RNA–Protein interactions for RNA: ENST00000589039.5

GCDH-209, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-209ENST00000589039 GOLGA3Q08378 1498 aa25.36■■□□□ 1.65
GCDH-209ENST00000589039 KIAA0586Q9BVV6 1533 aa25.32■■□□□ 1.64
GCDH-209ENST00000589039 SHROOM2Q13796 1616 aa25.3■■□□□ 1.64
GCDH-209ENST00000589039 IQGAP2Q13576 1575 aa25.29■■□□□ 1.64
GCDH-209ENST00000589039 EHMT2Q96KQ7 1210 aa25.21■■□□□ 1.63
GCDH-209ENST00000589039 UBTFP17480 764 aaKnown RBP25.19■■□□□ 1.62
GCDH-209ENST00000589039 UGGT2Q9NYU1 1516 aa25.16■■□□□ 1.62
GCDH-209ENST00000589039 JPH4Q96JJ6 628 aa25.15■■□□□ 1.62
GCDH-209ENST00000589039 RIMBP3CA6NJZ7 1639 aa25.14■■□□□ 1.61
GCDH-209ENST00000589039 RIMBP3BA6NNM3 1639 aa25.14■■□□□ 1.61
GCDH-209ENST00000589039 RIMBP3Q9UFD9 1639 aa25.14■■□□□ 1.61
GCDH-209ENST00000589039 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
GCDH-209ENST00000589039 TNIKQ9UKE5 1360 aa25.11■■□□□ 1.61
GCDH-209ENST00000589039 PRG4Q92954 1404 aaPredicted RBP25.09■■□□□ 1.61
GCDH-209ENST00000589039 ERCC6L2Q5T890 1561 aa25.09■■□□□ 1.61
GCDH-209ENST00000589039 LOC105371045A0A1W2PR82 267 aa25.08■■□□□ 1.61
GCDH-209ENST00000589039 SAMD9Q5K651 1589 aa25.05■■□□□ 1.6
GCDH-209ENST00000589039 KIAA0556O60303 1618 aa25.05■■□□□ 1.6
GCDH-209ENST00000589039 DISP1Q96F81 1524 aa25.04■■□□□ 1.6
GCDH-209ENST00000589039 CARMIL2Q6F5E8 1435 aa25.03■■□□□ 1.6
GCDH-209ENST00000589039 EFCAB5A4FU69 1503 aa25.01■■□□□ 1.59
GCDH-209ENST00000589039 ARAP1Q96P48 1450 aa24.96■■□□□ 1.59
GCDH-209ENST00000589039 RANGAP1P46060 587 aaPredicted RBP24.94■■□□□ 1.58
GCDH-209ENST00000589039 ARHGAP35Q9NRY4 1499 aa24.91■■□□□ 1.58
GCDH-209ENST00000589039 CLIP1P30622 1438 aa24.9■■□□□ 1.58
GCDH-209ENST00000589039 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
GCDH-209ENST00000589039 P3H3Q8IVL6 736 aa24.84■■□□□ 1.57
GCDH-209ENST00000589039 PTPRGP23470 1445 aa24.84■■□□□ 1.57
GCDH-209ENST00000589039 FHOD3Q2V2M9 1422 aa24.84■■□□□ 1.57
GCDH-209ENST00000589039 CYB5RLQ6IPT4 315 aa24.75■■□□□ 1.55
GCDH-209ENST00000589039 TTBK1Q5TCY1 1321 aaPredicted RBP24.75■■□□□ 1.55
GCDH-209ENST00000589039 ABCA8O94911 1581 aa24.74■■□□□ 1.55
GCDH-209ENST00000589039 FMN1Q68DA7 1419 aa24.73■■□□□ 1.55
GCDH-209ENST00000589039 ADCY10Q96PN6 1610 aa24.72■■□□□ 1.55
GCDH-209ENST00000589039 RAPGEF6Q8TEU7 1601 aa24.72■■□□□ 1.55
GCDH-209ENST00000589039 UACAQ9BZF9 1416 aa24.7■■□□□ 1.55
GCDH-209ENST00000589039 ABCC2Q92887 1545 aa24.7■■□□□ 1.54
GCDH-209ENST00000589039 PLB1Q6P1J6 1458 aa24.7■■□□□ 1.54
GCDH-209ENST00000589039 UHRF1BP1LA0JNW5 1464 aa24.69■■□□□ 1.54
GCDH-209ENST00000589039 PCF11O94913 1555 aaKnown RBP24.63■■□□□ 1.53
GCDH-209ENST00000589039 HECW1Q76N89 1606 aa24.62■■□□□ 1.53
GCDH-209ENST00000589039 CASKIN1Q8WXD9 1431 aa24.59■■□□□ 1.53
GCDH-209ENST00000589039 LRRIQ1Q96JM4 1722 aa24.58■■□□□ 1.53
GCDH-209ENST00000589039 VPS8Q8N3P4 1428 aa24.58■■□□□ 1.53
GCDH-209ENST00000589039 NUP153P49790 1475 aaKnown RBP24.58■■□□□ 1.52
GCDH-209ENST00000589039 FYCO1Q9BQS8 1478 aa24.58■■□□□ 1.52
GCDH-209ENST00000589039 ZCCHC11Q5TAX3 1644 aaKnown RBP24.57■■□□□ 1.52
GCDH-209ENST00000589039 KDM5BQ9UGL1 1544 aa24.56■■□□□ 1.52
GCDH-209ENST00000589039 ATP10BO94823 1461 aa24.49■■□□□ 1.51
GCDH-209ENST00000589039 EPRSP07814 1512 aaKnown RBP24.49■■□□□ 1.51
GCDH-209ENST00000589039 NPM1P06748 294 aaKnown RBP eCLIP24.48■■□□□ 1.51
GCDH-209ENST00000589039 MAPKBP1O60336 1514 aa24.46■■□□□ 1.51
GCDH-209ENST00000589039 CCDC18Q5T9S5 1454 aa24.46■■□□□ 1.51
GCDH-209ENST00000589039 ATP1B4Q9UN42 357 aaPredicted RBP24.46■■□□□ 1.51
GCDH-209ENST00000589039 CDK13Q14004 1512 aaKnown RBP24.45■■□□□ 1.5
GCDH-209ENST00000589039 CFAP43Q8NDM7 1665 aa24.42■■□□□ 1.5
GCDH-209ENST00000589039 ARID3CA6NKF2 412 aa24.41■■□□□ 1.5
GCDH-209ENST00000589039 ASXL2Q76L83 1435 aa24.37■■□□□ 1.49
GCDH-209ENST00000589039 KIF13AQ9H1H9 1805 aa24.37■■□□□ 1.49
GCDH-209ENST00000589039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.36■■□□□ 1.49
GCDH-209ENST00000589039 HNRNPUL2Q1KMD3 747 aaKnown RBP24.36■■□□□ 1.49
GCDH-209ENST00000589039 TIAM1Q13009 1591 aa24.36■■□□□ 1.49
GCDH-209ENST00000589039 MAP3K1Q13233 1512 aa24.35■■□□□ 1.49
GCDH-209ENST00000589039 WDR7Q9Y4E6 1490 aa24.34■■□□□ 1.49
GCDH-209ENST00000589039 DIP2BQ9P265 1576 aa24.32■■□□□ 1.48
GCDH-209ENST00000589039 CDK11AQ9UQ88 783 aaPredicted RBP24.3■■□□□ 1.48
GCDH-209ENST00000589039 PLEKHD1A6NEE1 506 aa24.29■■□□□ 1.48
GCDH-209ENST00000589039 MAGI3Q5TCQ9 1506 aa24.28■■□□□ 1.48
GCDH-209ENST00000589039 TROQ12816 1431 aaPredicted RBP24.26■■□□□ 1.47
GCDH-209ENST00000589039 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
GCDH-209ENST00000589039 APLP2Q06481 763 aa24.25■■□□□ 1.47
GCDH-209ENST00000589039 EHBP1L1Q8N3D4 1523 aa24.25■■□□□ 1.47
GCDH-209ENST00000589039 GLI2P10070 1586 aa24.23■■□□□ 1.47
GCDH-209ENST00000589039 KIF14Q15058 1648 aa24.22■■□□□ 1.47
GCDH-209ENST00000589039 LRRC9Q6ZRR7 1453 aa24.21■■□□□ 1.47
GCDH-209ENST00000589039 MTUS2Q5JR59 1369 aa24.2■■□□□ 1.46
GCDH-209ENST00000589039 ABCA9Q8IUA7 1624 aa24.19■■□□□ 1.46
GCDH-209ENST00000589039 MAP3K4Q9Y6R4 1608 aa24.18■■□□□ 1.46
GCDH-209ENST00000589039 SUPT6HQ7KZ85 1726 aaKnown RBP24.18■■□□□ 1.46
GCDH-209ENST00000589039 KCNH8Q96L42 1107 aa24.17■■□□□ 1.46
GCDH-209ENST00000589039 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.15■■□□□ 1.46
GCDH-209ENST00000589039 TRHP20396 242 aaPredicted RBP24.15■■□□□ 1.46
GCDH-209ENST00000589039 TTC37Q6PGP7 1564 aa24.14■■□□□ 1.45
GCDH-209ENST00000589039 PPRC1Q5VV67 1664 aaKnown RBP24.14■■□□□ 1.45
GCDH-209ENST00000589039 FAM69CQ0P6D2 419 aa24.13■■□□□ 1.45
GCDH-209ENST00000589039 KANK4Q5T7N3 995 aaPredicted RBP24.13■■□□□ 1.45
GCDH-209ENST00000589039 MYO5CQ9NQX4 1742 aa24.12■■□□□ 1.45
GCDH-209ENST00000589039 TSPOAP1O95153 1857 aa24.11■■□□□ 1.45
GCDH-209ENST00000589039 CDC42BPAQ5VT25 1732 aa24.09■■□□□ 1.45
GCDH-209ENST00000589039 NCOA2Q15596 1464 aa24.06■■□□□ 1.44
GCDH-209ENST00000589039 ITSN2Q9NZM3 1697 aa24.05■■□□□ 1.44
GCDH-209ENST00000589039 CDC42BPBQ9Y5S2 1711 aa24.04■■□□□ 1.44
GCDH-209ENST00000589039 CD109Q6YHK3 1445 aa24.04■■□□□ 1.44
GCDH-209ENST00000589039 PREX2Q70Z35 1606 aa24.04■■□□□ 1.44
GCDH-209ENST00000589039 ARAP3Q8WWN8 1544 aa24.01■■□□□ 1.43
GCDH-209ENST00000589039 PLCH2O75038 1416 aa23.99■■□□□ 1.43
GCDH-209ENST00000589039 CCNB3Q8WWL7 1395 aa23.98■■□□□ 1.43
GCDH-209ENST00000589039 GPATCH8Q9UKJ3 1502 aaKnown RBP23.98■■□□□ 1.43
GCDH-209ENST00000589039 CFAP74Q9C0B2 1584 aa23.97■■□□□ 1.43
GCDH-209ENST00000589039 TEX14Q8IWB6 1497 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms