RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 NISCHQ9Y2I1 1504 aa36.75■■■■□ 3.47
RPRD1A-208ENST00000589050 CCDC180Q9P1Z9 1646 aa32.44■■■□□ 2.78
RPRD1A-208ENST00000589050 ABCC9O60706 1549 aa31.41■■■□□ 2.62
RPRD1A-208ENST00000589050 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.5
RPRD1A-208ENST00000589050 DCAF8L2P0C7V8 631 aa30.61■■■□□ 2.49
RPRD1A-208ENST00000589050 NACADO15069 1562 aa30.42■■■□□ 2.46
RPRD1A-208ENST00000589050 DCAF1Q9Y4B6 1507 aa30.4■■■□□ 2.46
RPRD1A-208ENST00000589050 MYO15BQ96JP2 1530 aa30.37■■■□□ 2.45
RPRD1A-208ENST00000589050 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
RPRD1A-208ENST00000589050 SCRIBQ14160 1630 aa29.7■■■□□ 2.34
RPRD1A-208ENST00000589050 UNC13AQ9UPW8 1703 aa29.61■■■□□ 2.33
RPRD1A-208ENST00000589050 PABPN1Q86U42 306 aaKnown RBP eCLIP29.44■■■□□ 2.3
RPRD1A-208ENST00000589050 BICRAQ9NZM4 1560 aa29.42■■■□□ 2.3
RPRD1A-208ENST00000589050 SHROOM4Q9ULL8 1493 aa29.36■■■□□ 2.29
RPRD1A-208ENST00000589050 EIF4G1Q04637 1599 aaKnown RBP28.62■■■□□ 2.17
RPRD1A-208ENST00000589050 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
RPRD1A-208ENST00000589050 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.14
RPRD1A-208ENST00000589050 DNAJC5BQ9UF47 199 aa28.43■■■□□ 2.14
RPRD1A-208ENST00000589050 SMARCA4P51532 1647 aa28.42■■■□□ 2.14
RPRD1A-208ENST00000589050 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
RPRD1A-208ENST00000589050 MROH2BQ7Z745 1585 aa28.33■■■□□ 2.13
RPRD1A-208ENST00000589050 ATAD2BQ9ULI0 1458 aa28.17■■■□□ 2.1
RPRD1A-208ENST00000589050 RSF1Q96T23 1441 aaPredicted RBP28.17■■■□□ 2.1
RPRD1A-208ENST00000589050 SMARCA2P51531 1590 aa28.15■■■□□ 2.1
RPRD1A-208ENST00000589050 PEG3Q9GZU2 1588 aa28.11■■■□□ 2.09
RPRD1A-208ENST00000589050 NCAPD3P42695 1498 aa28.08■■■□□ 2.09
RPRD1A-208ENST00000589050 WIZO95785 1651 aa28.04■■■□□ 2.08
RPRD1A-208ENST00000589050 HMGXB3Q12766 1538 aa27.97■■■□□ 2.07
RPRD1A-208ENST00000589050 BAZ1BQ9UIG0 1483 aaKnown RBP27.97■■■□□ 2.07
RPRD1A-208ENST00000589050 SUPT5HO00267 1087 aaKnown RBP27.83■■■□□ 2.05
RPRD1A-208ENST00000589050 TOP2AP11388 1531 aaKnown RBP27.77■■■□□ 2.04
RPRD1A-208ENST00000589050 AEBP2Q6ZN18 517 aaPredicted RBP27.61■■■□□ 2.01
RPRD1A-208ENST00000589050 CCDC88BA6NC98 1476 aa27.46■■□□□ 1.99
RPRD1A-208ENST00000589050 CADPSQ9ULU8 1353 aa27.3■■□□□ 1.96
RPRD1A-208ENST00000589050 NESP48681 1621 aa27.3■■□□□ 1.96
RPRD1A-208ENST00000589050 LAMC3Q9Y6N6 1575 aa27.26■■□□□ 1.95
RPRD1A-208ENST00000589050 CFTRP13569 1480 aa27.21■■□□□ 1.95
RPRD1A-208ENST00000589050 PDS5BQ9NTI5 1447 aa27.09■■□□□ 1.93
RPRD1A-208ENST00000589050 ERCC6Q03468 1493 aa27.05■■□□□ 1.92
RPRD1A-208ENST00000589050 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
RPRD1A-208ENST00000589050 PRDM2Q13029 1718 aa26.97■■□□□ 1.91
RPRD1A-208ENST00000589050 KIF21AQ7Z4S6 1674 aa26.94■■□□□ 1.9
RPRD1A-208ENST00000589050 CEP164Q9UPV0 1460 aa26.92■■□□□ 1.9
RPRD1A-208ENST00000589050 MRC2Q9UBG0 1479 aa26.79■■□□□ 1.88
RPRD1A-208ENST00000589050 THOC2Q8NI27 1593 aaKnown RBP26.76■■□□□ 1.87
RPRD1A-208ENST00000589050 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
RPRD1A-208ENST00000589050 WDR62O43379 1518 aa26.67■■□□□ 1.86
RPRD1A-208ENST00000589050 ABCC8Q09428 1581 aa26.61■■□□□ 1.85
RPRD1A-208ENST00000589050 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
RPRD1A-208ENST00000589050 DNMBPQ6XZF7 1577 aa26.6■■□□□ 1.85
