RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 GOLGA3Q08378 1498 aa25.34■■□□□ 1.65
RPRD1A-208ENST00000589050 KIAA0586Q9BVV6 1533 aa25.34■■□□□ 1.65
RPRD1A-208ENST00000589050 UBTFP17480 764 aaKnown RBP25.27■■□□□ 1.64
RPRD1A-208ENST00000589050 DNAJC5Q9H3Z4 198 aa25.27■■□□□ 1.64
RPRD1A-208ENST00000589050 IQGAP2Q13576 1575 aa25.26■■□□□ 1.63
RPRD1A-208ENST00000589050 CTTNBP2Q8WZ74 1663 aa25.25■■□□□ 1.63
RPRD1A-208ENST00000589050 JPH4Q96JJ6 628 aa25.24■■□□□ 1.63
RPRD1A-208ENST00000589050 SHROOM2Q13796 1616 aa25.21■■□□□ 1.63
RPRD1A-208ENST00000589050 PRG4Q92954 1404 aaPredicted RBP25.17■■□□□ 1.62
RPRD1A-208ENST00000589050 ARHGEF11O15085 1522 aa25.14■■□□□ 1.62
RPRD1A-208ENST00000589050 LOC105371045A0A1W2PR82 267 aa25.14■■□□□ 1.62
RPRD1A-208ENST00000589050 UGGT2Q9NYU1 1516 aa25.13■■□□□ 1.61
RPRD1A-208ENST00000589050 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
RPRD1A-208ENST00000589050 RANGAP1P46060 587 aaPredicted RBP25.1■■□□□ 1.61
RPRD1A-208ENST00000589050 TNIKQ9UKE5 1360 aa25.09■■□□□ 1.61
RPRD1A-208ENST00000589050 RIMBP3CA6NJZ7 1639 aa25.08■■□□□ 1.61
RPRD1A-208ENST00000589050 RIMBP3BA6NNM3 1639 aa25.08■■□□□ 1.61
RPRD1A-208ENST00000589050 RIMBP3Q9UFD9 1639 aa25.08■■□□□ 1.61
RPRD1A-208ENST00000589050 CARMIL2Q6F5E8 1435 aa25.08■■□□□ 1.61
RPRD1A-208ENST00000589050 DISP1Q96F81 1524 aa25.05■■□□□ 1.6
RPRD1A-208ENST00000589050 KIAA0556O60303 1618 aa25.01■■□□□ 1.59
RPRD1A-208ENST00000589050 ARAP1Q96P48 1450 aa24.98■■□□□ 1.59
RPRD1A-208ENST00000589050 SAMD9Q5K651 1589 aa24.97■■□□□ 1.59
RPRD1A-208ENST00000589050 P3H3Q8IVL6 736 aa24.97■■□□□ 1.59
RPRD1A-208ENST00000589050 EFCAB5A4FU69 1503 aa24.96■■□□□ 1.59
RPRD1A-208ENST00000589050 TTBK1Q5TCY1 1321 aaPredicted RBP24.94■■□□□ 1.58
RPRD1A-208ENST00000589050 PTPRGP23470 1445 aa24.92■■□□□ 1.58
RPRD1A-208ENST00000589050 CYB5RLQ6IPT4 315 aa24.91■■□□□ 1.58
RPRD1A-208ENST00000589050 CLIP1P30622 1438 aa24.91■■□□□ 1.58
RPRD1A-208ENST00000589050 ARHGAP35Q9NRY4 1499 aa24.9■■□□□ 1.58
RPRD1A-208ENST00000589050 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
RPRD1A-208ENST00000589050 FHOD3Q2V2M9 1422 aa24.89■■□□□ 1.58
RPRD1A-208ENST00000589050 UACAQ9BZF9 1416 aa24.76■■□□□ 1.55
RPRD1A-208ENST00000589050 PLB1Q6P1J6 1458 aa24.75■■□□□ 1.55
RPRD1A-208ENST00000589050 FMN1Q68DA7 1419 aa24.74■■□□□ 1.55
RPRD1A-208ENST00000589050 ABCA8O94911 1581 aa24.71■■□□□ 1.55
RPRD1A-208ENST00000589050 ABCC2Q92887 1545 aa24.7■■□□□ 1.54
RPRD1A-208ENST00000589050 UHRF1BP1LA0JNW5 1464 aa24.7■■□□□ 1.54
RPRD1A-208ENST00000589050 ADCY10Q96PN6 1610 aa24.69■■□□□ 1.54
RPRD1A-208ENST00000589050 RAPGEF6Q8TEU7 1601 aa24.66■■□□□ 1.54
RPRD1A-208ENST00000589050 NPM1P06748 294 aaKnown RBP eCLIP24.62■■□□□ 1.53
RPRD1A-208ENST00000589050 ATP1B4Q9UN42 357 aaPredicted RBP24.6■■□□□ 1.53
RPRD1A-208ENST00000589050 NUP153P49790 1475 aaKnown RBP24.59■■□□□ 1.53
RPRD1A-208ENST00000589050 ARID3CA6NKF2 412 aa24.59■■□□□ 1.53
RPRD1A-208ENST00000589050 CASKIN1Q8WXD9 1431 aa24.59■■□□□ 1.53
RPRD1A-208ENST00000589050 PCF11O94913 1555 aaKnown RBP24.59■■□□□ 1.53
RPRD1A-208ENST00000589050 KDM5BQ9UGL1 1544 aa24.57■■□□□ 1.52
RPRD1A-208ENST00000589050 HECW1Q76N89 1606 aa24.57■■□□□ 1.52
RPRD1A-208ENST00000589050 VPS8Q8N3P4 1428 aa24.56■■□□□ 1.52
RPRD1A-208ENST00000589050 FYCO1Q9BQS8 1478 aa24.54■■□□□ 1.52
RPRD1A-208ENST00000589050 ATP10BO94823 1461 aa24.52■■□□□ 1.52
RPRD1A-208ENST00000589050 ZCCHC11Q5TAX3 1644 aaKnown RBP24.52■■□□□ 1.52
RPRD1A-208ENST00000589050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.51■■□□□ 1.51
RPRD1A-208ENST00000589050 HNRNPUL2Q1KMD3 747 aaKnown RBP24.51■■□□□ 1.51
RPRD1A-208ENST00000589050 EPRSP07814 1512 aaKnown RBP24.49■■□□□ 1.51
RPRD1A-208ENST00000589050 CDK13Q14004 1512 aaKnown RBP24.46■■□□□ 1.51
RPRD1A-208ENST00000589050 MAPKBP1O60336 1514 aa24.45■■□□□ 1.51
RPRD1A-208ENST00000589050 CCDC18Q5T9S5 1454 aa24.44■■□□□ 1.5
RPRD1A-208ENST00000589050 ASXL2Q76L83 1435 aa24.44■■□□□ 1.5
RPRD1A-208ENST00000589050 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
RPRD1A-208ENST00000589050 WDR7Q9Y4E6 1490 aa24.38■■□□□ 1.49
RPRD1A-208ENST00000589050 PLEKHD1A6NEE1 506 aa24.37■■□□□ 1.49
RPRD1A-208ENST00000589050 CDK11AQ9UQ88 783 aaPredicted RBP24.37■■□□□ 1.49
RPRD1A-208ENST00000589050 APLP2Q06481 763 aa24.31■■□□□ 1.48
RPRD1A-208ENST00000589050 KCNH8Q96L42 1107 aa24.31■■□□□ 1.48
RPRD1A-208ENST00000589050 ABCC10Q5T3U5 1492 aa24.3■■□□□ 1.48
RPRD1A-208ENST00000589050 TIAM1Q13009 1591 aa24.29■■□□□ 1.48
RPRD1A-208ENST00000589050 TRHP20396 242 aaPredicted RBP24.29■■□□□ 1.48
RPRD1A-208ENST00000589050 CFAP43Q8NDM7 1665 aa24.28■■□□□ 1.48
RPRD1A-208ENST00000589050 TROQ12816 1431 aaPredicted RBP24.27■■□□□ 1.48
RPRD1A-208ENST00000589050 MAP3K1Q13233 1512 aa24.27■■□□□ 1.48
RPRD1A-208ENST00000589050 MAGI3Q5TCQ9 1506 aa24.27■■□□□ 1.48
RPRD1A-208ENST00000589050 FAM69CQ0P6D2 419 aa24.27■■□□□ 1.48
RPRD1A-208ENST00000589050 DIP2BQ9P265 1576 aa24.26■■□□□ 1.47
RPRD1A-208ENST00000589050 MTUS2Q5JR59 1369 aa24.25■■□□□ 1.47
RPRD1A-208ENST00000589050 GLI2P10070 1586 aa24.2■■□□□ 1.47
RPRD1A-208ENST00000589050 EHBP1L1Q8N3D4 1523 aa24.2■■□□□ 1.47
RPRD1A-208ENST00000589050 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
RPRD1A-208ENST00000589050 KANK4Q5T7N3 995 aaPredicted RBP24.19■■□□□ 1.46
RPRD1A-208ENST00000589050 KIF14Q15058 1648 aa24.18■■□□□ 1.46
RPRD1A-208ENST00000589050 KIF13AQ9H1H9 1805 aa24.17■■□□□ 1.46
RPRD1A-208ENST00000589050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.15■■□□□ 1.462e-9■■■□□ 19.1
RPRD1A-208ENST00000589050 ABCA9Q8IUA7 1624 aa24.14■■□□□ 1.46
RPRD1A-208ENST00000589050 TTC37Q6PGP7 1564 aa24.12■■□□□ 1.45
RPRD1A-208ENST00000589050 CD109Q6YHK3 1445 aa24.11■■□□□ 1.45
RPRD1A-208ENST00000589050 MAP3K4Q9Y6R4 1608 aa24.1■■□□□ 1.45
RPRD1A-208ENST00000589050 SUPT6HQ7KZ85 1726 aaKnown RBP24.07■■□□□ 1.44
RPRD1A-208ENST00000589050 NCOA2Q15596 1464 aa24.07■■□□□ 1.44
RPRD1A-208ENST00000589050 PPARGC1BQ86YN6 1023 aaKnown RBP24.05■■□□□ 1.44
RPRD1A-208ENST00000589050 CCNB3Q8WWL7 1395 aa24.03■■□□□ 1.44
RPRD1A-208ENST00000589050 PLCH2O75038 1416 aa24.01■■□□□ 1.43
RPRD1A-208ENST00000589050 TSPOAP1O95153 1857 aa24■■□□□ 1.43
RPRD1A-208ENST00000589050 TEX14Q8IWB6 1497 aa24■■□□□ 1.43
RPRD1A-208ENST00000589050 PPRC1Q5VV67 1664 aaKnown RBP23.99■■□□□ 1.43
RPRD1A-208ENST00000589050 MYO5CQ9NQX4 1742 aa23.99■■□□□ 1.43
RPRD1A-208ENST00000589050 GPATCH8Q9UKJ3 1502 aaKnown RBP23.99■■□□□ 1.43
RPRD1A-208ENST00000589050 ARHGAP5Q13017 1502 aa23.96■■□□□ 1.43
RPRD1A-208ENST00000589050 ARAP3Q8WWN8 1544 aa23.96■■□□□ 1.43
RPRD1A-208ENST00000589050 PREX2Q70Z35 1606 aa23.95■■□□□ 1.43
RPRD1A-208ENST00000589050 FANCAO15360 1455 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms