RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 RIMBP3BA6NNM3 1639 aa18.26■□□□□ 0.51
CDK3-204ENST00000588812 KIF21BO75037 1637 aa18.26■□□□□ 0.51
CDK3-204ENST00000588812 RIMBP3Q9UFD9 1639 aa18.26■□□□□ 0.51
CDK3-204ENST00000588812 KIAA0586Q9BVV6 1533 aa18.25■□□□□ 0.51
CDK3-204ENST00000588812 GOLGA3Q08378 1498 aa18.2■□□□□ 0.5
CDK3-204ENST00000588812 JPH4Q96JJ6 628 aa18.19■□□□□ 0.5
CDK3-204ENST00000588812 IQGAP2Q13576 1575 aa18.16■□□□□ 0.5
CDK3-204ENST00000588812 UBTFP17480 764 aaKnown RBP18.15■□□□□ 0.5
CDK3-204ENST00000588812 SHROOM2Q13796 1616 aa18.15■□□□□ 0.5
CDK3-204ENST00000588812 CTTNBP2Q8WZ74 1663 aa18.15■□□□□ 0.5
CDK3-204ENST00000588812 EHMT2Q96KQ7 1210 aa18.14■□□□□ 0.49
CDK3-204ENST00000588812 ARAP1Q96P48 1450 aa18.12■□□□□ 0.49
CDK3-204ENST00000588812 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
CDK3-204ENST00000588812 UGGT2Q9NYU1 1516 aa18.08■□□□□ 0.48
CDK3-204ENST00000588812 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
CDK3-204ENST00000588812 ERCC6L2Q5T890 1561 aa18.03■□□□□ 0.48
CDK3-204ENST00000588812 CYB5RLQ6IPT4 315 aa18.02■□□□□ 0.48
CDK3-204ENST00000588812 TNIKQ9UKE5 1360 aa18.02■□□□□ 0.47
CDK3-204ENST00000588812 DISP1Q96F81 1524 aa18.01■□□□□ 0.47
CDK3-204ENST00000588812 LOC105371045A0A1W2PR82 267 aa17.99■□□□□ 0.47
CDK3-204ENST00000588812 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
CDK3-204ENST00000588812 KIAA0556O60303 1618 aa17.97■□□□□ 0.47
CDK3-204ENST00000588812 PTPRGP23470 1445 aa17.95■□□□□ 0.46
CDK3-204ENST00000588812 EFCAB5A4FU69 1503 aa17.94■□□□□ 0.46
CDK3-204ENST00000588812 SAMD9Q5K651 1589 aa17.94■□□□□ 0.46
CDK3-204ENST00000588812 P3H3Q8IVL6 736 aa17.92■□□□□ 0.46
CDK3-204ENST00000588812 TTBK1Q5TCY1 1321 aaPredicted RBP17.9■□□□□ 0.46
CDK3-204ENST00000588812 CLIP1P30622 1438 aa17.88■□□□□ 0.45
CDK3-204ENST00000588812 ARHGAP35Q9NRY4 1499 aa17.87■□□□□ 0.45
CDK3-204ENST00000588812 FHOD3Q2V2M9 1422 aa17.85■□□□□ 0.45
CDK3-204ENST00000588812 CEP162Q5TB80 1403 aa17.85■□□□□ 0.45
CDK3-204ENST00000588812 UACAQ9BZF9 1416 aa17.82■□□□□ 0.44
CDK3-204ENST00000588812 FMN1Q68DA7 1419 aa17.8■□□□□ 0.44
CDK3-204ENST00000588812 UHRF1BP1LA0JNW5 1464 aa17.79■□□□□ 0.44
CDK3-204ENST00000588812 PLB1Q6P1J6 1458 aa17.78■□□□□ 0.44
CDK3-204ENST00000588812 NPM1P06748 294 aaKnown RBP eCLIP17.77■□□□□ 0.44
CDK3-204ENST00000588812 ABCA8O94911 1581 aa17.77■□□□□ 0.44
CDK3-204ENST00000588812 ABCC2Q92887 1545 aa17.77■□□□□ 0.43
CDK3-204ENST00000588812 ADCY10Q96PN6 1610 aa17.76■□□□□ 0.43
CDK3-204ENST00000588812 RAPGEF6Q8TEU7 1601 aa17.72■□□□□ 0.43
CDK3-204ENST00000588812 KDM5BQ9UGL1 1544 aa17.69■□□□□ 0.42
CDK3-204ENST00000588812 CASKIN1Q8WXD9 1431 aa17.67■□□□□ 0.42
CDK3-204ENST00000588812 NUP153P49790 1475 aaKnown RBP17.67■□□□□ 0.42
CDK3-204ENST00000588812 ATP1B4Q9UN42 357 aaPredicted RBP17.66■□□□□ 0.42
CDK3-204ENST00000588812 TRHP20396 242 aaPredicted RBP17.65■□□□□ 0.42
CDK3-204ENST00000588812 ATP10BO94823 1461 aa17.64■□□□□ 0.41
CDK3-204ENST00000588812 HECW1Q76N89 1606 aa17.64■□□□□ 0.41
CDK3-204ENST00000588812 FYCO1Q9BQS8 1478 aa17.63■□□□□ 0.41
CDK3-204ENST00000588812 MAPKBP1O60336 1514 aa17.63■□□□□ 0.41
CDK3-204ENST00000588812 ZCCHC11Q5TAX3 1644 aaKnown RBP17.63■□□□□ 0.41
CDK3-204ENST00000588812 ARID3CA6NKF2 412 aa17.63■□□□□ 0.41
CDK3-204ENST00000588812 PCF11O94913 1555 aaKnown RBP17.62■□□□□ 0.41
CDK3-204ENST00000588812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
CDK3-204ENST00000588812 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
CDK3-204ENST00000588812 VPS8Q8N3P4 1428 aa17.62■□□□□ 0.41
CDK3-204ENST00000588812 EPRSP07814 1512 aaKnown RBP17.6■□□□□ 0.41
CDK3-204ENST00000588812 ASXL2Q76L83 1435 aa17.59■□□□□ 0.41
CDK3-204ENST00000588812 CCDC18Q5T9S5 1454 aa17.57■□□□□ 0.4
CDK3-204ENST00000588812 CDK11AQ9UQ88 783 aaPredicted RBP17.56■□□□□ 0.4
CDK3-204ENST00000588812 PLEKHD1A6NEE1 506 aa17.55■□□□□ 0.4
CDK3-204ENST00000588812 CDK13Q14004 1512 aaKnown RBP17.55■□□□□ 0.4
CDK3-204ENST00000588812 WDR7Q9Y4E6 1490 aa17.54■□□□□ 0.4
CDK3-204ENST00000588812 ABCC10Q5T3U5 1492 aa17.52■□□□□ 0.4
CDK3-204ENST00000588812 LRRIQ1Q96JM4 1722 aa17.51■□□□□ 0.39
CDK3-204ENST00000588812 FAM69CQ0P6D2 419 aa17.49■□□□□ 0.39
CDK3-204ENST00000588812 KCNH8Q96L42 1107 aa17.49■□□□□ 0.39
CDK3-204ENST00000588812 APLP2Q06481 763 aa17.47■□□□□ 0.39
CDK3-204ENST00000588812 DIP2BQ9P265 1576 aa17.47■□□□□ 0.39
CDK3-204ENST00000588812 KIF13AQ9H1H9 1805 aa17.47■□□□□ 0.39
CDK3-204ENST00000588812 TROQ12816 1431 aaPredicted RBP17.46■□□□□ 0.39
CDK3-204ENST00000588812 MAP3K1Q13233 1512 aa17.45■□□□□ 0.38
CDK3-204ENST00000588812 GLI2P10070 1586 aa17.45■□□□□ 0.38
CDK3-204ENST00000588812 TIAM1Q13009 1591 aa17.43■□□□□ 0.38
CDK3-204ENST00000588812 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
CDK3-204ENST00000588812 CFAP43Q8NDM7 1665 aa17.42■□□□□ 0.38
CDK3-204ENST00000588812 MAGI3Q5TCQ9 1506 aa17.4■□□□□ 0.38
CDK3-204ENST00000588812 KIF14Q15058 1648 aa17.38■□□□□ 0.37
CDK3-204ENST00000588812 EHBP1L1Q8N3D4 1523 aa17.37■□□□□ 0.37
CDK3-204ENST00000588812 ABCA9Q8IUA7 1624 aa17.37■□□□□ 0.37
CDK3-204ENST00000588812 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
CDK3-204ENST00000588812 LRRC9Q6ZRR7 1453 aa17.37■□□□□ 0.37
CDK3-204ENST00000588812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.36■□□□□ 0.37
CDK3-204ENST00000588812 MAP3K4Q9Y6R4 1608 aa17.36■□□□□ 0.37
CDK3-204ENST00000588812 KANK4Q5T7N3 995 aaPredicted RBP17.34■□□□□ 0.37
CDK3-204ENST00000588812 TTC37Q6PGP7 1564 aa17.32■□□□□ 0.36
CDK3-204ENST00000588812 TEX14Q8IWB6 1497 aa17.31■□□□□ 0.36
CDK3-204ENST00000588812 SUPT6HQ7KZ85 1726 aaKnown RBP17.29■□□□□ 0.36
CDK3-204ENST00000588812 PLCH2O75038 1416 aa17.29■□□□□ 0.36
CDK3-204ENST00000588812 TSPOAP1O95153 1857 aa17.29■□□□□ 0.36
CDK3-204ENST00000588812 NCOA2Q15596 1464 aa17.28■□□□□ 0.36
CDK3-204ENST00000588812 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
CDK3-204ENST00000588812 ARAP3Q8WWN8 1544 aa17.26■□□□□ 0.35
CDK3-204ENST00000588812 PPRC1Q5VV67 1664 aaKnown RBP17.26■□□□□ 0.35
CDK3-204ENST00000588812 MYO5CQ9NQX4 1742 aa17.26■□□□□ 0.35
CDK3-204ENST00000588812 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
CDK3-204ENST00000588812 PHLDB1Q86UU1 1377 aa17.25■□□□□ 0.35
CDK3-204ENST00000588812 GPATCH8Q9UKJ3 1502 aaKnown RBP17.24■□□□□ 0.35
CDK3-204ENST00000588812 FANCAO15360 1455 aa17.24■□□□□ 0.35
CDK3-204ENST00000588812 NEO1Q92859 1461 aa17.24■□□□□ 0.35
CDK3-204ENST00000588812 ARHGAP5Q13017 1502 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 944.6 ms