RPRD1A-208ENST00000589050 CUX2O14529 1486 aa26.57■■□□□ 1.84
RPRD1A-208ENST00000589050 CUX1P39880 1505 aa26.56■■□□□ 1.84
RPRD1A-208ENST00000589050 WRNQ14191 1432 aaPredicted RBP eCLIP26.56■■□□□ 1.84
RPRD1A-208ENST00000589050 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
RPRD1A-208ENST00000589050 TOP2BQ02880 1626 aa26.43■■□□□ 1.82
RPRD1A-208ENST00000589050 FGD5Q6ZNL6 1462 aa26.42■■□□□ 1.82
RPRD1A-208ENST00000589050 POLA1P09884 1462 aaPredicted RBP26.41■■□□□ 1.82
RPRD1A-208ENST00000589050 BIVM-ERCC5R4GMW8 1640 aa26.4■■□□□ 1.82
RPRD1A-208ENST00000589050 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
RPRD1A-208ENST00000589050 IFT140Q96RY7 1462 aa26.33■■□□□ 1.81
RPRD1A-208ENST00000589050 SOGA1O94964 1423 aa26.32■■□□□ 1.8
RPRD1A-208ENST00000589050 RAD54L2Q9Y4B4 1467 aa26.3■■□□□ 1.8
RPRD1A-208ENST00000589050 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
RPRD1A-208ENST00000589050 TRIM41Q8WV44 630 aa26.25■■□□□ 1.79
RPRD1A-208ENST00000589050 ZNF608Q9ULD9 1512 aaPredicted RBP26.18■■□□□ 1.78
RPRD1A-208ENST00000589050 ABCA10Q8WWZ4 1543 aa26.16■■□□□ 1.78
RPRD1A-208ENST00000589050 TDRD9Q8NDG6 1382 aaKnown RBP26.13■■□□□ 1.77
RPRD1A-208ENST00000589050 WDR97A6NE52 1622 aa26.13■■□□□ 1.77
RPRD1A-208ENST00000589050 AQRO60306 1485 aaKnown RBP eCLIP26.1■■□□□ 1.77
RPRD1A-208ENST00000589050 EIF4G3O43432 1585 aaKnown RBP26.08■■□□□ 1.77
RPRD1A-208ENST00000589050 GAPVD1Q14C86 1478 aa26.01■■□□□ 1.75
RPRD1A-208ENST00000589050 ABCA5Q8WWZ7 1642 aa26.01■■□□□ 1.75
RPRD1A-208ENST00000589050 KIF27Q86VH2 1401 aa25.97■■□□□ 1.75
RPRD1A-208ENST00000589050 GRIN2BQ13224 1484 aa25.95■■□□□ 1.74
RPRD1A-208ENST00000589050 PBRM1Q86U86 1689 aa25.89■■□□□ 1.73
RPRD1A-208ENST00000589050 SNAPC4Q5SXM2 1469 aa25.87■■□□□ 1.73
RPRD1A-208ENST00000589050 RUSC2Q8N2Y8 1516 aa25.87■■□□□ 1.73
RPRD1A-208ENST00000589050 ERICH3Q5RHP9 1530 aa25.85■■□□□ 1.73
RPRD1A-208ENST00000589050 MAGI1Q96QZ7 1491 aaPredicted RBP25.83■■□□□ 1.73
RPRD1A-208ENST00000589050 IGF1RP08069 1367 aa25.81■■□□□ 1.72
RPRD1A-208ENST00000589050 EEA1Q15075 1411 aa25.75■■□□□ 1.71
RPRD1A-208ENST00000589050 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
RPRD1A-208ENST00000589050 FHAD1B1AJZ9 1412 aa25.73■■□□□ 1.71
RPRD1A-208ENST00000589050 FBLN2P98095 1184 aa25.73■■□□□ 1.71
RPRD1A-208ENST00000589050 SYNJ2O15056 1496 aa25.72■■□□□ 1.71
RPRD1A-208ENST00000589050 FAM9AQ8IZU1 332 aaPredicted RBP25.72■■□□□ 1.71
RPRD1A-208ENST00000589050 CHMP7Q8WUX9 453 aaPredicted RBP25.71■■□□□ 1.71
RPRD1A-208ENST00000589050 CUL7Q14999 1698 aa25.69■■□□□ 1.7
RPRD1A-208ENST00000589050 CARMIL1Q5VZK9 1371 aa25.68■■□□□ 1.7
RPRD1A-208ENST00000589050 CSRNP3Q8WYN3 585 aa25.67■■□□□ 1.7
RPRD1A-208ENST00000589050 CHD1O14646 1710 aa25.64■■□□□ 1.7
RPRD1A-208ENST00000589050 GRIN2AQ12879 1464 aa25.61■■□□□ 1.69
RPRD1A-208ENST00000589050 OSCARQ8IYS5 282 aa25.57■■□□□ 1.68
RPRD1A-208ENST00000589050 PRXQ9BXM0 1461 aa25.57■■□□□ 1.68
RPRD1A-208ENST00000589050 RAPGEF2Q9Y4G8 1499 aa25.56■■□□□ 1.68
RPRD1A-208ENST00000589050 NUP160Q12769 1436 aa25.47■■□□□ 1.67
RPRD1A-208ENST00000589050 CEP170Q5SW79 1584 aa25.46■■□□□ 1.67
RPRD1A-208ENST00000589050 KIF21BO75037 1637 aa25.44■■□□□ 1.66
RPRD1A-208ENST00000589050 CLASP1Q7Z460 1538 aa25.4■■□□□ 1.66
RPRD1A-208ENST00000589050 EHMT2Q96KQ7 1210 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms