RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
APOC1-203ENST00000588802 TTBK1Q5TCY1 1321 aaPredicted RBP17.3■□□□□ 0.36
APOC1-203ENST00000588802 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
APOC1-203ENST00000588802 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
APOC1-203ENST00000588802 CARMIL1Q5VZK9 1371 aa17.26■□□□□ 0.35
APOC1-203ENST00000588802 CUL7Q14999 1698 aa17.24■□□□□ 0.35
APOC1-203ENST00000588802 NPM1P06748 294 aaKnown RBP eCLIP17.24■□□□□ 0.35
APOC1-203ENST00000588802 FAM69CQ0P6D2 419 aa17.17■□□□□ 0.34
APOC1-203ENST00000588802 PTPRGP23470 1445 aa17.13■□□□□ 0.33
APOC1-203ENST00000588802 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
APOC1-203ENST00000588802 MAPKBP1O60336 1514 aa17.12■□□□□ 0.33
APOC1-203ENST00000588802 ADCY10Q96PN6 1610 aa17.12■□□□□ 0.33
APOC1-203ENST00000588802 CARMIL2Q6F5E8 1435 aa17.11■□□□□ 0.33
APOC1-203ENST00000588802 ABCC10Q5T3U5 1492 aa17.1■□□□□ 0.33
APOC1-203ENST00000588802 KIF13AQ9H1H9 1805 aa17.1■□□□□ 0.33
APOC1-203ENST00000588802 IQGAP2Q13576 1575 aa17.08■□□□□ 0.32
APOC1-203ENST00000588802 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.32
APOC1-203ENST00000588802 TNIKQ9UKE5 1360 aa17.08■□□□□ 0.32
APOC1-203ENST00000588802 DIP2BQ9P265 1576 aa17.02■□□□□ 0.31
APOC1-203ENST00000588802 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
APOC1-203ENST00000588802 UHRF1BP1LA0JNW5 1464 aa16.99■□□□□ 0.31
APOC1-203ENST00000588802 ABCC2Q92887 1545 aa16.98■□□□□ 0.31
APOC1-203ENST00000588802 UACAQ9BZF9 1416 aa16.97■□□□□ 0.31
APOC1-203ENST00000588802 UGGT2Q9NYU1 1516 aa16.97■□□□□ 0.31
APOC1-203ENST00000588802 TSPOAP1O95153 1857 aa16.97■□□□□ 0.31
APOC1-203ENST00000588802 ASXL2Q76L83 1435 aa16.96■□□□□ 0.3
APOC1-203ENST00000588802 PLB1Q6P1J6 1458 aa16.95■□□□□ 0.3
APOC1-203ENST00000588802 KIAA0556O60303 1618 aa16.92■□□□□ 0.3
APOC1-203ENST00000588802 P3H3Q8IVL6 736 aa16.91■□□□□ 0.3
APOC1-203ENST00000588802 KDM6BO15054 1643 aa16.89■□□□□ 0.29
APOC1-203ENST00000588802 KDM5BQ9UGL1 1544 aa16.89■□□□□ 0.29
APOC1-203ENST00000588802 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
APOC1-203ENST00000588802 PRXQ9BXM0 1461 aa16.88■□□□□ 0.29
APOC1-203ENST00000588802 FAM9AQ8IZU1 332 aaPredicted RBP16.88■□□□□ 0.29
APOC1-203ENST00000588802 GLI2P10070 1586 aa16.88■□□□□ 0.29
APOC1-203ENST00000588802 ARID3CA6NKF2 412 aa16.87■□□□□ 0.29
APOC1-203ENST00000588802 CTTNBP2Q8WZ74 1663 aa16.87■□□□□ 0.29
APOC1-203ENST00000588802 RANGAP1P46060 587 aaPredicted RBP16.86■□□□□ 0.29
APOC1-203ENST00000588802 CSRNP3Q8WYN3 585 aa16.86■□□□□ 0.29
APOC1-203ENST00000588802 KCNH8Q96L42 1107 aa16.84■□□□□ 0.29
APOC1-203ENST00000588802 ZCCHC11Q5TAX3 1644 aaKnown RBP16.84■□□□□ 0.29
APOC1-203ENST00000588802 EPRSP07814 1512 aaKnown RBP16.83■□□□□ 0.28
APOC1-203ENST00000588802 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
APOC1-203ENST00000588802 TEX14Q8IWB6 1497 aa16.78■□□□□ 0.28
APOC1-203ENST00000588802 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
APOC1-203ENST00000588802 KDM4FA0A1W2PPD8 638 aa16.77■□□□□ 0.28
APOC1-203ENST00000588802 EEA1Q15075 1411 aa16.77■□□□□ 0.27
APOC1-203ENST00000588802 WDR7Q9Y4E6 1490 aa16.76■□□□□ 0.27
APOC1-203ENST00000588802 ABCA8O94911 1581 aa16.76■□□□□ 0.27
APOC1-203ENST00000588802 COL17A1Q9UMD9 1497 aaPredicted RBP16.74■□□□□ 0.27
APOC1-203ENST00000588802 MAP3K4Q9Y6R4 1608 aa16.73■□□□□ 0.27
APOC1-203ENST00000588802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
APOC1-203ENST00000588802 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
APOC1-203ENST00000588802 CD109Q6YHK3 1445 aa16.7■□□□□ 0.26
APOC1-203ENST00000588802 ATP10BO94823 1461 aa16.67■□□□□ 0.26
APOC1-203ENST00000588802 MAGI3Q5TCQ9 1506 aa16.67■□□□□ 0.26
APOC1-203ENST00000588802 LOC105371045A0A1W2PR82 267 aa16.67■□□□□ 0.26
APOC1-203ENST00000588802 FHOD3Q2V2M9 1422 aa16.65■□□□□ 0.26
APOC1-203ENST00000588802 SAMD9Q5K651 1589 aa16.64■□□□□ 0.25
APOC1-203ENST00000588802 PHLDB1Q86UU1 1377 aa16.62■□□□□ 0.25
APOC1-203ENST00000588802 ADGRL1O94910 1474 aa16.61■□□□□ 0.25
APOC1-203ENST00000588802 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
APOC1-203ENST00000588802 CFAP43Q8NDM7 1665 aa16.61■□□□□ 0.25
APOC1-203ENST00000588802 RAPGEF6Q8TEU7 1601 aa16.6■□□□□ 0.25
APOC1-203ENST00000588802 ATP1B4Q9UN42 357 aaPredicted RBP16.57■□□□□ 0.24
APOC1-203ENST00000588802 NUP153P49790 1475 aaKnown RBP16.56■□□□□ 0.24
APOC1-203ENST00000588802 KIF21BO75037 1637 aa16.56■□□□□ 0.24
APOC1-203ENST00000588802 PLEKHD1A6NEE1 506 aa16.54■□□□□ 0.24
APOC1-203ENST00000588802 ARAP3Q8WWN8 1544 aa16.54■□□□□ 0.24
APOC1-203ENST00000588802 RAPGEF3O95398 923 aa16.53■□□□□ 0.24
APOC1-203ENST00000588802 EFCAB5A4FU69 1503 aa16.51■□□□□ 0.23
APOC1-203ENST00000588802 ABCA9Q8IUA7 1624 aa16.5■□□□□ 0.23
APOC1-203ENST00000588802 NEO1Q92859 1461 aa16.49■□□□□ 0.23
APOC1-203ENST00000588802 CDK13Q14004 1512 aaKnown RBP16.45■□□□□ 0.22
APOC1-203ENST00000588802 ARID4BQ4LE39 1312 aaPredicted RBP16.43■□□□□ 0.22
APOC1-203ENST00000588802 ARHGAP35Q9NRY4 1499 aa16.42■□□□□ 0.22
APOC1-203ENST00000588802 FMN1Q68DA7 1419 aa16.4■□□□□ 0.22
APOC1-203ENST00000588802 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.4■□□□□ 0.22
APOC1-203ENST00000588802 AKNAQ7Z591 1439 aa16.39■□□□□ 0.21
APOC1-203ENST00000588802 FANCAO15360 1455 aa16.38■□□□□ 0.21
APOC1-203ENST00000588802 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
APOC1-203ENST00000588802 TTC37Q6PGP7 1564 aa16.37■□□□□ 0.21
APOC1-203ENST00000588802 DENND4BO75064 1496 aaPredicted RBP16.36■□□□□ 0.21
APOC1-203ENST00000588802 FRMPD1Q5SYB0 1578 aa16.35■□□□□ 0.21
APOC1-203ENST00000588802 HECW2Q9P2P5 1572 aa16.35■□□□□ 0.21
APOC1-203ENST00000588802 PLPPR3Q6T4P5 718 aa16.35■□□□□ 0.21
APOC1-203ENST00000588802 CEP162Q5TB80 1403 aa16.34■□□□□ 0.21
APOC1-203ENST00000588802 HECW1Q76N89 1606 aa16.34■□□□□ 0.21
APOC1-203ENST00000588802 CFAP74Q9C0B2 1584 aa16.33■□□□□ 0.2
APOC1-203ENST00000588802 PLCH2O75038 1416 aa16.3■□□□□ 0.2
APOC1-203ENST00000588802 SCAPERQ9BY12 1400 aa16.3■□□□□ 0.2
APOC1-203ENST00000588802 MLECQ14165 292 aa16.3■□□□□ 0.2
APOC1-203ENST00000588802 MAGI2Q86UL8 1455 aa16.29■□□□□ 0.2
APOC1-203ENST00000588802 EFCAB2Q5VUJ9 269 aa16.29■□□□□ 0.2
APOC1-203ENST00000588802 YEATS2Q9ULM3 1422 aa16.28■□□□□ 0.2
APOC1-203ENST00000588802 PTPRMP28827 1452 aa16.28■□□□□ 0.2
APOC1-203ENST00000588802 RICTORQ6R327 1708 aa16.28■□□□□ 0.2
APOC1-203ENST00000588802 KIF14Q15058 1648 aa16.27■□□□□ 0.2
APOC1-203ENST00000588802 MYT1LQ9UL68 1186 aa16.27■□□□□ 0.2
APOC1-203ENST00000588802 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 1474.5 ms