RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 RUSC2Q8N2Y8 1516 aa35.28■■■■□ 3.24
CIRBP-209ENST00000586555 CUL7Q14999 1698 aa35.21■■■■□ 3.23
CIRBP-209ENST00000586555 KIAA0586Q9BVV6 1533 aa35.16■■■■□ 3.22
CIRBP-209ENST00000586555 CARMIL1Q5VZK9 1371 aa35.09■■■■□ 3.21
CIRBP-209ENST00000586555 KIF13AQ9H1H9 1805 aa34.96■■■■□ 3.19
CIRBP-209ENST00000586555 ADCY10Q96PN6 1610 aa34.91■■■■□ 3.18
CIRBP-209ENST00000586555 NPM1P06748 294 aaKnown RBP eCLIP34.88■■■■□ 3.17
CIRBP-209ENST00000586555 MAPKBP1O60336 1514 aa34.86■■■■□ 3.17
CIRBP-209ENST00000586555 ABCC10Q5T3U5 1492 aa34.83■■■■□ 3.17
CIRBP-209ENST00000586555 PTPRGP23470 1445 aa34.8■■■■□ 3.16
CIRBP-209ENST00000586555 IQGAP2Q13576 1575 aa34.79■■■■□ 3.16
CIRBP-209ENST00000586555 FAM69CQ0P6D2 419 aa34.77■■■■□ 3.16
CIRBP-209ENST00000586555 CARMIL2Q6F5E8 1435 aa34.77■■■■□ 3.16
CIRBP-209ENST00000586555 RAPGEF2Q9Y4G8 1499 aa34.77■■■■□ 3.16
CIRBP-209ENST00000586555 TNIKQ9UKE5 1360 aa34.76■■■■□ 3.16
CIRBP-209ENST00000586555 DIP2BQ9P265 1576 aa34.71■■■■□ 3.15
CIRBP-209ENST00000586555 DISP1Q96F81 1524 aa34.68■■■■□ 3.14
CIRBP-209ENST00000586555 UGGT2Q9NYU1 1516 aa34.63■■■■□ 3.13
CIRBP-209ENST00000586555 TTBK1Q5TCY1 1321 aaPredicted RBP34.62■■■■□ 3.13
CIRBP-209ENST00000586555 ABCC2Q92887 1545 aa34.6■■■■□ 3.13
CIRBP-209ENST00000586555 UHRF1BP1LA0JNW5 1464 aa34.58■■■■□ 3.13
CIRBP-209ENST00000586555 UACAQ9BZF9 1416 aa34.55■■■■□ 3.12
CIRBP-209ENST00000586555 AEBP2Q6ZN18 517 aaPredicted RBP34.51■■■■□ 3.12
CIRBP-209ENST00000586555 EEA1Q15075 1411 aa34.49■■■■□ 3.11
CIRBP-209ENST00000586555 KIAA0556O60303 1618 aa34.49■■■■□ 3.11
CIRBP-209ENST00000586555 CSRNP3Q8WYN3 585 aa34.49■■■■□ 3.11
CIRBP-209ENST00000586555 PRXQ9BXM0 1461 aa34.48■■■■□ 3.11
CIRBP-209ENST00000586555 ASXL2Q76L83 1435 aa34.47■■■■□ 3.11
CIRBP-209ENST00000586555 PLB1Q6P1J6 1458 aa34.46■■■■□ 3.11
CIRBP-209ENST00000586555 TSPOAP1O95153 1857 aa34.46■■■■□ 3.11
CIRBP-209ENST00000586555 CTTNBP2Q8WZ74 1663 aa34.45■■■■□ 3.11
CIRBP-209ENST00000586555 CHIC1Q5VXU3 224 aa34.44■■■■□ 3.1
CIRBP-209ENST00000586555 KDM5BQ9UGL1 1544 aa34.42■■■■□ 3.1
CIRBP-209ENST00000586555 GLI2P10070 1586 aa34.4■■■■□ 3.1
CIRBP-209ENST00000586555 KDM6BO15054 1643 aa34.34■■■■□ 3.09
CIRBP-209ENST00000586555 GOLGA3Q08378 1498 aa34.33■■■■□ 3.09
CIRBP-209ENST00000586555 ZCCHC11Q5TAX3 1644 aaKnown RBP34.3■■■■□ 3.08
CIRBP-209ENST00000586555 FAM9AQ8IZU1 332 aaPredicted RBP34.3■■■■□ 3.08
CIRBP-209ENST00000586555 PPRC1Q5VV67 1664 aaKnown RBP34.28■■■■□ 3.08
CIRBP-209ENST00000586555 EPRSP07814 1512 aaKnown RBP34.27■■■■□ 3.08
CIRBP-209ENST00000586555 ABCA8O94911 1581 aa34.2■■■■□ 3.07
CIRBP-209ENST00000586555 MAP3K4Q9Y6R4 1608 aa34.18■■■■□ 3.06
CIRBP-209ENST00000586555 WDR7Q9Y4E6 1490 aa34.14■■■■□ 3.06
CIRBP-209ENST00000586555 KIF21BO75037 1637 aa34.08■■■■□ 3.05
CIRBP-209ENST00000586555 COL17A1Q9UMD9 1497 aaPredicted RBP34.07■■■■□ 3.04
CIRBP-209ENST00000586555 TEX14Q8IWB6 1497 aa34.05■■■■□ 3.04
CIRBP-209ENST00000586555 KDM4FA0A1W2PPD8 638 aa34.04■■■■□ 3.04
CIRBP-209ENST00000586555 P3H3Q8IVL6 736 aa34.02■■■■□ 3.04
CIRBP-209ENST00000586555 SAMD9Q5K651 1589 aa34■■■■□ 3.03
CIRBP-209ENST00000586555 KCNH8Q96L42 1107 aa33.96■■■■□ 3.03
CIRBP-209ENST00000586555 CFAP43Q8NDM7 1665 aa33.94■■■■□ 3.02
CIRBP-209ENST00000586555 MAGI3Q5TCQ9 1506 aa33.94■■■■□ 3.02
CIRBP-209ENST00000586555 CD109Q6YHK3 1445 aa33.93■■■■□ 3.02
CIRBP-209ENST00000586555 ATP10BO94823 1461 aa33.93■■■■□ 3.02
CIRBP-209ENST00000586555 UBTFP17480 764 aaKnown RBP33.91■■■■□ 3.02
CIRBP-209ENST00000586555 RANGAP1P46060 587 aaPredicted RBP33.88■■■■□ 3.01
CIRBP-209ENST00000586555 EHMT2Q96KQ7 1210 aa33.85■■■■□ 3.01
CIRBP-209ENST00000586555 ARID3CA6NKF2 412 aa33.83■■■■□ 3.01
CIRBP-209ENST00000586555 RAPGEF6Q8TEU7 1601 aa33.82■■■■□ 3.01
CIRBP-209ENST00000586555 EFCAB5A4FU69 1503 aa33.75■■■□□ 2.99
CIRBP-209ENST00000586555 FHOD3Q2V2M9 1422 aa33.74■■■□□ 2.99
CIRBP-209ENST00000586555 ADGRL1O94910 1474 aa33.72■■■□□ 2.99
CIRBP-209ENST00000586555 NUP153P49790 1475 aaKnown RBP33.72■■■□□ 2.99
CIRBP-209ENST00000586555 ABCA9Q8IUA7 1624 aa33.71■■■□□ 2.99
CIRBP-209ENST00000586555 ARAP3Q8WWN8 1544 aa33.67■■■□□ 2.98
CIRBP-209ENST00000586555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.63■■■□□ 2.97
CIRBP-209ENST00000586555 HNRNPUL2Q1KMD3 747 aaKnown RBP33.63■■■□□ 2.97
CIRBP-209ENST00000586555 PHLDB1Q86UU1 1377 aa33.62■■■□□ 2.97
CIRBP-209ENST00000586555 PLEKHD1A6NEE1 506 aa33.54■■■□□ 2.96
CIRBP-209ENST00000586555 NEO1Q92859 1461 aa33.53■■■□□ 2.96
CIRBP-209ENST00000586555 FMN1Q68DA7 1419 aa33.49■■■□□ 2.95
CIRBP-209ENST00000586555 ARHGAP35Q9NRY4 1499 aa33.49■■■□□ 2.95
CIRBP-209ENST00000586555 RAPGEF3O95398 923 aa33.43■■■□□ 2.94
CIRBP-209ENST00000586555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.39■■■□□ 2.94
CIRBP-209ENST00000586555 ATP1B4Q9UN42 357 aaPredicted RBP33.37■■■□□ 2.93
CIRBP-209ENST00000586555 CDK13Q14004 1512 aaKnown RBP33.37■■■□□ 2.93
CIRBP-209ENST00000586555 FRMPD1Q5SYB0 1578 aa33.36■■■□□ 2.93
CIRBP-209ENST00000586555 AKNAQ7Z591 1439 aa33.32■■■□□ 2.92
CIRBP-209ENST00000586555 TTC37Q6PGP7 1564 aa33.31■■■□□ 2.92
CIRBP-209ENST00000586555 HECW1Q76N89 1606 aa33.31■■■□□ 2.92
CIRBP-209ENST00000586555 FANCAO15360 1455 aa33.3■■■□□ 2.92
CIRBP-209ENST00000586555 CLIP1P30622 1438 aa33.28■■■□□ 2.92
CIRBP-209ENST00000586555 DENND4BO75064 1496 aaPredicted RBP33.27■■■□□ 2.92
CIRBP-209ENST00000586555 CFAP74Q9C0B2 1584 aa33.26■■■□□ 2.92
CIRBP-209ENST00000586555 RICTORQ6R327 1708 aa33.26■■■□□ 2.92
CIRBP-209ENST00000586555 CDK11AQ9UQ88 783 aaPredicted RBP33.24■■■□□ 2.91
CIRBP-209ENST00000586555 ADAMTSL3P82987 1691 aa33.22■■■□□ 2.91
CIRBP-209ENST00000586555 HECW2Q9P2P5 1572 aa33.21■■■□□ 2.91
CIRBP-209ENST00000586555 PLCH2O75038 1416 aa33.21■■■□□ 2.91
CIRBP-209ENST00000586555 CASKIN1Q8WXD9 1431 aa33.15■■■□□ 2.9
CIRBP-209ENST00000586555 BCORL1Q5H9F3 1711 aa33.14■■■□□ 2.9
CIRBP-209ENST00000586555 ARHGEF40Q8TER5 1519 aa33.14■■■□□ 2.9
CIRBP-209ENST00000586555 ZMYM4Q5VZL5 1548 aa33.13■■■□□ 2.89
CIRBP-209ENST00000586555 LRRIQ1Q96JM4 1722 aa33.13■■■□□ 2.89
CIRBP-209ENST00000586555 PTPRMP28827 1452 aa33.11■■■□□ 2.89
CIRBP-209ENST00000586555 TROQ12816 1431 aaPredicted RBP33.11■■■□□ 2.89
CIRBP-209ENST00000586555 ARID4BQ4LE39 1312 aaPredicted RBP33.09■■■□□ 2.89
CIRBP-209ENST00000586555 SCAPERQ9BY12 1400 aa33.09■■■□□ 2.89
CIRBP-209ENST00000586555 MYO5CQ9NQX4 1742 aa33.08■■■□□ 2.89
CIRBP-209ENST00000586555 CCDC18Q5T9S5 1454 aa33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms