RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 CEP170Q5SW79 1584 aa36.58■■■■□ 3.45
ACTN4-210ENST00000588618 NUP160Q12769 1436 aa36.53■■■■□ 3.44
ACTN4-210ENST00000588618 CEP162Q5TB80 1403 aa36.42■■■■□ 3.42
ACTN4-210ENST00000588618 KIAA0586Q9BVV6 1533 aa36.4■■■■□ 3.42
ACTN4-210ENST00000588618 IQGAP2Q13576 1575 aa36.4■■■■□ 3.42
ACTN4-210ENST00000588618 RANGAP1P46060 587 aaPredicted RBP36.34■■■■□ 3.41
ACTN4-210ENST00000588618 OSCARQ8IYS5 282 aa36.29■■■■□ 3.4
ACTN4-210ENST00000588618 CLIP1P30622 1438 aa36.29■■■■□ 3.4
ACTN4-210ENST00000588618 CLASP1Q7Z460 1538 aa36.29■■■■□ 3.4
ACTN4-210ENST00000588618 ARHGAP35Q9NRY4 1499 aa36.23■■■■□ 3.39
ACTN4-210ENST00000588618 UGGT2Q9NYU1 1516 aa36.22■■■■□ 3.39
ACTN4-210ENST00000588618 SAMD9Q5K651 1589 aa36.19■■■■□ 3.38
ACTN4-210ENST00000588618 SHROOM2Q13796 1616 aa36.16■■■■□ 3.38
ACTN4-210ENST00000588618 EFCAB5A4FU69 1503 aa36.14■■■■□ 3.38
ACTN4-210ENST00000588618 JPH4Q96JJ6 628 aa36.14■■■■□ 3.38
ACTN4-210ENST00000588618 DISP1Q96F81 1524 aa36.11■■■■□ 3.37
ACTN4-210ENST00000588618 ARAP1Q96P48 1450 aa36.1■■■■□ 3.37
ACTN4-210ENST00000588618 KIAA0556O60303 1618 aa36.07■■■■□ 3.36
ACTN4-210ENST00000588618 P3H3Q8IVL6 736 aa36.05■■■■□ 3.36
ACTN4-210ENST00000588618 FHOD3Q2V2M9 1422 aa36.04■■■■□ 3.36
ACTN4-210ENST00000588618 CARMIL2Q6F5E8 1435 aa36■■■■□ 3.35
ACTN4-210ENST00000588618 PRG4Q92954 1404 aaPredicted RBP36■■■■□ 3.35
ACTN4-210ENST00000588618 ERCC6L2Q5T890 1561 aa36■■■■□ 3.35
ACTN4-210ENST00000588618 VPS8Q8N3P4 1428 aa35.88■■■■□ 3.33
ACTN4-210ENST00000588618 TTBK1Q5TCY1 1321 aaPredicted RBP35.8■■■■□ 3.32
ACTN4-210ENST00000588618 FMN1Q68DA7 1419 aa35.76■■■■□ 3.32
ACTN4-210ENST00000588618 PCF11O94913 1555 aaKnown RBP35.76■■■■□ 3.31
ACTN4-210ENST00000588618 PTPRGP23470 1445 aa35.69■■■■□ 3.3
ACTN4-210ENST00000588618 ARHGEF11O15085 1522 aa35.67■■■■□ 3.3
ACTN4-210ENST00000588618 CASKIN1Q8WXD9 1431 aa35.65■■■■□ 3.3
ACTN4-210ENST00000588618 PLB1Q6P1J6 1458 aa35.63■■■■□ 3.29
ACTN4-210ENST00000588618 FYCO1Q9BQS8 1478 aa35.63■■■■□ 3.29
ACTN4-210ENST00000588618 LRRIQ1Q96JM4 1722 aa35.61■■■■□ 3.29
ACTN4-210ENST00000588618 RAPGEF6Q8TEU7 1601 aa35.61■■■■□ 3.29
ACTN4-210ENST00000588618 ABCA8O94911 1581 aa35.6■■■■□ 3.29
ACTN4-210ENST00000588618 RIMBP3CA6NJZ7 1639 aa35.58■■■■□ 3.29
ACTN4-210ENST00000588618 RIMBP3BA6NNM3 1639 aa35.58■■■■□ 3.29
ACTN4-210ENST00000588618 RIMBP3Q9UFD9 1639 aa35.58■■■■□ 3.29
ACTN4-210ENST00000588618 ATP1B4Q9UN42 357 aaPredicted RBP35.58■■■■□ 3.29
ACTN4-210ENST00000588618 HECW1Q76N89 1606 aa35.53■■■■□ 3.28
ACTN4-210ENST00000588618 NUP153P49790 1475 aaKnown RBP35.51■■■■□ 3.28
ACTN4-210ENST00000588618 APLP2Q06481 763 aa35.49■■■■□ 3.27
ACTN4-210ENST00000588618 UACAQ9BZF9 1416 aa35.47■■■■□ 3.27
ACTN4-210ENST00000588618 CFAP43Q8NDM7 1665 aa35.45■■■■□ 3.26
ACTN4-210ENST00000588618 TIAM1Q13009 1591 aa35.43■■■■□ 3.26
ACTN4-210ENST00000588618 ABCC2Q92887 1545 aa35.43■■■■□ 3.26
ACTN4-210ENST00000588618 EPRSP07814 1512 aaKnown RBP35.42■■■■□ 3.26
ACTN4-210ENST00000588618 CDK13Q14004 1512 aaKnown RBP35.41■■■■□ 3.26
ACTN4-210ENST00000588618 ARID3CA6NKF2 412 aa35.39■■■■□ 3.26
ACTN4-210ENST00000588618 ADCY10Q96PN6 1610 aa35.39■■■■□ 3.26
ACTN4-210ENST00000588618 MAP3K1Q13233 1512 aa35.38■■■■□ 3.25
ACTN4-210ENST00000588618 UHRF1BP1LA0JNW5 1464 aa35.36■■■■□ 3.25
ACTN4-210ENST00000588618 CCDC18Q5T9S5 1454 aa35.35■■■■□ 3.25
ACTN4-210ENST00000588618 CYB5RLQ6IPT4 315 aa35.35■■■■□ 3.25
ACTN4-210ENST00000588618 PPARGC1BQ86YN6 1023 aaKnown RBP35.35■■■■□ 3.25
ACTN4-210ENST00000588618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.31■■■■□ 3.24
ACTN4-210ENST00000588618 HNRNPUL2Q1KMD3 747 aaKnown RBP35.31■■■■□ 3.24
ACTN4-210ENST00000588618 ATP10BO94823 1461 aa35.31■■■■□ 3.24
ACTN4-210ENST00000588618 KANK4Q5T7N3 995 aaPredicted RBP35.3■■■■□ 3.24
ACTN4-210ENST00000588618 DNAJC5Q9H3Z4 198 aa35.29■■■■□ 3.24
ACTN4-210ENST00000588618 MAGI3Q5TCQ9 1506 aa35.27■■■■□ 3.24
ACTN4-210ENST00000588618 LRRC9Q6ZRR7 1453 aa35.24■■■■□ 3.23
ACTN4-210ENST00000588618 ZCCHC11Q5TAX3 1644 aaKnown RBP35.24■■■■□ 3.23
ACTN4-210ENST00000588618 KDM5BQ9UGL1 1544 aa35.24■■■■□ 3.23
ACTN4-210ENST00000588618 NPM1P06748 294 aaKnown RBP eCLIP35.18■■■■□ 3.22
ACTN4-210ENST00000588618 CDK11AQ9UQ88 783 aaPredicted RBP35.18■■■■□ 3.22
ACTN4-210ENST00000588618 EHBP1L1Q8N3D4 1523 aa35.12■■■■□ 3.21
ACTN4-210ENST00000588618 MTUS2Q5JR59 1369 aa35.11■■■■□ 3.21
ACTN4-210ENST00000588618 PLEKHD1A6NEE1 506 aa35.08■■■■□ 3.21
ACTN4-210ENST00000588618 TROQ12816 1431 aaPredicted RBP35.04■■■■□ 3.2
ACTN4-210ENST00000588618 SUPT6HQ7KZ85 1726 aaKnown RBP35■■■■□ 3.19
ACTN4-210ENST00000588618 KIF14Q15058 1648 aa35■■■■□ 3.19
ACTN4-210ENST00000588618 NCOA2Q15596 1464 aa34.95■■■■□ 3.19
ACTN4-210ENST00000588618 ASXL2Q76L83 1435 aa34.92■■■■□ 3.18
ACTN4-210ENST00000588618 WDR7Q9Y4E6 1490 aa34.9■■■■□ 3.18
ACTN4-210ENST00000588618 PHLDB1Q86UU1 1377 aa34.89■■■■□ 3.18
ACTN4-210ENST00000588618 MAPKBP1O60336 1514 aa34.87■■■■□ 3.17
ACTN4-210ENST00000588618 KCNH8Q96L42 1107 aa34.85■■■■□ 3.17
ACTN4-210ENST00000588618 ABCC10Q5T3U5 1492 aa34.84■■■■□ 3.17
ACTN4-210ENST00000588618 TTC37Q6PGP7 1564 aa34.8■■■■□ 3.16
ACTN4-210ENST00000588618 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.8■■■■□ 3.161e-6■■□□□ 13.8
ACTN4-210ENST00000588618 CDC42BPAQ5VT25 1732 aa34.76■■■■□ 3.15
ACTN4-210ENST00000588618 MYOM3Q5VTT5 1437 aa34.73■■■■□ 3.15
ACTN4-210ENST00000588618 CCNB3Q8WWL7 1395 aa34.71■■■■□ 3.15
ACTN4-210ENST00000588618 GPATCH8Q9UKJ3 1502 aaKnown RBP34.7■■■■□ 3.15
ACTN4-210ENST00000588618 RRBP1Q9P2E9 1410 aaKnown RBP34.69■■■■□ 3.14
ACTN4-210ENST00000588618 ABCA9Q8IUA7 1624 aa34.69■■■■□ 3.14
ACTN4-210ENST00000588618 ITSN2Q9NZM3 1697 aa34.68■■■■□ 3.14
ACTN4-210ENST00000588618 FGD6Q6ZV73 1430 aa34.67■■■■□ 3.14
ACTN4-210ENST00000588618 MYO5CQ9NQX4 1742 aa34.65■■■■□ 3.14
ACTN4-210ENST00000588618 CDC42BPBQ9Y5S2 1711 aa34.65■■■■□ 3.14
ACTN4-210ENST00000588618 PREX2Q70Z35 1606 aa34.65■■■■□ 3.14
ACTN4-210ENST00000588618 TRIM26Q12899 539 aaPredicted RBP34.64■■■■□ 3.14
ACTN4-210ENST00000588618 DIP2BQ9P265 1576 aa34.61■■■■□ 3.13
ACTN4-210ENST00000588618 PTPN23Q9H3S7 1636 aa34.59■■■■□ 3.13
ACTN4-210ENST00000588618 MIA2Q96PC5 1412 aa34.57■■■■□ 3.13
ACTN4-210ENST00000588618 GLI2P10070 1586 aa34.55■■■■□ 3.12
ACTN4-210ENST00000588618 FAM69CQ0P6D2 419 aa34.55■■■■□ 3.12
ACTN4-210ENST00000588618 CFDP1Q9UEE9 299 aaPredicted RBP34.55■■■■□ 3.12
ACTN4-210ENST00000588618 KIF13AQ9H1H9 1805 aa34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms