RNA–Protein interactions for RNA: ENST00000589039.5

GCDH-209, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-209ENST00000589039 NISCHQ9Y2I1 1504 aa36.77■■■■□ 3.48
GCDH-209ENST00000589039 CCDC180Q9P1Z9 1646 aa32.59■■■□□ 2.81
GCDH-209ENST00000589039 ABCC9O60706 1549 aa31.29■■■□□ 2.6
GCDH-209ENST00000589039 ZCCHC6Q5VYS8 1495 aaKnown RBP30.74■■■□□ 2.51
GCDH-209ENST00000589039 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
GCDH-209ENST00000589039 NACADO15069 1562 aa30.45■■■□□ 2.47
GCDH-209ENST00000589039 MYO15BQ96JP2 1530 aa30.44■■■□□ 2.46
GCDH-209ENST00000589039 DCAF8L2P0C7V8 631 aa30.41■■■□□ 2.46
GCDH-209ENST00000589039 RB1CC1Q8TDY2 1594 aa30.38■■■□□ 2.45
GCDH-209ENST00000589039 UNC13AQ9UPW8 1703 aa29.88■■■□□ 2.37
GCDH-209ENST00000589039 SCRIBQ14160 1630 aa29.69■■■□□ 2.34
GCDH-209ENST00000589039 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
GCDH-209ENST00000589039 PABPN1Q86U42 306 aaKnown RBP eCLIP29.26■■■□□ 2.27
GCDH-209ENST00000589039 SHROOM4Q9ULL8 1493 aa29.23■■■□□ 2.27
GCDH-209ENST00000589039 EIF4G1Q04637 1599 aaKnown RBP28.62■■■□□ 2.17
GCDH-209ENST00000589039 CECR2Q9BXF3 1484 aa28.56■■■□□ 2.16
GCDH-209ENST00000589039 BAZ1AQ9NRL2 1556 aaPredicted RBP28.49■■■□□ 2.15
GCDH-209ENST00000589039 SMARCA4P51532 1647 aa28.47■■■□□ 2.15
GCDH-209ENST00000589039 CC2D2AQ9P2K1 1620 aa28.41■■■□□ 2.14
GCDH-209ENST00000589039 DNAJC5BQ9UF47 199 aa28.37■■■□□ 2.13
GCDH-209ENST00000589039 MROH2BQ7Z745 1585 aa28.33■■■□□ 2.13
GCDH-209ENST00000589039 PEG3Q9GZU2 1588 aa28.2■■■□□ 2.1
GCDH-209ENST00000589039 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
GCDH-209ENST00000589039 RSF1Q96T23 1441 aaPredicted RBP28.16■■■□□ 2.1
GCDH-209ENST00000589039 ATAD2BQ9ULI0 1458 aa28.14■■■□□ 2.09
GCDH-209ENST00000589039 WIZO95785 1651 aa28.1■■■□□ 2.09
GCDH-209ENST00000589039 NCAPD3P42695 1498 aa28.05■■■□□ 2.08
GCDH-209ENST00000589039 HMGXB3Q12766 1538 aa28.01■■■□□ 2.07
GCDH-209ENST00000589039 BAZ1BQ9UIG0 1483 aaKnown RBP27.94■■■□□ 2.06
GCDH-209ENST00000589039 TOP2AP11388 1531 aaKnown RBP27.82■■■□□ 2.04
GCDH-209ENST00000589039 SUPT5HO00267 1087 aaKnown RBP27.73■■■□□ 2.03
GCDH-209ENST00000589039 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
GCDH-209ENST00000589039 LAMC3Q9Y6N6 1575 aa27.3■■□□□ 1.96
GCDH-209ENST00000589039 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
GCDH-209ENST00000589039 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
GCDH-209ENST00000589039 NESP48681 1621 aa27.23■■□□□ 1.95
GCDH-209ENST00000589039 CFTRP13569 1480 aa27.2■■□□□ 1.95
GCDH-209ENST00000589039 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.92
GCDH-209ENST00000589039 PDS5BQ9NTI5 1447 aa27.03■■□□□ 1.92
GCDH-209ENST00000589039 FANCD2Q9BXW9 1451 aa26.94■■□□□ 1.9
GCDH-209ENST00000589039 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
GCDH-209ENST00000589039 THOC2Q8NI27 1593 aaKnown RBP26.89■■□□□ 1.9
GCDH-209ENST00000589039 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
GCDH-209ENST00000589039 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
GCDH-209ENST00000589039 WDR62O43379 1518 aa26.7■■□□□ 1.86
GCDH-209ENST00000589039 URB2Q14146 1524 aaKnown RBP26.66■■□□□ 1.86
GCDH-209ENST00000589039 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
GCDH-209ENST00000589039 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
GCDH-209ENST00000589039 TOPBP1Q92547 1522 aa26.59■■□□□ 1.85
GCDH-209ENST00000589039 CUX1P39880 1505 aa26.56■■□□□ 1.84
GCDH-209ENST00000589039 CUX2O14529 1486 aa26.55■■□□□ 1.84
GCDH-209ENST00000589039 WRNQ14191 1432 aaPredicted RBP eCLIP26.54■■□□□ 1.84
GCDH-209ENST00000589039 BIVM-ERCC5R4GMW8 1640 aa26.53■■□□□ 1.84
GCDH-209ENST00000589039 TOP2BQ02880 1626 aa26.5■■□□□ 1.83
GCDH-209ENST00000589039 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
GCDH-209ENST00000589039 FGD5Q6ZNL6 1462 aa26.39■■□□□ 1.82
GCDH-209ENST00000589039 POLA1P09884 1462 aaPredicted RBP26.38■■□□□ 1.81
GCDH-209ENST00000589039 WDR97A6NE52 1622 aa26.3■■□□□ 1.8
GCDH-209ENST00000589039 TARBP1Q13395 1621 aaKnown RBP26.3■■□□□ 1.8
GCDH-209ENST00000589039 IFT140Q96RY7 1462 aa26.3■■□□□ 1.8
GCDH-209ENST00000589039 SOGA1O94964 1423 aa26.25■■□□□ 1.79
GCDH-209ENST00000589039 RAD54L2Q9Y4B4 1467 aa26.24■■□□□ 1.79
GCDH-209ENST00000589039 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
GCDH-209ENST00000589039 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
GCDH-209ENST00000589039 ABCA10Q8WWZ4 1543 aa26.17■■□□□ 1.78
GCDH-209ENST00000589039 EIF4G3O43432 1585 aaKnown RBP26.14■■□□□ 1.78
GCDH-209ENST00000589039 ZNF608Q9ULD9 1512 aaPredicted RBP26.12■■□□□ 1.77
GCDH-209ENST00000589039 DNAJC5Q9H3Z4 198 aa26.08■■□□□ 1.77
GCDH-209ENST00000589039 ABCA5Q8WWZ7 1642 aa26.07■■□□□ 1.76
GCDH-209ENST00000589039 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
GCDH-209ENST00000589039 AQRO60306 1485 aaKnown RBP eCLIP26.02■■□□□ 1.76
GCDH-209ENST00000589039 PBRM1Q86U86 1689 aa26.02■■□□□ 1.76
GCDH-209ENST00000589039 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
GCDH-209ENST00000589039 KIF27Q86VH2 1401 aa25.95■■□□□ 1.74
GCDH-209ENST00000589039 GRIN2BQ13224 1484 aa25.91■■□□□ 1.74
GCDH-209ENST00000589039 ERICH3Q5RHP9 1530 aa25.88■■□□□ 1.73
GCDH-209ENST00000589039 RUSC2Q8N2Y8 1516 aa25.85■■□□□ 1.73
GCDH-209ENST00000589039 MAGI1Q96QZ7 1491 aaPredicted RBP25.82■■□□□ 1.72
GCDH-209ENST00000589039 SNAPC4Q5SXM2 1469 aa25.81■■□□□ 1.72
GCDH-209ENST00000589039 CUL7Q14999 1698 aa25.79■■□□□ 1.72
GCDH-209ENST00000589039 EEA1Q15075 1411 aa25.79■■□□□ 1.72
GCDH-209ENST00000589039 ADAMTS12P58397 1594 aa25.78■■□□□ 1.72
GCDH-209ENST00000589039 CHD1O14646 1710 aa25.78■■□□□ 1.72
GCDH-209ENST00000589039 IGF1RP08069 1367 aa25.76■■□□□ 1.71
GCDH-209ENST00000589039 SYNJ2O15056 1496 aa25.7■■□□□ 1.7
GCDH-209ENST00000589039 FHAD1B1AJZ9 1412 aa25.7■■□□□ 1.7
GCDH-209ENST00000589039 CSRNP3Q8WYN3 585 aa25.63■■□□□ 1.69
GCDH-209ENST00000589039 CARMIL1Q5VZK9 1371 aa25.63■■□□□ 1.69
GCDH-209ENST00000589039 FAM9AQ8IZU1 332 aaPredicted RBP25.6■■□□□ 1.69
GCDH-209ENST00000589039 GRIN2AQ12879 1464 aa25.6■■□□□ 1.69
GCDH-209ENST00000589039 CHMP7Q8WUX9 453 aaPredicted RBP25.59■■□□□ 1.69
GCDH-209ENST00000589039 PRXQ9BXM0 1461 aa25.58■■□□□ 1.69
GCDH-209ENST00000589039 FBLN2P98095 1184 aa25.56■■□□□ 1.68
GCDH-209ENST00000589039 RAPGEF2Q9Y4G8 1499 aa25.55■■□□□ 1.68
GCDH-209ENST00000589039 KIF21BO75037 1637 aa25.54■■□□□ 1.68
GCDH-209ENST00000589039 CEP170Q5SW79 1584 aa25.47■■□□□ 1.67
GCDH-209ENST00000589039 NUP160Q12769 1436 aa25.46■■□□□ 1.67
GCDH-209ENST00000589039 OSCARQ8IYS5 282 aa25.45■■□□□ 1.66
GCDH-209ENST00000589039 CLASP1Q7Z460 1538 aa25.44■■□□□ 1.66
GCDH-209ENST00000589039 CTTNBP2Q8WZ74 1663 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms