RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 UBTFP17480 764 aaKnown RBP27.55■■■□□ 2
SCAMP4-211ENST00000588907 CLASP1Q7Z460 1538 aa27.52■■■□□ 2
SCAMP4-211ENST00000588907 IQGAP2Q13576 1575 aa27.52■■■□□ 2
SCAMP4-211ENST00000588907 TNIKQ9UKE5 1360 aa27.49■■□□□ 1.99
SCAMP4-211ENST00000588907 EHMT2Q96KQ7 1210 aa27.45■■□□□ 1.98
SCAMP4-211ENST00000588907 LOC105371045A0A1W2PR82 267 aa27.4■■□□□ 1.98
SCAMP4-211ENST00000588907 SHROOM2Q13796 1616 aa27.4■■□□□ 1.98
SCAMP4-211ENST00000588907 UGGT2Q9NYU1 1516 aa27.39■■□□□ 1.98
SCAMP4-211ENST00000588907 JPH4Q96JJ6 628 aa27.35■■□□□ 1.97
SCAMP4-211ENST00000588907 EFCAB5A4FU69 1503 aa27.33■■□□□ 1.97
SCAMP4-211ENST00000588907 CARMIL2Q6F5E8 1435 aa27.3■■□□□ 1.96
SCAMP4-211ENST00000588907 SAMD9Q5K651 1589 aa27.26■■□□□ 1.96
SCAMP4-211ENST00000588907 CEP162Q5TB80 1403 aa27.25■■□□□ 1.95
SCAMP4-211ENST00000588907 PRG4Q92954 1404 aaPredicted RBP27.25■■□□□ 1.95
SCAMP4-211ENST00000588907 CLIP1P30622 1438 aa27.24■■□□□ 1.95
SCAMP4-211ENST00000588907 KIAA0556O60303 1618 aa27.23■■□□□ 1.95
SCAMP4-211ENST00000588907 DISP1Q96F81 1524 aa27.21■■□□□ 1.95
SCAMP4-211ENST00000588907 ARHGAP35Q9NRY4 1499 aa27.17■■□□□ 1.94
SCAMP4-211ENST00000588907 RANGAP1P46060 587 aaPredicted RBP27.15■■□□□ 1.94
SCAMP4-211ENST00000588907 ARHGEF11O15085 1522 aa27.13■■□□□ 1.93
SCAMP4-211ENST00000588907 ERCC6L2Q5T890 1561 aa27.09■■□□□ 1.93
SCAMP4-211ENST00000588907 FHOD3Q2V2M9 1422 aa27.06■■□□□ 1.92
SCAMP4-211ENST00000588907 FMN1Q68DA7 1419 aa27.06■■□□□ 1.92
SCAMP4-211ENST00000588907 RIMBP3CA6NJZ7 1639 aa27.05■■□□□ 1.92
SCAMP4-211ENST00000588907 RIMBP3BA6NNM3 1639 aa27.05■■□□□ 1.92
SCAMP4-211ENST00000588907 RIMBP3Q9UFD9 1639 aa27.05■■□□□ 1.92
SCAMP4-211ENST00000588907 PTPRGP23470 1445 aa27.03■■□□□ 1.92
SCAMP4-211ENST00000588907 ARAP1Q96P48 1450 aa27.03■■□□□ 1.92
SCAMP4-211ENST00000588907 P3H3Q8IVL6 736 aa27.01■■□□□ 1.91
SCAMP4-211ENST00000588907 DNAJC5Q9H3Z4 198 aa27■■□□□ 1.91
SCAMP4-211ENST00000588907 VPS8Q8N3P4 1428 aa26.91■■□□□ 1.9
SCAMP4-211ENST00000588907 UACAQ9BZF9 1416 aa26.88■■□□□ 1.89
SCAMP4-211ENST00000588907 ABCA8O94911 1581 aa26.88■■□□□ 1.89
SCAMP4-211ENST00000588907 RAPGEF6Q8TEU7 1601 aa26.87■■□□□ 1.89
SCAMP4-211ENST00000588907 UHRF1BP1LA0JNW5 1464 aa26.87■■□□□ 1.89
SCAMP4-211ENST00000588907 FYCO1Q9BQS8 1478 aa26.87■■□□□ 1.89
SCAMP4-211ENST00000588907 CASKIN1Q8WXD9 1431 aa26.86■■□□□ 1.89
SCAMP4-211ENST00000588907 TTBK1Q5TCY1 1321 aaPredicted RBP26.86■■□□□ 1.89
SCAMP4-211ENST00000588907 ABCC2Q92887 1545 aa26.85■■□□□ 1.89
SCAMP4-211ENST00000588907 HECW1Q76N89 1606 aa26.84■■□□□ 1.89
SCAMP4-211ENST00000588907 PLB1Q6P1J6 1458 aa26.84■■□□□ 1.89
SCAMP4-211ENST00000588907 PCF11O94913 1555 aaKnown RBP26.82■■□□□ 1.88
SCAMP4-211ENST00000588907 CYB5RLQ6IPT4 315 aa26.78■■□□□ 1.88
SCAMP4-211ENST00000588907 ADCY10Q96PN6 1610 aa26.76■■□□□ 1.87
SCAMP4-211ENST00000588907 CCDC18Q5T9S5 1454 aa26.75■■□□□ 1.87
SCAMP4-211ENST00000588907 NUP153P49790 1475 aaKnown RBP26.74■■□□□ 1.87
SCAMP4-211ENST00000588907 KDM5BQ9UGL1 1544 aa26.7■■□□□ 1.86
SCAMP4-211ENST00000588907 EPRSP07814 1512 aaKnown RBP26.69■■□□□ 1.86
SCAMP4-211ENST00000588907 ATP1B4Q9UN42 357 aaPredicted RBP26.68■■□□□ 1.86
SCAMP4-211ENST00000588907 MAP3K1Q13233 1512 aa26.66■■□□□ 1.86
SCAMP4-211ENST00000588907 NPM1P06748 294 aaKnown RBP eCLIP26.66■■□□□ 1.86
SCAMP4-211ENST00000588907 APLP2Q06481 763 aa26.64■■□□□ 1.86
SCAMP4-211ENST00000588907 ZCCHC11Q5TAX3 1644 aaKnown RBP26.63■■□□□ 1.85
SCAMP4-211ENST00000588907 ATP10BO94823 1461 aa26.62■■□□□ 1.85
SCAMP4-211ENST00000588907 CFAP43Q8NDM7 1665 aa26.61■■□□□ 1.85
SCAMP4-211ENST00000588907 CDK11AQ9UQ88 783 aaPredicted RBP26.61■■□□□ 1.85
SCAMP4-211ENST00000588907 LRRIQ1Q96JM4 1722 aa26.6■■□□□ 1.85
SCAMP4-211ENST00000588907 TIAM1Q13009 1591 aa26.58■■□□□ 1.85
SCAMP4-211ENST00000588907 CDK13Q14004 1512 aaKnown RBP26.58■■□□□ 1.85
SCAMP4-211ENST00000588907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.56■■□□□ 1.84
SCAMP4-211ENST00000588907 HNRNPUL2Q1KMD3 747 aaKnown RBP26.56■■□□□ 1.84
SCAMP4-211ENST00000588907 MAPKBP1O60336 1514 aa26.55■■□□□ 1.84
SCAMP4-211ENST00000588907 ARID3CA6NKF2 412 aa26.51■■□□□ 1.83
SCAMP4-211ENST00000588907 PLEKHD1A6NEE1 506 aa26.5■■□□□ 1.83
SCAMP4-211ENST00000588907 EHBP1L1Q8N3D4 1523 aa26.49■■□□□ 1.83
SCAMP4-211ENST00000588907 WDR7Q9Y4E6 1490 aa26.48■■□□□ 1.83
SCAMP4-211ENST00000588907 ASXL2Q76L83 1435 aa26.47■■□□□ 1.83
SCAMP4-211ENST00000588907 MTUS2Q5JR59 1369 aa26.46■■□□□ 1.83
SCAMP4-211ENST00000588907 LRRC9Q6ZRR7 1453 aa26.46■■□□□ 1.83
SCAMP4-211ENST00000588907 TROQ12816 1431 aaPredicted RBP26.46■■□□□ 1.83
SCAMP4-211ENST00000588907 KIF14Q15058 1648 aa26.39■■□□□ 1.82
SCAMP4-211ENST00000588907 MAGI3Q5TCQ9 1506 aa26.39■■□□□ 1.81
SCAMP4-211ENST00000588907 SUPT6HQ7KZ85 1726 aaKnown RBP26.36■■□□□ 1.81
SCAMP4-211ENST00000588907 KANK4Q5T7N3 995 aaPredicted RBP26.32■■□□□ 1.8
SCAMP4-211ENST00000588907 ABCC10Q5T3U5 1492 aa26.3■■□□□ 1.8
SCAMP4-211ENST00000588907 GLI2P10070 1586 aa26.29■■□□□ 1.8
SCAMP4-211ENST00000588907 DIP2BQ9P265 1576 aa26.28■■□□□ 1.8
SCAMP4-211ENST00000588907 ABCA9Q8IUA7 1624 aa26.27■■□□□ 1.8
SCAMP4-211ENST00000588907 NCOA2Q15596 1464 aa26.26■■□□□ 1.79
SCAMP4-211ENST00000588907 KCNH8Q96L42 1107 aa26.26■■□□□ 1.79
SCAMP4-211ENST00000588907 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.24■■□□□ 1.79
SCAMP4-211ENST00000588907 TTC37Q6PGP7 1564 aa26.2■■□□□ 1.79
SCAMP4-211ENST00000588907 ITSN2Q9NZM3 1697 aa26.2■■□□□ 1.78
SCAMP4-211ENST00000588907 CCNB3Q8WWL7 1395 aa26.2■■□□□ 1.78
SCAMP4-211ENST00000588907 ARAP3Q8WWN8 1544 aa26.19■■□□□ 1.78
SCAMP4-211ENST00000588907 MYO5CQ9NQX4 1742 aa26.18■■□□□ 1.78
SCAMP4-211ENST00000588907 FAM69CQ0P6D2 419 aa26.17■■□□□ 1.78
SCAMP4-211ENST00000588907 MAP3K4Q9Y6R4 1608 aa26.17■■□□□ 1.78
SCAMP4-211ENST00000588907 KIF13AQ9H1H9 1805 aa26.16■■□□□ 1.78
SCAMP4-211ENST00000588907 PREX2Q70Z35 1606 aa26.14■■□□□ 1.78
SCAMP4-211ENST00000588907 MYOM3Q5VTT5 1437 aa26.14■■□□□ 1.77
SCAMP4-211ENST00000588907 CD109Q6YHK3 1445 aa26.14■■□□□ 1.77
SCAMP4-211ENST00000588907 CDC42BPAQ5VT25 1732 aa26.13■■□□□ 1.77
SCAMP4-211ENST00000588907 GPATCH8Q9UKJ3 1502 aaKnown RBP26.13■■□□□ 1.77
SCAMP4-211ENST00000588907 PLCH2O75038 1416 aa26.13■■□□□ 1.77
SCAMP4-211ENST00000588907 PPARGC1BQ86YN6 1023 aaKnown RBP26.11■■□□□ 1.77
SCAMP4-211ENST00000588907 MIA2Q96PC5 1412 aa26.11■■□□□ 1.77
SCAMP4-211ENST00000588907 PHLDB1Q86UU1 1377 aa26.1■■□□□ 1.77
SCAMP4-211ENST00000588907 CFAP74Q9C0B2 1584 aa26.09■■□□□ 1.77
SCAMP4-211ENST00000588907 TEX14Q8IWB6 1497 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms