RNA–Protein interactions for RNA: ENST00000586544.1

ILF3-205, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best)

Gene ILF3, Length 3,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-205ENST00000586544 FAM9BQ8IZU0 186 aa14.38□□□□□ -0.11
ILF3-205ENST00000586544 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
ILF3-205ENST00000586544 GOLGA3Q08378 1498 aa14.35□□□□□ -0.11
ILF3-205ENST00000586544 CDK11AQ9UQ88 783 aaPredicted RBP14.35□□□□□ -0.11
ILF3-205ENST00000586544 ATAD2BQ9ULI0 1458 aa14.33□□□□□ -0.12
ILF3-205ENST00000586544 SIN3AQ96ST3 1273 aa14.32□□□□□ -0.12
ILF3-205ENST00000586544 TONSLQ96HA7 1378 aa14.32□□□□□ -0.12
ILF3-205ENST00000586544 GLIPR1L2Q4G1C9 344 aa14.32□□□□□ -0.12
ILF3-205ENST00000586544 RTN4Q9NQC3 1192 aaKnown RBP14.31□□□□□ -0.12
ILF3-205ENST00000586544 CLSPNQ9HAW4 1339 aa14.3□□□□□ -0.12
ILF3-205ENST00000586544 RRP7BPQ9NSQ0 103 aa14.27□□□□□ -0.13
ILF3-205ENST00000586544 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.13
ILF3-205ENST00000586544 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
ILF3-205ENST00000586544 A0A0U1RQG5 324 aaPredicted RBP14.24□□□□□ -0.13
ILF3-205ENST00000586544 NPM2Q86SE8 214 aaKnown RBP14.23□□□□□ -0.13
ILF3-205ENST00000586544 KANK4Q5T7N3 995 aaPredicted RBP14.22□□□□□ -0.13
ILF3-205ENST00000586544 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
ILF3-205ENST00000586544 SYNJ1O43426 1573 aa14.21□□□□□ -0.13
ILF3-205ENST00000586544 DEKP35659 375 aaKnown RBP14.2□□□□□ -0.14
ILF3-205ENST00000586544 TSHZ2Q9NRE2 1034 aa14.18□□□□□ -0.14
ILF3-205ENST00000586544 KDM2AQ9Y2K7 1162 aa14.18□□□□□ -0.14
ILF3-205ENST00000586544 MRS2Q9HD23 443 aa14.17□□□□□ -0.14
ILF3-205ENST00000586544 MTUS2Q5JR59 1369 aa14.16□□□□□ -0.14
ILF3-205ENST00000586544 RAPGEF2Q9Y4G8 1499 aa14.15□□□□□ -0.14
ILF3-205ENST00000586544 SUPT16HQ9Y5B9 1047 aaKnown RBP14.13□□□□□ -0.15
ILF3-205ENST00000586544 VPS8Q8N3P4 1428 aa14.12□□□□□ -0.15
ILF3-205ENST00000586544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.15
ILF3-205ENST00000586544 NBR1Q14596 966 aa14.11□□□□□ -0.15
ILF3-205ENST00000586544 PDE4CQ08493 712 aa14.1□□□□□ -0.15
ILF3-205ENST00000586544 ERICH6BQ5W0A0 696 aa14.09□□□□□ -0.15
ILF3-205ENST00000586544 KCNH8Q96L42 1107 aa14.09□□□□□ -0.15
ILF3-205ENST00000586544 KIF21BO75037 1637 aa14.09□□□□□ -0.15
ILF3-205ENST00000586544 SENP3Q9H4L4 574 aaPredicted RBP14.08□□□□□ -0.16
ILF3-205ENST00000586544 TMC1Q8TDI8 760 aa14.08□□□□□ -0.16
ILF3-205ENST00000586544 EIF4G2P78344 907 aaKnown RBP eCLIP14.04□□□□□ -0.16
ILF3-205ENST00000586544 VSIG10Q8N0Z9 540 aa14.03□□□□□ -0.16
ILF3-205ENST00000586544 ANP32AP39687 249 aaKnown RBP14.03□□□□□ -0.16
ILF3-205ENST00000586544 KIF27Q86VH2 1401 aa14.03□□□□□ -0.16
ILF3-205ENST00000586544 NCAPD3P42695 1498 aa14.02□□□□□ -0.16
ILF3-205ENST00000586544 RGL3Q3MIN7 710 aa14.02□□□□□ -0.17
ILF3-205ENST00000586544 TOP2BQ02880 1626 aa14.01□□□□□ -0.17
ILF3-205ENST00000586544 CCNB3Q8WWL7 1395 aa14.01□□□□□ -0.17
ILF3-205ENST00000586544 FOXD1Q16676 465 aa14□□□□□ -0.17
ILF3-205ENST00000586544 CHGAP10645 457 aaKnown RBP14□□□□□ -0.17
ILF3-205ENST00000586544 CANXP27824 592 aaKnown RBP13.99□□□□□ -0.17
ILF3-205ENST00000586544 PDIA4P13667 645 aaKnown RBP13.98□□□□□ -0.17
ILF3-205ENST00000586544 B4GALNT3Q6L9W6 998 aa13.95□□□□□ -0.18
ILF3-205ENST00000586544 HMGXB3Q12766 1538 aa13.94□□□□□ -0.18
ILF3-205ENST00000586544 TSPY4P0CV99 314 aa13.93□□□□□ -0.18
ILF3-205ENST00000586544 TSPY10P0CW01 314 aa13.93□□□□□ -0.18
ILF3-205ENST00000586544 PRXQ9BXM0 1461 aa13.93□□□□□ -0.18
ILF3-205ENST00000586544 CUX1P39880 1505 aa13.93□□□□□ -0.18
ILF3-205ENST00000586544 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
ILF3-205ENST00000586544 TIMELESSQ9UNS1 1208 aa13.91□□□□□ -0.18
ILF3-205ENST00000586544 CFTRP13569 1480 aa13.91□□□□□ -0.18
ILF3-205ENST00000586544 RBM19Q9Y4C8 960 aaKnown RBP13.91□□□□□ -0.18
ILF3-205ENST00000586544 CUX2O14529 1486 aa13.9□□□□□ -0.18
ILF3-205ENST00000586544 AEBP2Q6ZN18 517 aaPredicted RBP13.9□□□□□ -0.18
ILF3-205ENST00000586544 CARMIL1Q5VZK9 1371 aa13.89□□□□□ -0.19
ILF3-205ENST00000586544 RAB3GAP2Q9H2M9 1393 aa13.89□□□□□ -0.19
ILF3-205ENST00000586544 ERICH3Q5RHP9 1530 aa13.89□□□□□ -0.19
ILF3-205ENST00000586544 BIVM-ERCC5R4GMW8 1640 aa13.89□□□□□ -0.19
ILF3-205ENST00000586544 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
ILF3-205ENST00000586544 ARXQ96QS3 562 aa13.88□□□□□ -0.19
ILF3-205ENST00000586544 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
ILF3-205ENST00000586544 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
ILF3-205ENST00000586544 CADPSQ9ULU8 1353 aa13.86□□□□□ -0.19
ILF3-205ENST00000586544 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
ILF3-205ENST00000586544 IL27Q8NEV9 243 aa13.83□□□□□ -0.2
ILF3-205ENST00000586544 CARD11Q9BXL7 1154 aa13.82□□□□□ -0.2
ILF3-205ENST00000586544 HSPA5P11021 654 aaKnown RBP13.82□□□□□ -0.2
ILF3-205ENST00000586544 IGF1RP08069 1367 aa13.82□□□□□ -0.2
ILF3-205ENST00000586544 ZMYND15Q9H091 742 aa13.82□□□□□ -0.2
ILF3-205ENST00000586544 BCL11BQ9C0K0 894 aaPredicted RBP13.81□□□□□ -0.2
ILF3-205ENST00000586544 SETD5Q9C0A6 1442 aa13.8□□□□□ -0.2
ILF3-205ENST00000586544 DHX57Q6P158 1386 aaKnown RBP13.8□□□□□ -0.2
ILF3-205ENST00000586544 PPP1R15AO75807 674 aaPredicted RBP13.8□□□□□ -0.2
ILF3-205ENST00000586544 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
ILF3-205ENST00000586544 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
ILF3-205ENST00000586544 ARHGAP35Q9NRY4 1499 aa13.79□□□□□ -0.2
ILF3-205ENST00000586544 PLEKHD1A6NEE1 506 aa13.78□□□□□ -0.2
ILF3-205ENST00000586544 WDR43Q15061 677 aaKnown RBP eCLIP13.78□□□□□ -0.2
ILF3-205ENST00000586544 FGD5Q6ZNL6 1462 aa13.77□□□□□ -0.21
ILF3-205ENST00000586544 NEUROD2Q15784 382 aa13.76□□□□□ -0.21
ILF3-205ENST00000586544 CC2D1BQ5T0F9 858 aaKnown RBP13.76□□□□□ -0.21
ILF3-205ENST00000586544 DCAF11Q8TEB1 546 aa13.75□□□□□ -0.21
ILF3-205ENST00000586544 LAS1LQ9Y4W2 734 aaKnown RBP13.73□□□□□ -0.21
ILF3-205ENST00000586544 PPP4R2Q9NY27 417 aa13.73□□□□□ -0.21
ILF3-205ENST00000586544 TNNT2P45379 298 aaPredicted RBP13.72□□□□□ -0.21
ILF3-205ENST00000586544 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
ILF3-205ENST00000586544 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
ILF3-205ENST00000586544 RRBP1Q9P2E9 1410 aaKnown RBP13.71□□□□□ -0.21
ILF3-205ENST00000586544 FHOD3Q2V2M9 1422 aa13.71□□□□□ -0.21
ILF3-205ENST00000586544 FHAD1B1AJZ9 1412 aa13.7□□□□□ -0.22
ILF3-205ENST00000586544 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
ILF3-205ENST00000586544 RGS3P49796 1198 aa13.69□□□□□ -0.22
ILF3-205ENST00000586544 CCER2I3L3R5 266 aa13.68□□□□□ -0.22
ILF3-205ENST00000586544 NEFMP07197 916 aa13.68□□□□□ -0.22
ILF3-205ENST00000586544 PKD2Q13563 968 aa13.68□□□□□ -0.22
ILF3-205ENST00000586544 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms