RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 ADCY10Q96PN6 1610 aa24.71■■□□□ 1.55
CLPTM1-208ENST00000588274 MAPKBP1O60336 1514 aa24.7■■□□□ 1.54
CLPTM1-208ENST00000588274 ABCC10Q5T3U5 1492 aa24.66■■□□□ 1.54
CLPTM1-208ENST00000588274 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
CLPTM1-208ENST00000588274 DIP2BQ9P265 1576 aa24.65■■□□□ 1.54
CLPTM1-208ENST00000588274 KIAA0586Q9BVV6 1533 aa24.65■■□□□ 1.54
CLPTM1-208ENST00000588274 IGF1RP08069 1367 aa24.65■■□□□ 1.54
CLPTM1-208ENST00000588274 CUL7Q14999 1698 aa24.64■■□□□ 1.53
CLPTM1-208ENST00000588274 KIF27Q86VH2 1401 aa24.57■■□□□ 1.52
CLPTM1-208ENST00000588274 FAM69CQ0P6D2 419 aa24.5■■□□□ 1.51
CLPTM1-208ENST00000588274 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
CLPTM1-208ENST00000588274 KDM6BO15054 1643 aa24.41■■□□□ 1.5
CLPTM1-208ENST00000588274 NPM1P06748 294 aaKnown RBP eCLIP24.4■■□□□ 1.5
CLPTM1-208ENST00000588274 IQGAP2Q13576 1575 aa24.39■■□□□ 1.5
CLPTM1-208ENST00000588274 PTPRGP23470 1445 aa24.38■■□□□ 1.49
CLPTM1-208ENST00000588274 ABCC2Q92887 1545 aa24.38■■□□□ 1.49
CLPTM1-208ENST00000588274 DISP1Q96F81 1524 aa24.35■■□□□ 1.49
CLPTM1-208ENST00000588274 PPRC1Q5VV67 1664 aaKnown RBP24.35■■□□□ 1.49
CLPTM1-208ENST00000588274 TNIKQ9UKE5 1360 aa24.35■■□□□ 1.49
CLPTM1-208ENST00000588274 TSPOAP1O95153 1857 aa24.34■■□□□ 1.49
CLPTM1-208ENST00000588274 UHRF1BP1LA0JNW5 1464 aa24.33■■□□□ 1.49
CLPTM1-208ENST00000588274 GLI2P10070 1586 aa24.31■■□□□ 1.48
CLPTM1-208ENST00000588274 CARMIL2Q6F5E8 1435 aa24.3■■□□□ 1.48
CLPTM1-208ENST00000588274 ASXL2Q76L83 1435 aa24.29■■□□□ 1.48
CLPTM1-208ENST00000588274 UGGT2Q9NYU1 1516 aa24.27■■□□□ 1.48
CLPTM1-208ENST00000588274 KDM4FA0A1W2PPD8 638 aa24.26■■□□□ 1.47
CLPTM1-208ENST00000588274 PLB1Q6P1J6 1458 aa24.25■■□□□ 1.47
CLPTM1-208ENST00000588274 UACAQ9BZF9 1416 aa24.24■■□□□ 1.47
CLPTM1-208ENST00000588274 KDM5BQ9UGL1 1544 aa24.23■■□□□ 1.47
CLPTM1-208ENST00000588274 KIAA0556O60303 1618 aa24.22■■□□□ 1.47
CLPTM1-208ENST00000588274 RAPGEF2Q9Y4G8 1499 aa24.21■■□□□ 1.47
CLPTM1-208ENST00000588274 MAP3K4Q9Y6R4 1608 aa24.19■■□□□ 1.46
CLPTM1-208ENST00000588274 TTBK1Q5TCY1 1321 aaPredicted RBP24.18■■□□□ 1.46
CLPTM1-208ENST00000588274 EPRSP07814 1512 aaKnown RBP24.18■■□□□ 1.46
CLPTM1-208ENST00000588274 ZCCHC11Q5TAX3 1644 aaKnown RBP24.17■■□□□ 1.46
CLPTM1-208ENST00000588274 COL17A1Q9UMD9 1497 aaPredicted RBP24.16■■□□□ 1.46
CLPTM1-208ENST00000588274 CTTNBP2Q8WZ74 1663 aa24.08■■□□□ 1.44
CLPTM1-208ENST00000588274 ADGRL1O94910 1474 aa24.04■■□□□ 1.44
CLPTM1-208ENST00000588274 WDR7Q9Y4E6 1490 aa24.04■■□□□ 1.44
CLPTM1-208ENST00000588274 ABCA8O94911 1581 aa24.02■■□□□ 1.44
CLPTM1-208ENST00000588274 TEX14Q8IWB6 1497 aa24■■□□□ 1.43
CLPTM1-208ENST00000588274 PRXQ9BXM0 1461 aa24■■□□□ 1.43
CLPTM1-208ENST00000588274 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
CLPTM1-208ENST00000588274 MAGI3Q5TCQ9 1506 aa23.92■■□□□ 1.42
CLPTM1-208ENST00000588274 CFAP43Q8NDM7 1665 aa23.92■■□□□ 1.42
CLPTM1-208ENST00000588274 CD109Q6YHK3 1445 aa23.84■■□□□ 1.41
CLPTM1-208ENST00000588274 HECW2Q9P2P5 1572 aa23.81■■□□□ 1.4
CLPTM1-208ENST00000588274 SAMD9Q5K651 1589 aa23.78■■□□□ 1.4
CLPTM1-208ENST00000588274 ATP10BO94823 1461 aa23.75■■□□□ 1.39
CLPTM1-208ENST00000588274 ARAP3Q8WWN8 1544 aa23.74■■□□□ 1.39
CLPTM1-208ENST00000588274 KIF21BO75037 1637 aa23.73■■□□□ 1.39
CLPTM1-208ENST00000588274 ABCA9Q8IUA7 1624 aa23.73■■□□□ 1.39
CLPTM1-208ENST00000588274 KCNH8Q96L42 1107 aa23.71■■□□□ 1.39
CLPTM1-208ENST00000588274 ILDR1Q86SU0 546 aaPredicted RBP23.68■■□□□ 1.38
CLPTM1-208ENST00000588274 RAPGEF6Q8TEU7 1601 aa23.66■■□□□ 1.38
CLPTM1-208ENST00000588274 FRMPD1Q5SYB0 1578 aa23.64■■□□□ 1.37
CLPTM1-208ENST00000588274 NUP153P49790 1475 aaKnown RBP23.62■■□□□ 1.37
CLPTM1-208ENST00000588274 ARID3CA6NKF2 412 aa23.62■■□□□ 1.37
CLPTM1-208ENST00000588274 P3H3Q8IVL6 736 aa23.62■■□□□ 1.37
CLPTM1-208ENST00000588274 ADAMTSL3P82987 1691 aa23.58■■□□□ 1.37
CLPTM1-208ENST00000588274 NEO1Q92859 1461 aa23.57■■□□□ 1.36
CLPTM1-208ENST00000588274 CSRNP3Q8WYN3 585 aa23.57■■□□□ 1.36
CLPTM1-208ENST00000588274 PHLDB1Q86UU1 1377 aa23.56■■□□□ 1.36
CLPTM1-208ENST00000588274 FHOD3Q2V2M9 1422 aa23.52■■□□□ 1.36
CLPTM1-208ENST00000588274 EEA1Q15075 1411 aa23.5■■□□□ 1.35
CLPTM1-208ENST00000588274 PTPRMP28827 1452 aa23.49■■□□□ 1.35
CLPTM1-208ENST00000588274 RAPGEF3O95398 923 aa23.49■■□□□ 1.35
CLPTM1-208ENST00000588274 BCORL1Q5H9F3 1711 aa23.48■■□□□ 1.35
CLPTM1-208ENST00000588274 ARHGEF40Q8TER5 1519 aa23.48■■□□□ 1.35
CLPTM1-208ENST00000588274 RICTORQ6R327 1708 aa23.47■■□□□ 1.35
CLPTM1-208ENST00000588274 MADDQ8WXG6 1647 aa23.44■■□□□ 1.34
CLPTM1-208ENST00000588274 TTC37Q6PGP7 1564 aa23.44■■□□□ 1.34
CLPTM1-208ENST00000588274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.34
CLPTM1-208ENST00000588274 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
CLPTM1-208ENST00000588274 SIGLEC1Q9BZZ2 1709 aa23.4■■□□□ 1.34
CLPTM1-208ENST00000588274 ZMYM4Q5VZL5 1548 aa23.39■■□□□ 1.34
CLPTM1-208ENST00000588274 FAM9AQ8IZU1 332 aaPredicted RBP23.38■■□□□ 1.33
CLPTM1-208ENST00000588274 FANCAO15360 1455 aa23.36■■□□□ 1.33
CLPTM1-208ENST00000588274 DENND4BO75064 1496 aaPredicted RBP23.36■■□□□ 1.33
CLPTM1-208ENST00000588274 CFAP74Q9C0B2 1584 aa23.36■■□□□ 1.33
CLPTM1-208ENST00000588274 LMTK3Q96Q04 1460 aa23.36■■□□□ 1.33
CLPTM1-208ENST00000588274 PCF11O94913 1555 aaKnown RBP23.35■■□□□ 1.33
CLPTM1-208ENST00000588274 AKNAQ7Z591 1439 aa23.35■■□□□ 1.33
CLPTM1-208ENST00000588274 CDK13Q14004 1512 aaKnown RBP23.35■■□□□ 1.33
CLPTM1-208ENST00000588274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.33
CLPTM1-208ENST00000588274 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.33
CLPTM1-208ENST00000588274 RANGAP1P46060 587 aaPredicted RBP23.31■■□□□ 1.32
CLPTM1-208ENST00000588274 RIMS1Q86UR5 1692 aaKnown RBP23.31■■□□□ 1.32
CLPTM1-208ENST00000588274 YEATS2Q9ULM3 1422 aa23.3■■□□□ 1.32
CLPTM1-208ENST00000588274 PLEKHD1A6NEE1 506 aa23.28■■□□□ 1.32
CLPTM1-208ENST00000588274 ZFYVE16Q7Z3T8 1539 aa23.28■■□□□ 1.32
CLPTM1-208ENST00000588274 HECW1Q76N89 1606 aa23.26■■□□□ 1.31
CLPTM1-208ENST00000588274 POGZQ7Z3K3 1410 aa23.25■■□□□ 1.31
CLPTM1-208ENST00000588274 MAGI2Q86UL8 1455 aa23.24■■□□□ 1.31
CLPTM1-208ENST00000588274 PLCH2O75038 1416 aa23.23■■□□□ 1.31
CLPTM1-208ENST00000588274 ARHGAP35Q9NRY4 1499 aa23.22■■□□□ 1.31
CLPTM1-208ENST00000588274 ARID4BQ4LE39 1312 aaPredicted RBP23.21■■□□□ 1.31
CLPTM1-208ENST00000588274 KIF14Q15058 1648 aa23.19■■□□□ 1.3
CLPTM1-208ENST00000588274 FBXO41Q8TF61 875 aa23.18■■□□□ 1.3
CLPTM1-208ENST00000588274 SCAPERQ9BY12 1400 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms