RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 LOC105371045A0A1W2PR82 267 aa23.42■■□□□ 1.34
CCDC43-203ENST00000588210 ARHGEF11O15085 1522 aa23.41■■□□□ 1.34
CCDC43-203ENST00000588210 KIAA0586Q9BVV6 1533 aa23.4■■□□□ 1.34
CCDC43-203ENST00000588210 RIMBP3CA6NJZ7 1639 aa23.38■■□□□ 1.33
CCDC43-203ENST00000588210 RIMBP3BA6NNM3 1639 aa23.38■■□□□ 1.33
CCDC43-203ENST00000588210 RIMBP3Q9UFD9 1639 aa23.38■■□□□ 1.33
CCDC43-203ENST00000588210 SHROOM2Q13796 1616 aa23.35■■□□□ 1.33
CCDC43-203ENST00000588210 JPH4Q96JJ6 628 aa23.34■■□□□ 1.33
CCDC43-203ENST00000588210 KIF21BO75037 1637 aa23.28■■□□□ 1.32
CCDC43-203ENST00000588210 IQGAP2Q13576 1575 aa23.27■■□□□ 1.32
CCDC43-203ENST00000588210 PRG4Q92954 1404 aaPredicted RBP23.26■■□□□ 1.31
CCDC43-203ENST00000588210 CTTNBP2Q8WZ74 1663 aa23.24■■□□□ 1.31
CCDC43-203ENST00000588210 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
CCDC43-203ENST00000588210 ERCC6L2Q5T890 1561 aa23.22■■□□□ 1.31
CCDC43-203ENST00000588210 CYB5RLQ6IPT4 315 aa23.2■■□□□ 1.3
CCDC43-203ENST00000588210 UGGT2Q9NYU1 1516 aa23.16■■□□□ 1.3
CCDC43-203ENST00000588210 GOLGA3Q08378 1498 aa23.16■■□□□ 1.3
CCDC43-203ENST00000588210 CARMIL2Q6F5E8 1435 aa23.15■■□□□ 1.3
CCDC43-203ENST00000588210 TRIM26Q12899 539 aaPredicted RBP23.13■■□□□ 1.29
CCDC43-203ENST00000588210 DISP1Q96F81 1524 aa23.1■■□□□ 1.29
CCDC43-203ENST00000588210 UBTFP17480 764 aaKnown RBP23.09■■□□□ 1.29
CCDC43-203ENST00000588210 EHMT2Q96KQ7 1210 aa23.09■■□□□ 1.29
CCDC43-203ENST00000588210 TNIKQ9UKE5 1360 aa23.05■■□□□ 1.28
CCDC43-203ENST00000588210 KIAA0556O60303 1618 aa23.05■■□□□ 1.28
CCDC43-203ENST00000588210 PTPRGP23470 1445 aa23.02■■□□□ 1.28
CCDC43-203ENST00000588210 SAMD9Q5K651 1589 aa22.96■■□□□ 1.27
CCDC43-203ENST00000588210 PPARGC1BQ86YN6 1023 aaKnown RBP22.96■■□□□ 1.27
CCDC43-203ENST00000588210 TTBK1Q5TCY1 1321 aaPredicted RBP22.95■■□□□ 1.26
CCDC43-203ENST00000588210 RANGAP1P46060 587 aaPredicted RBP22.94■■□□□ 1.26
CCDC43-203ENST00000588210 EFCAB5A4FU69 1503 aa22.91■■□□□ 1.26
CCDC43-203ENST00000588210 P3H3Q8IVL6 736 aa22.91■■□□□ 1.26
CCDC43-203ENST00000588210 UACAQ9BZF9 1416 aa22.87■■□□□ 1.25
CCDC43-203ENST00000588210 ADCY10Q96PN6 1610 aa22.86■■□□□ 1.25
CCDC43-203ENST00000588210 UHRF1BP1LA0JNW5 1464 aa22.84■■□□□ 1.25
CCDC43-203ENST00000588210 NPM1P06748 294 aaKnown RBP eCLIP22.83■■□□□ 1.25
CCDC43-203ENST00000588210 FHOD3Q2V2M9 1422 aa22.82■■□□□ 1.24
CCDC43-203ENST00000588210 ABCC2Q92887 1545 aa22.81■■□□□ 1.24
CCDC43-203ENST00000588210 ARHGAP35Q9NRY4 1499 aa22.81■■□□□ 1.24
CCDC43-203ENST00000588210 PLB1Q6P1J6 1458 aa22.8■■□□□ 1.24
CCDC43-203ENST00000588210 ABCA8O94911 1581 aa22.79■■□□□ 1.24
CCDC43-203ENST00000588210 CLIP1P30622 1438 aa22.74■■□□□ 1.23
CCDC43-203ENST00000588210 KDM5BQ9UGL1 1544 aa22.73■■□□□ 1.23
CCDC43-203ENST00000588210 ZEB1P37275 1124 aaPredicted RBP22.72■■□□□ 1.23
CCDC43-203ENST00000588210 MAPKBP1O60336 1514 aa22.71■■□□□ 1.23
CCDC43-203ENST00000588210 FMN1Q68DA7 1419 aa22.71■■□□□ 1.23
CCDC43-203ENST00000588210 RAPGEF6Q8TEU7 1601 aa22.7■■□□□ 1.22
CCDC43-203ENST00000588210 CEP162Q5TB80 1403 aa22.68■■□□□ 1.22
CCDC43-203ENST00000588210 TRHP20396 242 aaPredicted RBP22.66■■□□□ 1.22
CCDC43-203ENST00000588210 ZCCHC11Q5TAX3 1644 aaKnown RBP22.66■■□□□ 1.22
CCDC43-203ENST00000588210 NUP153P49790 1475 aaKnown RBP22.62■■□□□ 1.21
CCDC43-203ENST00000588210 ASXL2Q76L83 1435 aa22.61■■□□□ 1.21
CCDC43-203ENST00000588210 ATP10BO94823 1461 aa22.61■■□□□ 1.21
CCDC43-203ENST00000588210 ARID3CA6NKF2 412 aa22.58■■□□□ 1.21
CCDC43-203ENST00000588210 ABCC10Q5T3U5 1492 aa22.58■■□□□ 1.21
CCDC43-203ENST00000588210 HECW1Q76N89 1606 aa22.56■■□□□ 1.2
CCDC43-203ENST00000588210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.54■■□□□ 1.2
CCDC43-203ENST00000588210 HNRNPUL2Q1KMD3 747 aaKnown RBP22.54■■□□□ 1.2
CCDC43-203ENST00000588210 ATP1B4Q9UN42 357 aaPredicted RBP22.54■■□□□ 1.2
CCDC43-203ENST00000588210 CASKIN1Q8WXD9 1431 aa22.54■■□□□ 1.2
CCDC43-203ENST00000588210 FAM69CQ0P6D2 419 aa22.53■■□□□ 1.2
CCDC43-203ENST00000588210 WDR7Q9Y4E6 1490 aa22.53■■□□□ 1.2
CCDC43-203ENST00000588210 DIP2BQ9P265 1576 aa22.53■■□□□ 1.2
CCDC43-203ENST00000588210 KIF13AQ9H1H9 1805 aa22.52■■□□□ 1.19
CCDC43-203ENST00000588210 PCF11O94913 1555 aaKnown RBP22.5■■□□□ 1.19
CCDC43-203ENST00000588210 EPRSP07814 1512 aaKnown RBP22.5■■□□□ 1.19
CCDC43-203ENST00000588210 FYCO1Q9BQS8 1478 aa22.49■■□□□ 1.19
CCDC43-203ENST00000588210 GLI2P10070 1586 aa22.47■■□□□ 1.19
CCDC43-203ENST00000588210 CDK13Q14004 1512 aaKnown RBP22.46■■□□□ 1.19
CCDC43-203ENST00000588210 PLEKHD1A6NEE1 506 aa22.46■■□□□ 1.19
CCDC43-203ENST00000588210 CCDC18Q5T9S5 1454 aa22.44■■□□□ 1.18
CCDC43-203ENST00000588210 KCNH8Q96L42 1107 aa22.44■■□□□ 1.18
CCDC43-203ENST00000588210 CDK11AQ9UQ88 783 aaPredicted RBP22.43■■□□□ 1.18
CCDC43-203ENST00000588210 LRRIQ1Q96JM4 1722 aa22.42■■□□□ 1.18
CCDC43-203ENST00000588210 VPS8Q8N3P4 1428 aa22.4■■□□□ 1.18
CCDC43-203ENST00000588210 MAP3K4Q9Y6R4 1608 aa22.36■■□□□ 1.17
CCDC43-203ENST00000588210 CFAP43Q8NDM7 1665 aa22.33■■□□□ 1.17
CCDC43-203ENST00000588210 TROQ12816 1431 aaPredicted RBP22.32■■□□□ 1.16
CCDC43-203ENST00000588210 ABCA9Q8IUA7 1624 aa22.32■■□□□ 1.16
CCDC43-203ENST00000588210 TSPOAP1O95153 1857 aa22.32■■□□□ 1.16
CCDC43-203ENST00000588210 CD109Q6YHK3 1445 aa22.32■■□□□ 1.16
CCDC43-203ENST00000588210 PPRC1Q5VV67 1664 aaKnown RBP22.27■■□□□ 1.16
CCDC43-203ENST00000588210 MAGI3Q5TCQ9 1506 aa22.27■■□□□ 1.16
CCDC43-203ENST00000588210 TEX14Q8IWB6 1497 aa22.27■■□□□ 1.15
CCDC43-203ENST00000588210 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.26■■□□□ 1.15
CCDC43-203ENST00000588210 KIF14Q15058 1648 aa22.25■■□□□ 1.15
CCDC43-203ENST00000588210 MTUS2Q5JR59 1369 aa22.22■■□□□ 1.15
CCDC43-203ENST00000588210 TIAM1Q13009 1591 aa22.21■■□□□ 1.15
CCDC43-203ENST00000588210 TTC37Q6PGP7 1564 aa22.21■■□□□ 1.15
CCDC43-203ENST00000588210 MAP3K1Q13233 1512 aa22.21■■□□□ 1.15
CCDC43-203ENST00000588210 EHBP1L1Q8N3D4 1523 aa22.17■■□□□ 1.14
CCDC43-203ENST00000588210 APLP2Q06481 763 aa22.17■■□□□ 1.14
CCDC43-203ENST00000588210 PLCH2O75038 1416 aa22.16■■□□□ 1.14
CCDC43-203ENST00000588210 PHLDB1Q86UU1 1377 aa22.14■■□□□ 1.14
CCDC43-203ENST00000588210 MYO5CQ9NQX4 1742 aa22.13■■□□□ 1.13
CCDC43-203ENST00000588210 KDM6BO15054 1643 aa22.13■■□□□ 1.13
CCDC43-203ENST00000588210 LRRC9Q6ZRR7 1453 aa22.13■■□□□ 1.13
CCDC43-203ENST00000588210 NEO1Q92859 1461 aa22.13■■□□□ 1.13
CCDC43-203ENST00000588210 ARAP3Q8WWN8 1544 aa22.12■■□□□ 1.13
CCDC43-203ENST00000588210 FANCAO15360 1455 aa22.11■■□□□ 1.13
CCDC43-203ENST00000588210 CFAP74Q9C0B2 1584 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 445.5 ms