aa25.08■■□□□ 1.61
DNMT1-217ENST00000589091 CTTNBP2Q8WZ74 1663 aa25.07■■□□□ 1.6
DNMT1-217ENST00000589091 CARMIL2Q6F5E8 1435 aa25.07■■□□□ 1.6
DNMT1-217ENST00000589091 NPM1P06748 294 aaKnown RBP eCLIP25.05■■□□□ 1.6
DNMT1-217ENST00000589091 PTPRGP23470 1445 aa24.99■■□□□ 1.59
DNMT1-217ENST00000589091 DIP2BQ9P265 1576 aa24.99■■□□□ 1.59
DNMT1-217ENST00000589091 TNIKQ9UKE5 1360 aa24.99■■□□□ 1.59
DNMT1-217ENST00000589091 ABCC10Q5T3U5 1492 aa24.98■■□□□ 1.59
DNMT1-217ENST00000589091 UGGT2Q9NYU1 1516 aa24.97■■□□□ 1.59
DNMT1-217ENST00000589091 DISP1Q96F81 1524 aa24.94■■□□□ 1.58
DNMT1-217ENST00000589091 KIAA0556O60303 1618 aa24.93■■□□□ 1.58
DNMT1-217ENST00000589091 TSPOAP1O95153 1857 aa24.89■■□□□ 1.58
DNMT1-217ENST00000589091 ABCC2Q92887 1545 aa24.89■■□□□ 1.57
DNMT1-217ENST00000589091 UHRF1BP1LA0JNW5 1464 aa24.89■■□□□ 1.57
DNMT1-217ENST00000589091 FAM69CQ0P6D2 419 aa24.87■■□□□ 1.57
DNMT1-217ENST00000589091 PRXQ9BXM0 1461 aa24.85■■□□□ 1.57
DNMT1-217ENST00000589091 TTBK1Q5TCY1 1321 aaPredicted RBP24.85■■□□□ 1.57
DNMT1-217ENST00000589091 UACAQ9BZF9 1416 aa24.84■■□□□ 1.57
DNMT1-217ENST00000589091 GOLGA3Q08378 1498 aa24.81■■□□□ 1.56
DNMT1-217ENST00000589091 PLB1Q6P1J6 1458 aa24.78■■□□□ 1.56
DNMT1-217ENST00000589091 ZCCHC11Q5TAX3 1644 aaKnown RBP24.78■■□□□ 1.56
DNMT1-217ENST00000589091 KDM5BQ9UGL1 1544 aa24.76■■□□□ 1.55
DNMT1-217ENST00000589091 GLI2P10070 1586 aa24.76■■□□□ 1.55
DNMT1-217ENST00000589091 ASXL2Q76L83 1435 aa24.75■■□□□ 1.55
DNMT1-217ENST00000589091 KDM6BO15054 1643 aa24.74■■□□□ 1.55
DNMT1-217ENST00000589091 EEA1Q15075 1411 aa24.71■■□□□ 1.55
DNMT1-217ENST00000589091 PPRC1Q5VV67 1664 aaKnown RBP24.69■■□□□ 1.54
DNMT1-217ENST00000589091 CSRNP3Q8WYN3 585 aa24.66■■□□□ 1.54
DNMT1-217ENST00000589091 ABCA8O94911 1581 aa24.66■■□□□ 1.54
DNMT1-217ENST00000589091 MAP3K4Q9Y6R4 1608 aa24.65■■□□□ 1.54
DNMT1-217ENST00000589091 EPRSP07814 1512 aaKnown RBP24.62■■□□□ 1.53
DNMT1-217ENST00000589091 SAMD9Q5K651 1589 aa24.6■■□□□ 1.53
DNMT1-217ENST00000589091 WDR7Q9Y4E6 1490 aa24.58■■□□□ 1.52
DNMT1-217ENST00000589091 FAM9AQ8IZU1 332 aaPredicted RBP24.57■■□□□ 1.52
DNMT1-217ENST00000589091 CFAP43Q8NDM7 1665 aa24.56■■□□□ 1.52
DNMT1-217ENST00000589091 KIF21BO75037 1637 aa24.54■■□□□ 1.52
DNMT1-217ENST00000589091 TEX14Q8IWB6 1497 aa24.53■■□□□ 1.52
DNMT1-217ENST00000589091 RAPGEF6Q8TEU7 1601 aa24.48■■□□□ 1.51
DNMT1-217ENST00000589091 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
DNMT1-217ENST00000589091 EFCAB5A4FU69 1503 aa24.4■■□□□ 1.5
DNMT1-217ENST00000589091 MAGI3Q5TCQ9 1506 aa24.4■■□□□ 1.5
DNMT1-217ENST00000589091 ATP10BO94823 1461 aa24.38■■□□□ 1.49
DNMT1-217ENST00000589091 CD109Q6YHK3 1445 aa24.37■■□□□ 1.49
DNMT1-217ENST00000589091 ABCA9Q8IUA7 1624 aa24.35■■□□□ 1.49
DNMT1-217ENST00000589091 KCNH8Q96L42 1107 aa24.34■■□□□ 1.49
DNMT1-217ENST00000589091 COL17A1Q9UMD9 1497 aaPredicted RBP24.33■■□□□ 1.49
DNMT1-217ENST00000589091 FHOD3Q2V2M9 1422 aa24.32■■□□□ 1.48
DNMT1-217ENST00000589091 NUP153P49790 1475 aaKnown RBP24.29■■□□□ 1.48
DNMT1-217ENST00000589091 RANGAP1P46060 587 aaPredicted RBP24.27■■□□□ 1.48
DNMT1-217ENST00000589091 ARID3CA6NKF2 412 aa24.26■■□□□ 1.47
DNMT1-217ENST00000589091 KDM4FA0A1W2PPD8 638 aa24.22■■□□□ 1.47
DNMT1-217ENST00000589091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.22■■□□□ 1.47
DNMT1-217ENST00000589091 HNRNPUL2Q1KMD3 747 aaKnown RBP24.22■■□□□ 1.47
DNMT1-217ENST00000589091 ARAP3Q8WWN8 1544 aa24.2■■□□□ 1.47
DNMT1-217ENST00000589091 UBTFP17480 764 aaKnown RBP24.19■■□□□ 1.46
DNMT1-217ENST00000589091 PHLDB1Q86UU1 1377 aa24.18■■□□□ 1.46
DNMT1-217ENST00000589091 ADGRL1O94910 1474 aa24.18■■□□□ 1.46
DNMT1-217ENST00000589091 NEO1Q92859 1461 aa24.15■■□□□ 1.46
DNMT1-217ENST00000589091 HECW1Q76N89 1606 aa24.15■■□□□ 1.46
DNMT1-217ENST00000589091 CFAP74Q9C0B2 1584 aa24.13■■□□□ 1.45
DNMT1-217ENST00000589091 FMN1Q68DA7 1419 aa24.13■■□□□ 1.45
DNMT1-217ENST00000589091 PLEKHD1A6NEE1 506 aa24.12■■□□□ 1.45
DNMT1-217ENST00000589091 ARHGAP35Q9NRY4 1499 aa24.11■■□□□ 1.45
DNMT1-217ENST00000589091 EHMT2Q96KQ7 1210 aa24.08■■□□□ 1.45
DNMT1-217ENST00000589091 CDK13Q14004 1512 aaKnown RBP24.07■■□□□ 1.44
DNMT1-217ENST00000589091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.07■■□□□ 1.44
DNMT1-217ENST00000589091 TTC37Q6PGP7 1564 aa24.06■■□□□ 1.44
DNMT1-217ENST00000589091 RICTORQ6R327 1708 aa24.04■■□□□ 1.44
DNMT1-217ENST00000589091 LRRIQ1Q96JM4 1722 aa24.03■■□□□ 1.44
DNMT1-217ENST00000589091 MYO5CQ9NQX4 1742 aa24.02■■□□□ 1.44
DNMT1-217ENST00000589091 FRMPD1Q5SYB0 1578 aa24.02■■□□□ 1.44
DNMT1-217ENST00000589091 FANCAO15360 1455 aa23.98■■□□□ 1.43
DNMT1-217ENST00000589091 AKNAQ7Z591 1439 aa23.95■■□□□ 1.42
DNMT1-217ENST00000589091 KIF14Q15058 1648 aa23.95■■□□□ 1.42
DNMT1-217ENST00000589091 DENND4BO75064 1496 aaPredicted RBP23.94■■□□□ 1.42
DNMT1-217ENST00000589091 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
DNMT1-217ENST00000589091 CDK11AQ9UQ88 783 aaPredicted RBP23.94■■□□□ 1.42
DNMT1-217ENST00000589091 RAPGEF3O95398 923 aa23.93■■□□□ 1.42
DNMT1-217ENST00000589091 ARHGEF40Q8TER5 1519 aa23.92■■□□□ 1.42
DNMT1-217ENST00000589091 PCF11O94913 1555 aaKnown RBP23.91■■□□□ 1.42
DNMT1-217ENST00000589091 ZMYM4Q5VZL5 1548 aa23.9■■□□□ 1.42
DNMT1-217ENST00000589091 ADAMTSL3P82987 1691 aa23.9■■□□□ 1.42
DNMT1-217ENST00000589091 BCORL1Q5H9F3 1711 aa23.9■■□□□ 1.42
DNMT1-217ENST00000589091 PLCH2O75038 1416 aa23.89■■□□□ 1.41
DNMT1-217ENST00000589091 CCDC18Q5T9S5 1454 aa23.88■■□□□ 1.41
DNMT1-217ENST00000589091 CLIP1P30622 1438 aa23.88■■□□□ 1.41
DNMT1-217ENST00000589091 TROQ12816 1431 aaPredicted RBP23.87■■□□□ 1.41
DNMT1-217ENST00000589091 CASKIN1Q8WXD9 1431 aa23.86■■□□□ 1.41
DNMT1-217ENST00000589091 CDC42BPBQ9Y5S2 1711 aa23.83■■□□□ 1.41
DNMT1-217ENST00000589091 MAGI2Q86UL8 1455 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms